RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJDB14274" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB14274 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
980948 980948 PRJDB14274_S_NODE_9421_length_208_cov_0.884354_g9343_i0 PRJDB14274 9421 208 0.884354 1.83945632 Metazoa 33208 Platyhelminthes Platyhelminthes 62.1 3.03e-5   NTclustered gi|690882270|emb|LN386135.1| 99802 g9343 i0 97.222 3.87019230769231 36 1 17 0 156 191 554 519 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0238388 blastn 805 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
11486470 11486470 PRJDB14274_S_NODE_6830_length_242_cov_1.381215_g6752_i0 PRJDB14274 6830 242 1.381215 3.3425403 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|687163270|emb|LN038880.1| 99802 g6752 i0 100 0.115702479338843 28 0 12 0 106 133 741 768 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0037985 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
17558864 17558864 PRJDB14274_S_NODE_10654_length_174_cov_6.522124_g10576_i0 PRJDB14274 10654 174 6.522124 11.34849576 Metazoa 33208 Platyhelminthes Platyhelminthes 198 1.78e-46   NTclustered gi|684409700|ref|XM_009177569.1| 6198 g10576 i0 87.647 99.2701149425287 170 21 98 0 3 172 205 374 Opisthorchis viverrini hypothetical protein partial mRNA blastn 17273 200 0.99 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;