RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJDB14274" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJDB14274 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8584 8584 PRJDB14274_S_NODE_7701_length_229_cov_0.922619_g7623_i0 PRJDB14274 7701 229 0.922619 2.11279751 Laccaria bicolor 29883 Fungi Fungi 60.2 1.22e-4   NTclustered gi|170106298|ref|XM_001884326.1| 486041 g7623 i0 97.143 0.152838427947598 35 1 15 0 131 165 625 591 Laccaria bicolor S238N-H82 uncharacterized protein (LACBIDRAFT_303903), partial mRNA blastn 35 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Hydnangiaceae Laccaria Laccaria bicolor
5110980 5110980 PRJDB14274_S_NODE_5725_length_262_cov_1.253731_g5647_i0 PRJDB14274 5725 262 1.253731 3.28477522 Pseudozyma flocculosa 84751 Fungi Fungi 54.7 0.007   NTclustered gi|630966689|ref|XM_007881562.1| 1277687 g5647 i0 100 0.110687022900763 29 0 11 0 93 121 132 104 Pseudozyma flocculosa PF-1 uncharacterized protein (PFL1_04038), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
11486468 11486468 PRJDB14274_S_NODE_6090_length_254_cov_2.062176_g6012_i0 PRJDB14274 6090 254 2.062176 5.23792704 Trichosporon asahii 82508 Fungi Fungi 58.4 4.96e-4   NTclustered gi|930416156|ref|XM_014326876.1| 1186058 g6012 i0 97.143 0.267716535433071 35 0 14 1 203 237 912 945 Trichosporon asahii var. asahii CBS 2479 uncharacterized protein (A1Q1_07892), partial mRNA blastn 68 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Trichosporon Trichosporon asahii
16585374 16585374 PRJDB14274_S_NODE_414_length_928_cov_5.076125_g370_i0 PRJDB14274 414 928 5.076125 47.10644 Tilletiopsis washingtonensis 58919 Fungi Fungi 388 6.289999999999998e-103   NTclustered gi|1423587035|ref|XM_025743209.1| 58919 g370 i0 79.815 18.1713362068966 540 103 58 6 296 832 591 55 Tilletiopsis washingtonensis putative GSP1-GTP-binding protein of the ras superfamily (FA09DRAFT_331860), mRNA blastn 16863 388 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
16585390 16585390 PRJDB14274_S_NODE_8914_length_212_cov_1.841060_g8836_i0 PRJDB14274 8914 212 1.84106 3.9030472 Rhodotorula graminis 29898 Fungi Fungi 204 4.86e-48   NTclustered gi|1069930902|ref|XM_018412876.1| 578459 g8836 i0 87.931 80.5094339622642 174 19 82 2 40 212 1826 1654 Rhodotorula graminis WP1 uncharacterized protein (RHOBADRAFT_29596), mRNA blastn 17068 204 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula graminis
20409190 20409190 PRJDB14274_S_NODE_9657_length_206_cov_1.655172_g9579_i0 PRJDB14274 9657 206 1.655172 3.40965432 Lentinus tigrinus 5365 Fungi Fungi 143 1.04e-29   NTclustered gi|2797387783|ref|XM_067683197.1| 1328758 g9579 i0 81.183 2.88834951456311 186 27 88 8 3 184 2721 2902 Lentinus tigrinus ALCF2SS1-7 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (L226DRAFT_557747), mRNA blastn 595 143 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Lentinus Lentinus tigrinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;