RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJDB14274" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB14274 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16585354 16585354 PRJDB14274_S_NODE_10234_length_202_cov_1.120567_g10156_i0 PRJDB14274 10234 202 1.120567 2.26354534 Diadema antillarum 105358 Echinodermata other_Eukaryota 54.7 0.005   NTclustered gi|2919441174|ref|XM_071638947.1| 105358 g10156 i0 100 1.14356435643564 29 0 14 0 113 141 526 498 PREDICTED: Diadema antillarum marginal zone B- and B1-cell-specific protein-like (LOC139727976), mRNA blastn 231 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
17860402 17860402 PRJDB14274_S_NODE_6175_length_253_cov_1.151042_g6097_i0 PRJDB14274 6175 253 1.151042 2.91213626 Diadema antillarum 105358 Echinodermata other_Eukaryota 67.6 8.2e-7   NTclustered gi|2919480452|ref|XM_071645794.1| 105358 g6097 i0 100 12.9367588932806 36 0 14 0 9 44 10601 10566 PREDICTED: Diadema antillarum helicase domino-like (LOC139735020), mRNA blastn 3273 67.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;