contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJDB12578" and tax_clade = "core chlorophytes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1275995 | 1275995 | PRJDB12578_S_NODE_137542_length_217_cov_0.922619_g114484_i0 | PRJDB12578 | 137542 | 217 | 0.922619 | 2.00208323 | Chlamydomonas agloeformis | 160058 | Plants | Plants | 374 | 3.6e-99 | NTclustered | gi|17028271|gb|L43351.1|CRECPRRNLB | 160058 | g114484 | i0 | 97.696 | 144.608294930876 | 217 | 5 | 100 | 0 | 1 | 217 | 2124 | 2340 | Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene | blastn | 31380 | 374 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas agloeformis | |
| 2553346 | 2553346 | PRJDB12578_S_NODE_182683_length_176_cov_1.220472_g159625_i0 | PRJDB12578 | 182683 | 176 | 1.220472 | 2.14803072 | Pediastrum duplex | 3105 | Plants | Plants | 215 | 1.79e-51 | NTclustered | gi|21040380|gb|AF183479.2| | 3105 | g159625 | i0 | 88.889 | 24.3238636363636 | 180 | 13 | 100 | 7 | 1 | 176 | 3036 | 3212 | Pediastrum duplex strain UTEX LB 1364 28S ribosomal RNA gene, partial sequence | blastn | 4281 | 215 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Hydrodictyaceae | Pediastrum | Pediastrum duplex | |
| 6378721 | 6378721 | PRJDB12578_S_NODE_103986_length_279_cov_2.152174_g80928_i0 | PRJDB12578 | 103986 | 279 | 2.152174 | 6.00456546 | Volvox carteri | 3067 | Plants | Plants | 56.5 | 0.002 | NTclustered | gi|302841848|ref|XM_002952423.1| | 3068 | g80928 | i0 | 94.595 | 0.236559139784946 | 37 | 1 | 13 | 1 | 243 | 278 | 412 | 448 | Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_93102), partial mRNA | blastn | 66 | 56.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Volvocaceae | Volvox | Volvox carteri | |
| 7358405 | 7358405 | PRJDB12578_S_NODE_134686_length_220_cov_1.824561_g111628_i0 | PRJDB12578 | 134686 | 220 | 1.824561 | 4.0140342 | Neochloris | 3098 | Plants | Plants | 368 | 1.6999999999999997e-97 | NTclustered | gi|9438169|gb|AF277653.1| | 3099 | g111628 | i0 | 96.818 | 98.2363636363636 | 220 | 7 | 100 | 0 | 1 | 220 | 2027 | 1808 | Neochloris aquatica strain UTEX 138 28S ribosomal RNA gene, partial sequence | blastn | 21612 | 368 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Neochloridaceae | Neochloris | Neochloris aquatica | |
| 7655899 | 7655899 | PRJDB12578_S_NODE_187387_length_173_cov_1.080645_g164329_i0 | PRJDB12578 | 187387 | 173 | 1.080645 | 1.86951585 | Crucigenia quadrata | 2782530 | Plants | Plants | 52.8 | 0.015 | NTclustered | gi|2875298507|gb|PQ301446.1| | 2782530 | g164329 | i0 | 100 | 0.161849710982659 | 28 | 0 | 16 | 0 | 53 | 80 | 152550 | 152523 | Crucigenia quadrata strain FACHB-1904 chloroplast, complete genome | blastn | 28 | 52.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Crucigenia | Crucigenia quadrata | |
| 11478493 | 11478493 | PRJDB12578_S_NODE_106090_length_273_cov_3.522321_g83032_i0 | PRJDB12578 | 106090 | 273 | 3.522321 | 9.61593633 | Picochlorum sp. | 2812594 | Plants | Plants | 154 | 6.68e-33 | NTclustered | gi|2632235332|gb|OR922714.1| | 2812594 | g83032 | i0 | 92.593 | 34.1904761904762 | 108 | 7 | 39 | 1 | 1 | 107 | 3716 | 3823 | Picochlorum sp. strain AGSB0128 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 9334 | 154 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Picochlorum | Picochlorum sp. | |||
| 11479125 | 11479125 | PRJDB12578_S_NODE_121550_length_240_cov_2.408377_g98492_i0 | PRJDB12578 | 121550 | 240 | 2.408377 | 5.7801048 | Chlamydomonas chlamydogama | 225041 | Plants | Plants | 54.7 | 0.006 | NTclustered | gi|2386956196|ref|NC_068623.1| | 225041 | g98492 | i0 | 92.308 | 1.42916666666667 | 39 | 1 | 15 | 1 | 175 | 211 | 46142 | 46104 | Chlamydomonas chlamydogama strain 11-48b chloroplast, complete genome | blastn | 343 | 54.7 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas chlamydogama | |
| 12761945 | 12761945 | PRJDB12578_S_NODE_97011_length_302_cov_1.636364_g73953_i0 | PRJDB12578 | 97011 | 302 | 1.636364 | 4.94181928 | Tetradesmus lancea | 3073545 | Plants | Plants | 52.8 | 0.028 | NTclustered | gi|2661059500|gb|OR502671.1| | 3073545 | g73953 | i0 | 94.286 | 0.115894039735099 | 35 | 0 | 11 | 2 | 23 | 55 | 151730 | 151764 | Tetradesmus lancea strain FBCC-A0708 chloroplast, complete genome | blastn | 35 | 52.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Scenedesmaceae | Tetradesmus | Tetradesmus lancea | |
| 13734299 | 13734299 | PRJDB12578_S_NODE_196971_length_168_cov_0.764706_g173913_i0 | PRJDB12578 | 196971 | 168 | 0.764706 | 1.28470608 | Sphaeropleales | 35491 | Plants | Plants | 259 | 7.75e-65 | NTclustered | gi|6120006|gb|AF183466.1| | 3092 | g173913 | i0 | 94.675 | 100.517857142857 | 169 | 6 | 100 | 2 | 1 | 168 | 1053 | 887 | Characiopodium hindakii strain UTEX 2098 28S ribosomal RNA gene, partial sequence | blastn | 16887 | 261 | 0.992337164750958 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Neochloridaceae | Characiopodium | Characiopodium hindakii | |
| 17852716 | 17852716 | PRJDB12578_S_NODE_113555_length_256_cov_1.256039_g90497_i0 | PRJDB12578 | 113555 | 256 | 1.256039 | 3.21545984 | Neochloris aquatica | 3099 | Plants | Plants | 407 | 4.31e-109 | NTclustered | gi|1008861455|ref|NC_029670.1| | 3099 | g90497 | i0 | 95.331 | 157.1328125 | 257 | 10 | 100 | 2 | 1 | 256 | 80394 | 80139 | Neochloris aquatica strain UTEX 138 chloroplast, complete genome | blastn | 40226 | 407 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Neochloridaceae | Neochloris | Neochloris aquatica | |
| 21677252 | 21677252 | PRJDB12578_S_NODE_109498_length_265_cov_1.175926_g86440_i0 | PRJDB12578 | 109498 | 265 | 1.175926 | 3.1162039 | Chlorococcum sp. KSF0227 | 2978530 | Plants | Plants | 63.9 | 1.12e-5 | NTclustered | gi|2441075444|gb|OP448669.1| | 2978530 | g86440 | i0 | 97.297 | 0.675471698113208 | 37 | 1 | 14 | 0 | 32 | 68 | 69831 | 69867 | Chlorococcum sp. KSF0227 chloroplast, complete genome | blastn | 179 | 63.9 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlorococcaceae | Chlorococcum | Chlorococcum sp. KSF0227 | |
| 24229476 | 24229476 | PRJDB12578_S_NODE_188040_length_172_cov_1.674797_g164982_i0 | PRJDB12578 | 188040 | 172 | 1.674797 | 2.88065084 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 56.5 | 0.001 | NTclustered | gi|294846000|gb|GU814015.1| | 3055 | g164982 | i0 | 100 | 0.174418604651163 | 30 | 0 | 17 | 0 | 1 | 30 | 293495 | 293466 | Chlamydomonas reinhardtii strain CC-2290 NIC7m (NIC7m), SPS1m (SPS1m), SPP1Cm (SPP1Cm), EIF5Bbm (EIF5Bbm), PTC1m (PTC1m), 182394m (182394m), 97782m (97782m), RFC4m (RFC4m), 182392m (182392m), ALB3m (ALB3m), PSF2m (PSF2m), 182390m (182390m), 182389m (182389m), 294687m (294687m), HDH1m (HDH1m), TOC34m (TOC34m), 522875m (522875m), LPS1m (LPS1m), PDK1m (PDK1m), CGL70m (CGL70m), NMDA1m (NMDA1m), DRG1m (DRG1m), OTU2m (OTU2m), 155027m (155027m), MTP0618m (MTP0618m), PR46bm (PR46bm), PR46am (PR46am), GCSHm (GCSHm), UBCH1m (UBCH1m), MADS2m (MADS2m), PKY1m (PKY1m), MIDm (MIDm), DLA3m (DLA3m), 522872m (522872m), MTD1m (MTD1m), LEU1Sm (LEU1Sm), SPL2m (SPL2m), HGRP1m (HGRP1m), UTP1m (UTP1m), MTP0796m (MTP0796m), and MT0828m (MT0828m) genes, complete cds | blastn | 30 | 56.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;