RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJDB12578" and tax_clade = "ant, tsetse, mealybug, aphid, etc. endosymbionts"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • ant, tsetse, mealybug, aphid, etc. endosymbionts · 2 ✖

bioproject 1

  • PRJDB12578 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1282041 1282041 PRJDB12578_S_NODE_83862_length_366_cov_1.470032_g60804_i0 PRJDB12578 83862 366 1.470032 5.38031712 Candidatus Williamhamiltonella endosymbiont of Tuberolachnus salignus 3077954 Bacteria Bacteria 217 1.16e-51   NTclustered gi|2706542414|emb|OZ026471.1| 3077954 g60804 i0 81.181 18.1366120218579 271 49 74 2 95 364 546610 546341 Candidatus Hamiltonella endosymbiont of Tuberolachnus salignus isolate eee46e84-88ba-4997-9627-ba9a3c08c7b3 genome assembly, chromosome: 1 blastn 6638 217 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Williamhamiltonella Candidatus Williamhamiltonella endosymbiont of Tuberolachnus salignus
12754012 12754012 PRJDB12578_S_NODE_105531_length_275_cov_1.730088_g82473_i0 PRJDB12578 105531 275 1.730088 4.757742 Candidatus Stammera capleta 2608262 Bacteria Bacteria 54.7 0.007   NTclustered gi|2676815370|gb|CP144843.1| 2608262 g82473 i0 96.875 0.116363636363636 32 1 12 0 231 262 35947 35916 MAG: Candidatus Stammera capleta isolate BAJEDFMN chromosome blastn 32 54.7 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;