contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJDB12134" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59 | 59 | PRJDB12134_P_NODE_14401_length_242_cov_0.905325_g14266_i0 | PRJDB12134 | 14401 | 242 | 0.905325 | 2.1908865 | Chryseobacterium aureum | 2497456 | Bacteria | Bacteria | 322 | 1.5e-83 | NTclustered | gi|1543017349|gb|CP034661.1| | 2497456 | g14266 | i0 | 91.139 | 16.702479338843 | 237 | 21 | 98 | 0 | 6 | 242 | 4090501 | 4090265 | Chryseobacterium aureum strain 17S1E7 chromosome | blastn | 4042 | 322 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium aureum | |
| 182 | 182 | PRJDB12134_P_NODE_8901_length_315_cov_0.797521_g8766_i0 | PRJDB12134 | 8901 | 315 | 0.797521 | 2.51219115 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 555 | 1.8399999999999994e-153 | NTclustered | gi|1527187866|gb|CP034161.1| | 2487072 | g8766 | i0 | 98.418 | 461.12380952381 | 316 | 3 | 100 | 2 | 1 | 315 | 806320 | 806634 | Epilithonimonas vandammei strain F5649 chromosome, complete genome | blastn | 145254 | 555 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 980645 | 980645 | PRJDB12134_P_NODE_9541_length_297_cov_1.834821_g9406_i0 | PRJDB12134 | 9541 | 297 | 1.834821 | 5.44941837 | Prevotella | 838 | Bacteria | Bacteria | 532 | 8.08e-147 | NTclustered | gi|2028856500|gb|CP072350.1| | 28132 | g9406 | i0 | 98.99 | 234.639730639731 | 297 | 3 | 100 | 0 | 1 | 297 | 698082 | 697786 | Prevotella melaninogenica strain F0301 chromosome 2, complete sequence | blastn | 69688 | 532 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella melaninogenica | |
| 4808574 | 4808574 | PRJDB12134_P_NODE_9624_length_295_cov_1.842342_g9489_i0 | PRJDB12134 | 9624 | 295 | 1.842342 | 5.4349089 | Pedobacter | 84567 | Bacteria | Bacteria | 544 | 3.71e-150 | NTclustered | gi|470484653|ref|NR_076660.1| | 984 | g9489 | i0 | 100 | 331.193220338983 | 294 | 0 | 99 | 0 | 1 | 294 | 540 | 833 | Pedobacter heparinus strain DSM 2366 23S ribosomal RNA gene, complete sequence | blastn | 97702 | 544 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter heparinus | |
| 9908817 | 9908817 | PRJDB12134_P_NODE_9208_length_305_cov_1.383621_g9073_i0 | PRJDB12134 | 9208 | 305 | 1.383621 | 4.22004405 | Haliscomenobacter | 2349 | Bacteria | Bacteria | 250 | 9.39e-62 | NTclustered | gi|470488547|ref|NR_076877.1| | 2350 | g9073 | i0 | 89.95 | 266.291803278689 | 199 | 12 | 65 | 3 | 1 | 199 | 1648 | 1458 | Haliscomenobacter hydrossis strain DSM 1100 23S ribosomal RNA gene, complete sequence | blastn | 81219 | 250 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Saprospiria | Saprospirales | Haliscomenobacteraceae | Haliscomenobacter | Haliscomenobacter hydrossis | |
| 10202994 | 10202994 | PRJDB12134_P_NODE_4889_length_484_cov_1.423358_g4755_i0 | PRJDB12134 | 4889 | 484 | 1.423358 | 6.88905272 | Dyadobacter chenwenxiniae | 2906456 | Bacteria | Bacteria | 861 | 0 | NTclustered | gi|2221365986|gb|CP094997.1| | 2906456 | g4755 | i0 | 98.76 | 404.092975206612 | 484 | 6 | 100 | 0 | 1 | 484 | 5504660 | 5504177 | Dyadobacter chenwenxiniae strain LJ419 chromosome, complete genome | blastn | 195581 | 861 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Dyadobacter | Dyadobacter chenwenxiniae | |
| 10203069 | 10203069 | PRJDB12134_P_NODE_9709_length_293_cov_2.809091_g9574_i0 | PRJDB12134 | 9709 | 293 | 2.809091 | 8.23063663 | Prevotella sp. oral taxon 475 | 712471 | Bacteria | Bacteria | 252 | 2.4999999999999997e-62 | NTclustered | gi|2028838898|gb|CP072334.1| | 712471 | g9574 | i0 | 97.297 | 1.96245733788396 | 148 | 4 | 100 | 0 | 146 | 293 | 411430 | 411283 | Prevotella sp. oral taxon 475 strain F0059 chromosome, complete genome | blastn | 575 | 252 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella sp. oral taxon 475 | |
| 11478024 | 11478024 | PRJDB12134_P_NODE_14070_length_243_cov_1.817647_g13935_i0 | PRJDB12134 | 14070 | 243 | 1.817647 | 4.41688221 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|1527200821|gb|CP034160.1| | 2487072 | g13935 | i0 | 99.588 | 22.8312757201646 | 243 | 1 | 100 | 0 | 1 | 243 | 437308 | 437066 | Epilithonimonas vandammei strain H6466 chromosome, complete genome | blastn | 5548 | 444 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 12459783 | 12459783 | PRJDB12134_P_NODE_12250_length_253_cov_1.788889_g12115_i0 | PRJDB12134 | 12250 | 253 | 1.788889 | 4.52588917 | Adhaeribacter | 299566 | Bacteria | Bacteria | 407 | 4.2500000000000005e-109 | NTclustered | gi|1891112286|gb|CP055156.1| | 2086471 | g12115 | i0 | 95.669 | 271.130434782609 | 254 | 9 | 100 | 2 | 1 | 253 | 94822 | 94570 | Adhaeribacter swui strain KCTC 52873 chromosome, complete genome | blastn | 68596 | 407 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Adhaeribacter | Adhaeribacter swui | |
| 14028080 | 14028080 | PRJDB12134_P_NODE_13772_length_245_cov_0.906977_g13637_i0 | PRJDB12134 | 13772 | 245 | 0.906977 | 2.22209365 | Capnocytophaga leadbetteri | 327575 | Bacteria | Bacteria | 436 | 5.229999999999999e-118 | NTclustered | gi|1242560045|gb|CP022384.1| | 327575 | g13637 | i0 | 98.776 | 4.86122448979592 | 245 | 3 | 100 | 0 | 1 | 245 | 1431077 | 1431321 | Capnocytophaga leadbetteri strain H6253 chromosome, complete genome | blastn | 1191 | 436 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Capnocytophaga | Capnocytophaga leadbetteri | |
| 15302239 | 15302239 | PRJDB12134_P_NODE_5133_length_470_cov_1.949622_g4999_i0 | PRJDB12134 | 5133 | 470 | 1.949622 | 9.1632234 | Pedobacter sp. FW305-3-2-15-E-R2A2 | 3140251 | Bacteria | Bacteria | 785 | 0 | NTclustered | gi|2720698973|gb|CP151803.1| | 3140251 | g4999 | i0 | 96.809 | 354.778723404255 | 470 | 15 | 100 | 0 | 1 | 470 | 6988372 | 6988841 | Pedobacter sp. FW305-3-2-15-E-R2A2 chromosome, complete genome | blastn | 166746 | 785 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter sp. FW305-3-2-15-E-R2A2 | |
| 16283357 | 16283357 | PRJDB12134_P_NODE_11973_length_258_cov_1.675676_g11838_i0 | PRJDB12134 | 11973 | 258 | 1.675676 | 4.32324408 | Pedobacter | 84567 | Bacteria | Bacteria | 466 | 7.08e-127 | NTclustered | gi|470484653|ref|NR_076660.1| | 984 | g11838 | i0 | 99.225 | 345.728682170543 | 258 | 2 | 100 | 0 | 1 | 258 | 2788 | 2531 | Pedobacter heparinus strain DSM 2366 23S ribosomal RNA gene, complete sequence | blastn | 89198 | 466 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter heparinus | |
| 16283359 | 16283359 | PRJDB12134_P_NODE_12953_length_249_cov_1.460227_g12818_i0 | PRJDB12134 | 12953 | 249 | 1.460227 | 3.63596523 | Capnocytophaga | 1016 | Bacteria | Bacteria | 375 | 1.18e-99 | NTclustered | gi|1242560045|gb|CP022384.1| | 327575 | g12818 | i0 | 99.517 | 271.028112449799 | 207 | 0 | 83 | 1 | 44 | 249 | 371179 | 370973 | Capnocytophaga leadbetteri strain H6253 chromosome, complete genome | blastn | 67486 | 375 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Capnocytophaga | Capnocytophaga leadbetteri | |
| 17851930 | 17851930 | PRJDB12134_P_NODE_13075_length_249_cov_0.880682_g12940_i0 | PRJDB12134 | 13075 | 249 | 0.880682 | 2.19289818 | Sphingobacterium thalpophilum | 259 | Bacteria | Bacteria | 327 | 3.34e-85 | NTclustered | gi|2647208394|gb|CP141191.1| | 259 | g12940 | i0 | 91.915 | 374.626506024096 | 235 | 17 | 94 | 2 | 15 | 249 | 751793 | 751561 | Sphingobacterium thalpophilum strain YX-3 chromosome, complete genome | blastn | 93282 | 327 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium thalpophilum | |
| 24225856 | 24225856 | PRJDB12134_P_NODE_11300_length_269_cov_1.500000_g11165_i0 | PRJDB12134 | 11300 | 269 | 1.5 | 4.035 | Sphingobacterium sp. UDSM-2020 | 2795738 | Bacteria | Bacteria | 464 | 2.67e-126 | NTclustered | gi|1948801041|gb|CP066166.1| | 2795738 | g11165 | i0 | 97.77 | 2.23791821561338 | 269 | 6 | 100 | 0 | 1 | 269 | 782410 | 782142 | Sphingobacterium sp. UDSM-2020 chromosome | blastn | 602 | 464 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium sp. UDSM-2020 | |
| 25206763 | 25206763 | PRJDB12134_P_NODE_9120_length_308_cov_1.263830_g8985_i0 | PRJDB12134 | 9120 | 308 | 1.26383 | 3.8925964 | Niabella | 379899 | Bacteria | Bacteria | 412 | 1.1399999999999997e-110 | NTclustered | gi|2070850032|gb|CP079214.1| | 2849502 | g8985 | i0 | 90.939 | 144.636363636364 | 309 | 24 | 100 | 4 | 1 | 308 | 1677630 | 1677935 | Niabella sp. I6 chromosome | blastn | 44548 | 412 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Niabella | Niabella sp. I6 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;