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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJDB14274" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB14274 · 23 ✖

analysis 1

  • blastn · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8575 8575 PRJDB14274_S_NODE_6081_length_254_cov_2.694301_g6003_i0 PRJDB14274 6081 254 2.694301 6.84352454 Petromyzon marinus 7757 Chordata Chordata 67.6 8.24e-7   NTclustered gi|1822369067|ref|XM_032952085.1| 7757 g6003 i0 93.478 9.54724409448819 46 1 18 2 142 186 1598 1642 PREDICTED: Petromyzon marinus cytoplasmic polyadenylation element binding protein 3 (CPEB3), transcript variant X3, mRNA blastn 2425 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
1282785 1282785 PRJDB14274_S_NODE_2482_length_388_cov_2.461774_g2404_i0 PRJDB14274 2482 388 2.461774 9.55168312 Astur gentilis 8957 Chordata Chordata 54.7 0.01   NTclustered gi|2280336877|ref|XM_049822066.1| 8957 g2404 i0 100 0.448453608247423 29 0 7 0 172 200 4747 4719 PREDICTED: Accipiter gentilis transcription factor 20 (TCF20), transcript variant X6, mRNA blastn 174 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Accipitriformes Accipitridae Astur Astur gentilis
1282807 1282807 PRJDB14274_S_NODE_4982_length_279_cov_1.178899_g4904_i0 PRJDB14274 4982 279 1.178899 3.28912821 Petromyzon marinus 7757 Chordata Chordata 289 1.8e-73   NTclustered gi|1822420282|ref|XM_032947438.1| 7757 g4904 i0 85.357 78.2222222222222 280 39 100 2 1 279 5084 4806 PREDICTED: Petromyzon marinus pre-mRNA processing factor 8 (PRPF8), transcript variant X1, mRNA blastn 21824 289 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
2256217 2256217 PRJDB14274_S_NODE_4542_length_290_cov_4.323144_g4464_i0 PRJDB14274 4542 290 4.323144 12.5371176 Opisthokonta 33154 Chordata Chordata 56.5 0.002   NTclustered gi|1981786811|ref|XM_039404841.1| 7725 g4464 i0 100 1.50689655172414 30 0 10 0 261 290 5571 5600 PREDICTED: Styela clava formin-like (LOC120337120), mRNA blastn 437 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
2558414 2558414 PRJDB14274_S_NODE_4043_length_306_cov_1.546939_g3965_i0 PRJDB14274 4043 306 1.546939 4.73363334 Heterodontus francisci 7792 Chordata Chordata 139 2.13e-28   NTclustered gi|2795504559|ref|XM_068041974.1| 7792 g3965 i0 86.508 5.19934640522876 126 17 41 0 112 237 1966 1841 PREDICTED: Heterodontus francisci electron transfer flavoprotein dehydrogenase (etfdh), mRNA blastn 1591 139 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Heterodontiformes Heterodontidae Heterodontus Heterodontus francisci
3531602 3531602 PRJDB14274_S_NODE_8683_length_215_cov_2.097403_g8605_i0 PRJDB14274 8683 215 2.097403 4.50941645 Petromyzontidae 7746 Chordata Chordata 148 2.35e-31   NTclustered gi|2635841747|ref|XM_061557680.1| 7753 g8605 i0 79.904 9.34418604651163 209 36 96 5 10 215 2523 2728 PREDICTED: Lethenteron reissneri DEAD-box helicase 23 (DDX23), transcript variant X1, mRNA blastn 2009 148 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lethenteron Lethenteron reissneri
3834731 3834731 PRJDB14274_S_NODE_4804_length_283_cov_1.554054_g4726_i0 PRJDB14274 4804 283 1.554054 4.39797282 Pseudonaja textilis 8673 Chordata Chordata 110 1.53e-19   NTclustered gi|1488392159|ref|XM_026720583.1| 8673 g4726 i0 81.343 4.04946996466431 134 25 47 0 3 136 222 355 PREDICTED: Pseudonaja textilis histone H4 (LOC113449467), mRNA blastn 1146 110 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Pseudonaja Pseudonaja textilis
3834732 3834732 PRJDB14274_S_NODE_5084_length_276_cov_5.613953_g5006_i0 PRJDB14274 5084 276 5.613953 15.49451028 Trachemys scripta 34903 Chordata Chordata 84.2 9e-12   NTclustered gi|1846721661|ref|XM_034759611.1| 31138 g5006 i0 92.982 18.036231884058 57 4 21 0 220 276 2321 2377 PREDICTED: Trachemys scripta elegans uncharacterized LOC117871856 (LOC117871856), transcript variant X2, mRNA blastn 4978 84.2 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Emydidae Trachemys Trachemys scripta
3834738 3834738 PRJDB14274_S_NODE_6804_length_242_cov_3.187845_g6726_i0 PRJDB14274 6804 242 3.187845 7.7145849 Mus musculus 10090 Chordata Chordata 56.5 0.002   NTclustered gi|354796471|gb|JN960972.1| 10090 g6726 i0 100 0.743801652892562 30 0 12 0 61 90 11138 11167 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Gpr182:tm2e(KOMP)Wtsi; transgenic blastn 180 56.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
5110950 5110950 PRJDB14274_S_NODE_1005_length_600_cov_1.463822_g930_i0 PRJDB14274 1005 600 1.463822 8.782932 Hyaena hyaena 95912 Chordata Chordata 265 7.009999999999999e-66   NTclustered gi|1965545350|ref|XM_039253320.1| 95912 g930 i0 75.448 21.4166666666667 558 129 92 8 36 589 973 1526 PREDICTED: Hyaena hyaena O-linked N-acetylglucosamine (GlcNAc) transferase (OGT), transcript variant X1, mRNA blastn 12850 265 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Hyaenidae Hyaena Hyaena hyaena
7660847 7660847 PRJDB14274_S_NODE_3107_length_347_cov_1.430070_g3029_i0 PRJDB14274 3107 347 1.43007 4.9623429 Ambystoma mexicanum 8296 Chordata Chordata 252 3.02e-62   NTclustered gi|2851771138|ref|XM_069634943.1| 8296 g3029 i0 82.353 35.0864553314121 289 51 83 0 32 320 1353 1065 PREDICTED: Ambystoma mexicanum PBX homeobox 2 (PBX2), transcript variant X1, mRNA blastn 12175 252 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Ambystomatidae Ambystoma Ambystoma mexicanum
7660869 7660869 PRJDB14274_S_NODE_6907_length_241_cov_1.083333_g6829_i0 PRJDB14274 6907 241 1.083333 2.61083253 Phocoena sinus 42100 Chordata Chordata 143 1.2499999999999998e-29   NTclustered gi|1814623889|ref|XM_032612273.1| 42100 g6829 i0 81.006 28.103734439834 179 34 74 0 60 238 1086 1264 PREDICTED: Phocoena sinus ATPase secretory pathway Ca2+ transporting 2 (ATP2C2), transcript variant X4, mRNA blastn 6773 143 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Phocoenidae Phocoena Phocoena sinus
8935541 8935541 PRJDB14274_S_NODE_6388_length_250_cov_0.915344_g6310_i0 PRJDB14274 6388 250 0.915344 2.28836 Lethenteron reissneri 7753 Chordata Chordata 54.7 0.006   NTclustered gi|2635806785|ref|XM_061547153.1| 7753 g6310 i0 100 0.116 29 0 12 0 194 222 51 79 PREDICTED: Lethenteron reissneri glutamyl-tRNA amidotransferase subunit C (GATC), transcript variant X2, mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lethenteron Lethenteron reissneri
8935554 8935554 PRJDB14274_S_NODE_9468_length_208_cov_0.863946_g9390_i0 PRJDB14274 9468 208 0.863946 1.79700768 Trichosurus vulpecula 9337 Chordata Chordata 58.4 3.92e-4   NTclustered gi|1919038716|ref|XM_036761075.1| 9337 g9390 i0 97.059 5.90384615384615 34 1 16 0 52 85 328 295 PREDICTED: Trichosurus vulpecula secernin 1 (SCRN1), transcript variant X1, mRNA blastn 1228 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Diprotodontia Phalangeridae Trichosurus Trichosurus vulpecula
11486444 11486444 PRJDB14274_S_NODE_1210_length_550_cov_3.051125_g1134_i0 PRJDB14274 1210 550 3.051125 16.7811875 Petromyzon marinus 7757 Chordata Chordata 196 2.36e-45   NTclustered gi|1822363003|ref|XM_032945376.1| 7757 g1134 i0 81.224 19.5309090909091 245 44 44 2 201 444 451 208 PREDICTED: Petromyzon marinus dynein light chain 1, cytoplasmic (LOC116938278), mRNA blastn 10742 196 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Petromyzon Petromyzon marinus
17860416 17860416 PRJDB14274_S_NODE_8855_length_213_cov_1.526316_g8777_i0 PRJDB14274 8855 213 1.526316 3.25105308 Microcaecilia unicolor 1415580 Chordata Chordata 82.4 2.39e-11   NTclustered gi|1717047103|ref|XM_030202301.1| 1415580 g8777 i0 94.34 0.248826291079812 53 3 25 0 121 173 1575 1523 PREDICTED: Microcaecilia unicolor RB binding protein 7, chromatin remodeling factor (RBBP7), mRNA blastn 53 82.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Gymnophiona Siphonopidae Microcaecilia Microcaecilia unicolor
19134089 19134089 PRJDB14274_S_NODE_5356_length_270_cov_1.454545_g5278_i0 PRJDB14274 5356 270 1.454545 3.9272715 Branchiostoma lanceolatum 7740 Chordata Chordata 189 1.8099999999999993e-43   NTclustered gi|2770728434|ref|XM_066445239.1| 7740 g5278 i0 80.567 17.5037037037037 247 46 91 2 25 270 3753 3508 PREDICTED: Branchiostoma lanceolatum splicing factor 3B subunit 1 (LOC136446721), transcript variant X2, mRNA blastn 4726 189 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma lanceolatum
20107491 20107491 PRJDB14274_S_NODE_3176_length_343_cov_1.886525_g3098_i0 PRJDB14274 3176 343 1.886525 6.47078075 Manacus 196036 Chordata Chordata 93.5 1.91e-14   NTclustered gi|1434294701|ref|XM_008929207.3| 328815 g3098 i0 74.138 3.29154518950437 232 56 67 3 3 232 510 739 PREDICTED: Manacus vitellinus platelet activating factor acetylhydrolase 1b regulatory subunit 1 (PAFAH1B1), mRNA blastn 1129 93.5 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Pipridae Manacus Manacus vitellinus
20107498 20107498 PRJDB14274_S_NODE_8956_length_212_cov_1.059603_g8878_i0 PRJDB14274 8956 212 1.059603 2.24635836 root 1 Root_unresolved Root_unresolved 58.4 4.01e-4   NTclustered gi|2791892839|ref|XR_010940731.1| 82174 g8878 i0 100 13.6367924528302 31 0 15 0 151 181 4350 4320 PREDICTED: Pseudorca crassidens uncharacterized lncRNA (LOC137218539), transcript variant X1, ncRNA blastn 2891 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Pseudorca Pseudorca crassidens
20409175 20409175 PRJDB14274_S_NODE_5537_length_266_cov_1.029268_g5459_i0 PRJDB14274 5537 266 1.029268 2.73785288 Trichechus manatus 9778 Chordata Chordata 60.2 1.45e-4   NTclustered gi|471364538|ref|XM_004372759.1| 127582 g5459 i0 86.207 0.21804511278195499 58 5 21 3 84 138 293 350 PREDICTED: Trichechus manatus latirostris engrailed homeobox 2 (EN2), mRNA blastn 58 60.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Sirenia Trichechidae Trichechus Trichechus manatus
24234409 24234409 PRJDB14274_S_NODE_3300_length_337_cov_2.434783_g3222_i0 PRJDB14274 3300 337 2.434783 8.20521871 Pantherophis guttatus 94885 Chordata Chordata 102 3.11e-17   NTclustered gi|2616704543|ref|XM_060689045.1| 94885 g3222 i0 98.276 19.5163204747774 58 1 17 0 280 337 764 821 PREDICTED: Pantherophis guttatus uncharacterized LOC132711049 (LOC132711049), mRNA blastn 6577 102 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Colubridae Pantherophis Pantherophis guttatus
24234415 24234415 PRJDB14274_S_NODE_4580_length_289_cov_3.030702_g4502_i0 PRJDB14274 4580 289 3.030702 8.75872878 Heliangelus exortis 472823 Chordata Chordata 220 6.93e-53   NTclustered gi|2920660417|ref|XM_071732860.1| 472823 g4502 i0 85.99 71.4602076124567 207 27 71 2 81 286 41 246 PREDICTED: Heliangelus exortis histone H3 (LOC139791069), mRNA blastn 20652 220 1 Eukaryota Opisthokonta Metazoa Chordata Aves Apodiformes Trochilidae Heliangelus Heliangelus exortis
24234428 24234428 PRJDB14274_S_NODE_7700_length_229_cov_0.946429_g7622_i0 PRJDB14274 7700 229 0.946429 2.16732241 Spinus spinus 160760 Chordata Chordata 54.7 0.006   NTclustered gi|2917663466|emb|OZ228753.1| 160760 g7622 i0 94.444 0.314410480349345 36 1 15 1 16 50 37205122 37205157 Spinus spinus genome assembly, chromosome: 5 blastn 72 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Fringillidae Spinus Spinus spinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;