contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJDB14274" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 980940 | 980940 | PRJDB14274_S_NODE_5081_length_277_cov_0.782407_g5003_i0 | PRJDB14274 | 5081 | 277 | 0.782407 | 2.16726739 | Streptococcus | 1301 | Bacteria | Bacteria | 490 | 4.56e-134 | NTclustered | gi|1686100227|gb|MK330575.1| | 28037 | g5003 | i0 | 98.556 | 326.194945848375 | 277 | 4 | 100 | 0 | 1 | 277 | 3729 | 4005 | Streptococcus mitis strain PL429 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 90356 | 490 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 3834724 | 3834724 | PRJDB14274_S_NODE_3744_length_317_cov_2.246094_g3666_i0 | PRJDB14274 | 3744 | 317 | 2.246094 | 7.12011798 | Streptomyces sp. NBC_01003 | 2903714 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|2655201824|gb|CP108707.1| | 2903714 | g3666 | i0 | 100 | 0.0883280757097792 | 28 | 0 | 9 | 0 | 44 | 71 | 5629914 | 5629887 | Streptomyces sp. NBC_01003 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01003 | ||
| 4808883 | 4808883 | PRJDB14274_S_NODE_5244_length_273_cov_1.212264_g5166_i0 | PRJDB14274 | 5244 | 273 | 1.212264 | 3.30948072 | Bacteria | 2 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|54013472|dbj|AP006618.1| | 247156 | g5166 | i0 | 100 | 0.205128205128205 | 28 | 0 | 10 | 0 | 30 | 57 | 2431874 | 2431847 | Nocardia farcinica IFM 10152 DNA, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Nocardia | Nocardia farcinica | ||
| 5110969 | 5110969 | PRJDB14274_S_NODE_2845_length_363_cov_1.794702_g2767_i0 | PRJDB14274 | 2845 | 363 | 1.794702 | 6.51476826 | Humibacter ginsenosidimutans | 2599293 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|1719887840|gb|CP042305.1| | 2599293 | g2767 | i0 | 94.286 | 0.0964187327823691 | 35 | 0 | 9 | 2 | 302 | 335 | 2492700 | 2492667 | Humibacter ginsenosidimutans strain WJ7-1 chromosome, complete genome | blastn | 35 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Humibacter | Humibacter ginsenosidimutans | ||
| 8935524 | 8935524 | PRJDB14274_S_NODE_2728_length_371_cov_1.648387_g2650_i0 | PRJDB14274 | 2728 | 371 | 1.648387 | 6.11551577 | Actinacidiphila reveromycinica | 659352 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|1950600667|dbj|AP018365.1| | 659352 | g2650 | i0 | 100 | 0.0754716981132075 | 28 | 0 | 8 | 0 | 34 | 61 | 7904421 | 7904448 | Streptomyces sp. SN-593 DNA, nearly complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Actinacidiphila | Actinacidiphila reveromycinica | ||
| 8935550 | 8935550 | PRJDB14274_S_NODE_8468_length_218_cov_1.484076_g8390_i0 | PRJDB14274 | 8468 | 218 | 1.484076 | 3.23528568 | Alloscardovia omnicolens | 419015 | Bacteria | Bacteria | 372 | 1.3e-98 | NTclustered | gi|937376393|gb|KR351282.1| | 419015 | g8390 | i0 | 98.122 | 220.967889908257 | 213 | 4 | 98 | 0 | 1 | 213 | 1219 | 1007 | Alloscardovia omnicolens strain CCUG 31649T 23S ribosomal RNA gene, partial sequence | blastn | 48171 | 372 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Alloscardovia | Alloscardovia omnicolens | ||
| 12762084 | 12762084 | PRJDB14274_S_NODE_4371_length_296_cov_1.068085_g4293_i0 | PRJDB14274 | 4371 | 296 | 1.068085 | 3.1615316 | Miniimonas sp. S16 | 2171623 | Bacteria | Bacteria | 54.7 | 0.008 | NTclustered | gi|1384397111|gb|CP029049.1| | 2171623 | g4293 | i0 | 100 | 0.097972972972973 | 29 | 0 | 10 | 0 | 260 | 288 | 2318597 | 2318569 | Miniimonas sp. S16 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Beutenbergiaceae | Miniimonas | Miniimonas sp. S16 | ||
| 17860374 | 17860374 | PRJDB14274_S_NODE_1515_length_496_cov_1.328736_g1438_i0 | PRJDB14274 | 1515 | 496 | 1.328736 | 6.59053056 | Actinomyces faecalis | 2722820 | Bacteria | Bacteria | 52.8 | 0.048 | NTclustered | gi|1928816069|gb|CP063418.1| | 2722820 | g1438 | i0 | 100 | 0.0564516129032258 | 28 | 0 | 6 | 0 | 229 | 256 | 1693417 | 1693444 | Actinomyces faecalis strain ZJ34 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces faecalis | ||
| 20107493 | 20107493 | PRJDB14274_S_NODE_6916_length_241_cov_0.772222_g6838_i0 | PRJDB14274 | 6916 | 241 | 0.772222 | 1.86105502 | Corynebacterium | 1716 | Bacteria | Bacteria | 409 | 1.12e-109 | NTclustered | gi|1980274752|gb|CP068291.1| | 38290 | g6838 | i0 | 98.701 | 347.879668049793 | 231 | 1 | 95 | 2 | 4 | 232 | 1317055 | 1316825 | Corynebacterium macginleyi strain 180208 chromosome, complete genome | blastn | 83839 | 412 | 0.992718446601942 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium macginleyi | ||
| 20409173 | 20409173 | PRJDB14274_S_NODE_5357_length_270_cov_1.430622_g5279_i0 | PRJDB14274 | 5357 | 270 | 1.430622 | 3.8626794 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2893356050|emb|OZ220473.1| | 2026734 | g5279 | i0 | 100 | 0.107407407407407 | 29 | 0 | 11 | 0 | 125 | 153 | 562982 | 562954 | MAG: Dehalococcoidia bacterium isolate 87cb072c-069b-458f-9ccb-7e689b7dc65c genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 20409174 | 20409174 | PRJDB14274_S_NODE_5397_length_269_cov_1.495192_g5319_i0 | PRJDB14274 | 5397 | 269 | 1.495192 | 4.02206648 | Staphylococcus chromogenes | 46126 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1714031411|gb|CP031274.1| | 46126 | g5319 | i0 | 100 | 0.20817843866171 | 28 | 0 | 10 | 0 | 95 | 122 | 1684686 | 1684713 | Staphylococcus chromogenes strain 17A chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus chromogenes | ||
| 21685148 | 21685148 | PRJDB14274_S_NODE_7478_length_232_cov_0.988304_g7400_i0 | PRJDB14274 | 7478 | 232 | 0.988304 | 2.29286528 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 374 | 3.9e-99 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g7400 | i0 | 95.726 | 567.198275862069 | 234 | 6 | 100 | 4 | 1 | 232 | 3375 | 3606 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 131590 | 374 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 21685156 | 21685156 | PRJDB14274_S_NODE_9978_length_204_cov_0.930070_g9900_i0 | PRJDB14274 | 9978 | 204 | 0.93007 | 1.8973428 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 377 | 2.59e-100 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g9900 | i0 | 100 | 463.132352941176 | 204 | 0 | 100 | 0 | 1 | 204 | 2353 | 2150 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 94479 | 377 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 23933400 | 23933400 | PRJDB14274_S_NODE_10239_length_202_cov_1.007092_g10161_i0 | PRJDB14274 | 10239 | 202 | 1.007092 | 2.03432584 | Streptococcus | 1301 | Bacteria | Bacteria | 363 | 7.149999999999999e-96 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g10161 | i0 | 99.01 | 345.094059405941 | 202 | 2 | 100 | 0 | 1 | 202 | 1571258 | 1571459 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 69709 | 363 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;