{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA982106\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[16266897, "PRJNA982106_P_NODE_30753_length_242_cov_0.911243_g30513_i0", "PRJNA982106", "30753", "242", "0.911243", "2.20520806", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "213", "9.45e-51", "", "NTclustered", "gi|2874253755|emb|OY969695.1|", "412054", "g30513", "i0", "83.475", "6.7603305785124", "236", "31", "97", "5", "8", "242", "238195", "237967", "MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1", "blastn", "1636", "213", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [19122477, "PRJNA982106_P_NODE_30735_length_242_cov_0.911243_g30495_i0", "PRJNA982106", "30735", "242", 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[Gemmatimonadaceae bacterium]", "diamond", "4131", "90.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [30342799, "PRJNA982106_P_NODE_22712_length_249_cov_0.875000_g22472_i0", "PRJNA982106", "22712", "249", "0.875", "2.17875", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "90.1", "2.55e-20", "", "NR", "HZE09488.1", "2026741", "g22472", "i0", "58.8", "0.819277108433735", "68", "28", "81.9", "0", "2", "205", "124", "191", "HZE09488.1 S24 family peptidase [Gemmatimonadaceae bacterium]", "diamond", "204", "90.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [30626464, "PRJNA982106_P_NODE_23653_length_249_cov_0.875000_g23413_i0", "PRJNA982106", "23653", "249", "0.875", "2.17875", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "118", "1.87e-30", "", "NR", "MEO7084700.1", "2026741", "g23413", "i0", "74.4", "3.93975903614458", "82", "21", "98.8", "0", "248", "3", "60", "141", "MEO7084700.1 tRNA pseudouridine(55) synthase TruB [Gemmatimonadaceae bacterium]", "diamond", "981", "118", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [30689725, "PRJNA982106_P_NODE_24653_length_248_cov_0.880000_g24413_i0", "PRJNA982106", "24653", "248", "0.88", "2.1824", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "117", "1.18e-30", "", "NR", "HZA94415.1", "2448054", "g24413", "i0", "83.8", "0.82258064516129", "68", "11", "82.3", "0", "1", "204", "14", "81", "HZA94415.1 hypothetical protein [Gemmatimonadales bacterium]", "diamond", "204", "117", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales 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"HEV8455187.1 amidohydrolase family protein [Gemmatimonadales bacterium]", "diamond", "177", "126", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [32213729, "PRJNA982106_P_NODE_32598_length_241_cov_0.916667_g32358_i0", "PRJNA982106", "32598", "241", "0.916667", "2.20916747", "FCB group", "1783270", "Bacteria", "Bacteria", "106", "3.36e-25", "", "NR", "HTJ21870.1", "2026741", "g32358", "i0", "94.5", "6.84647302904564", "55", "3", "68.5", "0", "165", "1", "1", "55", "HTJ21870.1 DNA repair exonuclease [Gemmatimonadaceae bacterium]", "diamond", "1650", "106", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA982106", "p1": "Pseudomonadati", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA982106", "label": "PRJNA982106", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA982106&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 237.10915999981808}