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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJDB14274" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB14274 · 26 ✖

analysis 1

  • blastn · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8549 8549 PRJDB14274_S_NODE_1761_length_456_cov_10.741772_g1683_i0 PRJDB14274 1761 456 10.741772 48.98248032 Trichinella spiralis 6334 Nematoda Nematoda 161 7.04e-35   NTclustered gi|1938390596|gb|MW302146.1| 6334 g1683 i0 90.833 24.5899122807018 120 11 26 0 336 455 6239 6358 Trichinella spiralis isolate Europe-Poland-22D20-B small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11213 161 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
1282798 1282798 PRJDB14274_S_NODE_3882_length_311_cov_2.180000_g3804_i0 PRJDB14274 3882 311 2.18 6.7798 Trichinella spiralis 6334 Nematoda Nematoda 254 7.42e-63   NTclustered gi|339252409|ref|XM_003371380.1| 6334 g3804 i0 81.35 1 311 58 100 0 1 311 325 15 Trichinella spiralis troponin C, isoform 2 (Tsp_11636) mRNA, complete cds blastn 311 254 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
1282822 1282822 PRJDB14274_S_NODE_802_length_662_cov_10.500832_g730_i0 PRJDB14274 802 662 10.500832 69.51550784 Capillaria sp. ALS-2019 2651741 Nematoda Nematoda 176 3.75e-39   NTclustered gi|1811126246|gb|MN526255.1| 2651741 g730 i0 92.063 49.2447129909366 126 9 19 1 1 125 218 343 Capillaria sp. ALS-2019 large subunit ribosomal RNA gene, partial sequence blastn 32600 176 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. ALS-2019
2558395 2558395 PRJDB14274_S_NODE_103_length_1522_cov_23.106776_g88_i0 PRJDB14274 103 1522 23.106776 351.68513072 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2643 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g88 i0 98.152 47.5709592641262 1515 28 99 0 8 1522 7188 5674 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 72403 2643 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
2558427 2558427 PRJDB14274_S_NODE_7203_length_236_cov_1.440000_g7125_i0 PRJDB14274 7203 236 1.44 3.3984 Ancylostoma caninum 29170 Nematoda Nematoda 99 2.68e-16   NTclustered gi|86160923|gb|DQ358106.1| 29170 g7125 i0 74.783 0.974576271186441 230 52 96 6 10 236 1415 1189 Ancylostoma caninum paramyosin mRNA, complete cds blastn 230 99 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
3834698 3834698 PRJDB14274_S_NODE_1064_length_582_cov_4.852207_g989_i0 PRJDB14274 1064 582 4.852207 28.23984474 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1016 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g989 i0 98.276 48.1288659793814 580 10 99 0 1 580 1101 522 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 28011 1016 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
3834743 3834743 PRJDB14274_S_NODE_9224_length_209_cov_2.222973_g9146_i0 PRJDB14274 9224 209 2.222973 4.64601357 Trichinella spiralis 6334 Nematoda Nematoda 196 8e-46   NTclustered gi|339233103|ref|XM_003381621.1| 6334 g9146 i0 83.902 73.6076555023923 205 33 98 0 1 205 787 583 Trichinella spiralis syntaxin-1A (Tsp_07354) mRNA, complete cds blastn 15384 196 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
5110955 5110955 PRJDB14274_S_NODE_1345_length_521_cov_9.934783_g1269_i0 PRJDB14274 1345 521 9.934783 51.76021943 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 880 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1269 i0 97.121 34.7850287907869 521 15 100 0 1 521 4397 4917 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 18123 880 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
5110960 5110960 PRJDB14274_S_NODE_2065_length_424_cov_1.895317_g1987_i0 PRJDB14274 2065 424 1.895317 8.03614408 Trichinella spiralis 6334 Nematoda Nematoda 235 3.78e-57   NTclustered gi|339246888|ref|XM_003375030.1| 6334 g1987 i0 87.685 0.47877358490566 203 24 48 1 223 424 897 695 Trichinella spiralis putative LIM domain protein (Tsp_04264) mRNA, complete cds blastn 203 235 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
5110979 5110979 PRJDB14274_S_NODE_565_length_785_cov_3.654696_g509_i0 PRJDB14274 565 785 3.654696 28.6893636 Trichinella spiralis 6334 Nematoda Nematoda 436 1.86e-117   NTclustered gi|339254111|ref|XM_003372231.1| 6334 g509 i0 79.833 79.312101910828 600 119 76 2 183 781 1 599 Trichinella spiralis moesin/ezrin/radixin protein (Tsp_10541) mRNA, complete cds blastn 62260 436 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
7660871 7660871 PRJDB14274_S_NODE_7487_length_231_cov_3.394118_g7409_i0 PRJDB14274 7487 231 3.394118 7.84041258 Trichinella spiralis 6334 Nematoda Nematoda 200 6.969999999999999e-47   NTclustered gi|339240906|ref|XM_003376331.1| 6334 g7409 i0 82.328 10.6406926406926 232 39 100 2 1 231 2030 2260 Trichinella spiralis zinc finger protein (Tsp_00587) mRNA, complete cds blastn 2458 200 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
8935518 8935518 PRJDB14274_S_NODE_2108_length_420_cov_11.272981_g2030_i0 PRJDB14274 2108 420 11.272981 47.3465202 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 734 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g2030 i0 99.504 87.3166666666667 403 2 96 0 1 403 403 1 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 36673 734 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8935535 8935535 PRJDB14274_S_NODE_528_length_810_cov_7.064085_g476_i0 PRJDB14274 528 810 7.064085 57.2190885 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1452 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g476 i0 99.012 1.36049382716049 810 8 100 0 1 810 8031 8840 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1102 1452 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
11486460 11486460 PRJDB14274_S_NODE_530_length_809_cov_2.950535_g478_i0 PRJDB14274 530 809 2.950535 23.86982815 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1356 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g478 i0 96.91 2.1433868974042 809 25 100 0 1 809 11437 10629 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1734 1356 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
11486478 11486478 PRJDB14274_S_NODE_970_length_611_cov_1.712727_g895_i0 PRJDB14274 970 611 1.712727 10.46476197 Trichinella spiralis 6334 Nematoda Nematoda 472 3.92e-128   NTclustered gi|339242972|ref|XM_003377364.1| 6334 g895 i0 82.182 7.88216039279869 550 96 90 2 59 607 3531 2983 Trichinella spiralis ATP-dependent RNA helicase DHX8 (Tsp_01590) mRNA, complete cds blastn 4816 472 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
12460132 12460132 PRJDB14274_S_NODE_10050_length_203_cov_1.830986_g9972_i0 PRJDB14274 10050 203 1.830986 3.71690158 Metazoa 33208 Nematoda Nematoda 159 1.01e-34   NTclustered gi|339254651|ref|XM_003372501.1| 6334 g9972 i0 81.218 19.512315270936 197 37 97 0 3 199 472 668 Trichinella spiralis hypothetical protein (Tsp_10306) mRNA, complete cds blastn 3961 159 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
12460142 12460142 PRJDB14274_S_NODE_4430_length_293_cov_5.737069_g4352_i0 PRJDB14274 4430 293 5.737069 16.80961217 Capillaria 119095 Nematoda Nematoda 117 9.5e-22   NTclustered gi|661349433|gb|KJ579529.1| 1503235 g4352 i0 91.765 26.2116040955631 85 5 51 2 1 83 824 740 Capillaria sp. 104CSP_D 28S ribosomal RNA gene, partial sequence blastn 7680 117 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. 104CSP_D
12762073 12762073 PRJDB14274_S_NODE_2471_length_389_cov_4.185976_g2393_i0 PRJDB14274 2471 389 4.185976 16.28344664 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 680 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g2393 i0 98.201 7.44987146529563 389 7 100 0 1 389 12342 12730 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 2898 680 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
14036603 14036603 PRJDB14274_S_NODE_2232_length_409_cov_4.123563_g2154_i0 PRJDB14274 2232 409 4.123563 16.86537267 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 712 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g2154 i0 98.044 9.2958435207824 409 8 100 0 1 409 1475 1067 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 3802 712 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
14036626 14036626 PRJDB14274_S_NODE_9532_length_207_cov_1.335616_g9454_i0 PRJDB14274 9532 207 1.335616 2.76472512 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 344 2.67e-90   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g9454 i0 96.618 1 207 7 100 0 1 207 9874 9668 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 207 344 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
16585364 16585364 PRJDB14274_S_NODE_2274_length_405_cov_1.351744_g2196_i0 PRJDB14274 2274 405 1.351744 5.4745632 Trichinella pseudospiralis 6337 Nematoda Nematoda 243 2.15e-59   NTclustered gi|17646750|gb|AF453521.1|AF453521 6337 g2196 i0 81.481 4.33827160493827 297 54 73 1 18 314 296 1 Trichinella pseudospiralis tropomyosin mRNA, complete cds blastn 1757 243 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
16585371 16585371 PRJDB14274_S_NODE_3434_length_330_cov_11.211896_g3356_i0 PRJDB14274 3434 330 11.211896 36.9992568 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 604 1.8999999999999996e-168   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g3356 i0 99.697 98.0666666666667 330 1 100 0 1 330 892 563 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 32362 604 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
16585392 16585392 PRJDB14274_S_NODE_914_length_626_cov_24.157522_g840_i0 PRJDB14274 914 626 24.157522 151.22608772 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1088 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g840 i0 98.697 2.4776357827476 614 7 98 1 10 622 7886 7273 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1551 1088 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
21685124 21685124 PRJDB14274_S_NODE_2498_length_387_cov_5.472393_g2420_i0 PRJDB14274 2498 387 5.472393 21.17816091 Pearsonema plica 2025202 Nematoda Nematoda 243 2.04e-59   NTclustered gi|585724675|gb|KF836607.1| 2025202 g2420 i0 92.398 19.5090439276486 171 11 44 2 108 277 1997 2166 Capillaria plica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7550 243 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pearsonema Pearsonema plica
21685138 21685138 PRJDB14274_S_NODE_478_length_862_cov_40.350811_g431_i0 PRJDB14274 478 862 40.350811 347.82399082 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1552 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g431 i0 99.531 53.0232018561485 853 2 99 2 1 852 2426 3277 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 45706 1552 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
22960481 22960481 PRJDB14274_S_NODE_3199_length_342_cov_9.195730_g3121_i0 PRJDB14274 3199 342 9.19573 31.4493966 Aonchotheca paranalis 2025203 Nematoda Nematoda 462 1.2599999999999998e-125   NTclustered gi|1279640587|gb|MF621021.1| 2025203 g3121 i0 91.176 31.5409356725146 340 30 99 0 3 342 3555 3894 Aonchotheca paranalis isolate PL 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10787 462 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Aonchotheca Aonchotheca paranalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;