{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA929522\" and tax_phylum = \"Nematoda\"", "rows": [[905366, "PRJNA929522_S_NODE_6021_length_289_cov_0.847222_g5951_i0", "PRJNA929522", "6021", "289", "0.847222", "2.44847158", "Caenorhabditis elegans", "6239", "Nematoda", "Nematoda", "534", "2.18e-147", "", "NTclustered", "gi|1972225930|ref|NM_058275.7|", "6239", "g5951", "i0", "100", "8.02076124567474", "289", "0", "100", "0", "1", "289", "651", "363", "Caenorhabditis elegans Large ribosomal subunit protein uL30 (rpl-7), mRNA", "blastn", "2318", "534", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis elegans"], [4733772, "PRJNA929522_S_NODE_2364_length_433_cov_8.280556_g2294_i0", "PRJNA929522", "2364", "433", "8.280556", "35.85480748", "Rhabditida", "6236", "Nematoda", "Nematoda", "174", "1.0699999999999996e-52", "", "NR", "ULU10924.1", "6238", "g2294", "i0", "82.6", "43.8360277136259", "109", "19", "75.5", "0", "330", "4", "47", "155", "ULU10924.1 hypothetical protein L3Y34_014857 [Caenorhabditis briggsae]", "diamond", "18981", "175", "0.994285714285714", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"], [6008589, "PRJNA929522_S_NODE_2865_length_394_cov_2.246106_g2795_i0", "PRJNA929522", "2865", "394", "2.246106", "8.84965764", "Rhabditida", "6236", "Nematoda", "Nematoda", "143", "4.72e-38", "", "NR", "QQD79810.1", "34510", "g2795", "i0", "55.6", "10.7131979695431", "133", "46", "91.4", "4", "363", "4", "16", "148", "QQD79810.1 calreticulin [Heterodera avenae]", "diamond", "4221", "144", "0.993055555555556", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Heteroderidae", "Heterodera", "Heterodera avenae"], [7283393, "PRJNA929522_S_NODE_1446_length_546_cov_2.928118_g1376_i0", "PRJNA929522", "1446", "546", "2.928118", "15.98752428", "Caenorhabditis briggsae", "6238", "Nematoda", "Nematoda", "165", "6.61e-36", "", "NTclustered", "gi|268553420|ref|XM_002634650.1|", "6238", "g1376", "i0", "80.365", "1.1978021978022", "219", "42", "40", "1", "61", "279", "13", "230", "Caenorhabditis briggsae Protein CBR-DLC-1 (Cbr-dlc-1), partial mRNA", "blastn", "654", "165", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"], [7283440, "PRJNA929522_S_NODE_6206_length_285_cov_1.089623_g6136_i0", "PRJNA929522", "6206", "285", "1.089623", "3.10542555", "Pristionchus sp. 15 RS5229", "452809", "Nematoda", "Nematoda", "254", "6.72e-63", "", "NTclustered", "gi|150982261|gb|EF634719.1|", "452809", "g6136", "i0", "83.333", "20.719298245614", "276", "42", "96", "4", "11", "284", "303", "30", "Pristionchus sp. 15 RS5229 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds", "blastn", "5905", "254", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus sp. 15 RS5229"], [7283451, "PRJNA929522_S_NODE_7586_length_263_cov_1.063158_g7516_i0", "PRJNA929522", "7586", "263", "1.063158", "2.79610554", "Caenorhabditis elegans", "6239", "Nematoda", "Nematoda", "52.8", "0.024", "", "NTclustered", "gi|1752837|emb|Z81031.1|", "6239", "g7516", "i0", "100", "0.212927756653992", "28", "0", "11", "0", "61", "88", "12634", "12607", "Caenorhabditis elegans Cosmid C02D4, complete sequence", "blastn", "56", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis elegans"], [7631561, "PRJNA929522_S_NODE_626_length_791_cov_2.204735_g572_i0", "PRJNA929522", "626", "791", "2.204735", "17.43945385", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "62.8", "3.99e-7", "", "NR", "XP_024503545.1", "34506", "g572", "i0", "32.4", "3.63716814159292", "136", "76", "48.2", "6", "104", "484", "53", "181", "XP_024503545.1 BTB/POZ-like domain and Coagulation factor 5/8 C-terminal type domain and Galactose-binding domain-like and BTB/POZ fold domain and BTB/Kelch-associated domain and BTB/POZ domain-containing protein [Strongyloides ratti]", "diamond", "2877", "63.2", "0.993670886075949", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"], [18756877, "PRJNA929522_S_NODE_3775_length_347_cov_2.656934_g3705_i0", "PRJNA929522", "3775", "347", "2.656934", "9.21956098", "Oigolaimella attenuata", "669116", "Nematoda", "Nematoda", "252", "3.02e-62", "", "NTclustered", "gi|256709322|gb|GQ422336.1|", "669116", "g3705", "i0", "83.835", "31.0720461095101", "266", "41", "76", "2", "1", "265", "306", "42", "Oigolaimella attenuata large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds", "blastn", "10782", "252", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Diplogasteridae", "Oigolaimella", "Oigolaimella attenuata"], [21307392, "PRJNA929522_S_NODE_1137_length_604_cov_3.625235_g1071_i0", "PRJNA929522", "1137", "604", "3.625235", "21.8964194", "Pristionchus americanus", "376549", "Nematoda", "Nematoda", "224", "1.1999999999999998e-53", "", "NTclustered", "gi|150982255|gb|EF634716.1|", "376549", "g1071", "i0", "81.522", "35.8476821192053", "276", "47", "45", "4", "62", "335", "30", "303", "Pristionchus americanus large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds", "blastn", "21652", "224", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Neodiplogasteridae", "Pristionchus", "Pristionchus americanus"], [27498975, "PRJNA929522_S_NODE_8063_length_256_cov_1.262295_g7993_i0", "PRJNA929522", "8063", "256", "1.262295", "3.2314752", "Mesorhabditis belari", "2138241", "Nematoda", "Nematoda", "79.7", "4.3e-15", "", "NR", "CAJ0920049.1", "2138241", "g7993", "i0", "74.5", "1.2890625", "55", "14", "64.5", "0", "256", "92", "685", "739", "CAJ0920049.1 unnamed protein product, partial [Mesorhabditis belari]", "diamond", "330", "79.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Mesorhabditis", "Mesorhabditis belari"], [27783204, "PRJNA929522_S_NODE_2784_length_400_cov_1.874618_g2714_i0", "PRJNA929522", "2784", "400", "1.874618", "7.498472", "Strongyloides ratti", "34506", "Nematoda", "Nematoda", "82", "2.15e-15", "", "NR", "XP_024508241.1", "34506", "g2714", "i0", "41.8", "0.915", "122", "63", "87", "3", "44", "391", "1", "120", "XP_024508241.1 Guanine nucleotide-binding protein G(k) subunit alpha [Strongyloides ratti]", "diamond", "366", "82", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"], [27909047, "PRJNA929522_S_NODE_6325_length_283_cov_1.095238_g6255_i0", "PRJNA929522", "6325", "283", "1.095238", "3.09952354", "Acanthocheilonema viteae", "6277", "Nematoda", "Nematoda", "53.5", "9.87e-6", "", "NR", "KAL3989462.1", "6277", "g6255", "i0", "50.9", "1.12367491166078", "53", "26", "56.2", "0", "159", "1", "184", "236", "KAL3989462.1 Kinesin motor domain family protein [Acanthocheilonema viteae]", "diamond", "318", "53.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Onchocercidae", "Acanthocheilonema", "Acanthocheilonema viteae"], [28004298, "PRJNA929522_S_NODE_9385_length_245_cov_1.343023_g9315_i0", "PRJNA929522", "9385", "245", "1.343023", "3.29040635", "Gongylonema pulchrum", "637853", "Nematoda", "Nematoda", "58.2", "8.98e-9", "", "NR", "VDK47145.1", "637853", "g9315", "i0", "50", "1.84897959183673", "50", "25", "61.2", "0", "244", "95", "18", "67", "VDK47145.1 unnamed protein product [Gongylonema pulchrum]", "diamond", "453", "58.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Gongylonematidae", "Gongylonema", "Gongylonema pulchrum"], [28674254, "PRJNA929522_S_NODE_7867_length_259_cov_1.236559_g7797_i0", "PRJNA929522", "7867", "259", "1.236559", "3.20268781", "Onchocercidae", "6296", "Nematoda", "Nematoda", "67.4", "5.45e-11", "", "NR", "XP_042936552.1", "6279", "g7797", "i0", "46.8", "3.68339768339768", "79", "37", "90.3", "4", "2", "235", "5", "79", "XP_042936552.1 Uncharacterized protein BM_BM1860 [Brugia malayi]", "diamond", "954", "67.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Onchocercidae", "Brugia", "Brugia malayi"], [30505996, "PRJNA929522_S_NODE_8133_length_255_cov_1.269231_g8063_i0", "PRJNA929522", "8133", "255", "1.269231", "3.23653905", "Metazoa", "33208", "Nematoda", "Nematoda", "119", "5.2e-29", "", "NR", "KAL1227996.1", "6334", "g8063", "i0", "61.4", "22.5529411764706", "83", "32", "97.6", "0", "7", "255", "1016", "1098", "KAL1227996.1 ATP-dependent RNA helicase [Trichinella spiralis]", "diamond", "5751", "119", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Enoplea", "Trichinellida", "Trichinellidae", "Trichinella", "Trichinella spiralis"], [30727041, "PRJNA929522_S_NODE_1914_length_480_cov_2.368550_g1844_i0", "PRJNA929522", "1914", "480", "2.36855", "11.36904", "Rhabditida", "6236", "Nematoda", "Nematoda", "93.2", "3.81e-19", "", "NR", "NP_001369965.1", "6239", "g1844", "i0", "77.1", "3.70625", "48", "11", "30", "0", "2", "145", "298", "345", "NP_001369965.1 Peptidase C1A papain C-terminal domain-containing protein [Caenorhabditis elegans]", "diamond", "1779", "93.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis elegans"], [30821855, "PRJNA929522_S_NODE_3534_length_358_cov_1.059649_g3464_i0", "PRJNA929522", "3534", "358", "1.059649", "3.7935434200000002", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "124", "2.1000000000000002e-30", "", "NR", "KAI1725864.1", "166010", "g3464", "i0", "52.9", "5.99162011173184", "119", "55", "98.9", "1", "4", "357", "527", "645", "KAI1725864.1 anticodon binding domain-containing protein [Ditylenchus destructor]", "diamond", "2145", "125", "0.992", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Anguinidae", "Ditylenchus", "Ditylenchus destructor"], [31169200, "PRJNA929522_S_NODE_4595_length_320_cov_1.595142_g4525_i0", "PRJNA929522", "4595", "320", "1.595142", "5.1044544", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "130", "6.149999999999999e-35", "", "NR", "KAH7715620.1", "70226", "g4525", "i0", "63.5", "29.109375", "85", "29", "79.7", "1", "21", "275", "165", "247", "KAH7715620.1 ISP-1 protein [Aphelenchoides avenae]", "diamond", "9315", "130", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Aphelenchoididae", "Aphelenchoides", "Aphelenchoides avenae"], [31352133, "PRJNA929522_S_NODE_3116_length_379_cov_2.238562_g3046_i0", "PRJNA929522", "3116", "379", "2.238562", "8.48414998", "Halicephalobus sp. NKZ332", "2598192", "Nematoda", "Nematoda", "56.6", "1.64e-6", "", "NR", "KAE9546676.1", "2598192", "g3046", "i0", "50", "0.66490765171504", "42", "21", "33.2", "0", "2", "127", "229", "270", "KAE9546676.1 hypothetical protein FO519_010112, partial [Halicephalobus sp. NKZ332]", "diamond", "252", "56.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Halicephalobus", "Halicephalobus sp. NKZ332"], [31833425, "PRJNA929522_S_NODE_5617_length_296_cov_3.107623_g5547_i0", "PRJNA929522", "5617", "296", "3.107623", "9.19856408", "Metazoa", "33208", "Nematoda", "Nematoda", "63.5", "3.11e-9", "", "NR", "KRZ67201.1", "268474", "g5547", "i0", "41.9", "4.51013513513514", "93", "49", "90.2", "2", "271", "5", "58", "149", "KRZ67201.1 Cathepsin B-like cysteine proteinase, partial [Trichinella papuae]", "diamond", "1335", "63.9", "0.993740219092332", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Enoplea", "Trichinellida", "Trichinellidae", "Trichinella", "Trichinella papuae"], [31889701, "PRJNA929522_S_NODE_1677_length_511_cov_3.363014_g1607_i0", "PRJNA929522", "1677", "511", "3.363014", "17.18500154", "Steinernema hermaphroditum", "289476", "Nematoda", "Nematoda", "154", "9.43e-40", "", "NR", "KAK0406416.1", "289476", "g1607", "i0", "45.2", "3.67514677103718", "157", "86", "92.2", "0", "7", "477", "700", "856", "KAK0406416.1 hypothetical protein QR680_018562 [Steinernema hermaphroditum]", "diamond", "1878", "154", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Steinernematidae", "Steinernema", "Steinernema hermaphroditum"], [32055016, "PRJNA929522_S_NODE_2138_length_454_cov_2.178478_g2068_i0", "PRJNA929522", "2138", "454", "2.178478", "9.89029012", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "114", "1.05e-28", "", "NR", "KAH7729322.1", "70226", "g2068", "i0", "53.5", "6.83920704845815", "114", "46", "75.3", "3", "432", "91", "7", "113", "KAH7729322.1 protein synthesis factor [Aphelenchoides avenae]", "diamond", "3105", "114", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Aphelenchoididae", "Aphelenchoides", "Aphelenchoides avenae"], [32396124, "PRJNA929522_S_NODE_9199_length_246_cov_2.196532_g9129_i0", "PRJNA929522", "9199", "246", "2.196532", "5.40346872", "Caenorhabditis briggsae", "6238", "Nematoda", "Nematoda", "58.5", "6.48e-8", "", "NR", "XP_045096311.1", "6238", "g9129", "i0", "61.5", "3.34146341463415", "39", "15", "47.6", "0", "244", "128", "209", "247", "XP_045096311.1 Protein CBG17829 [Caenorhabditis briggsae]", "diamond", "822", "58.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"]], "truncated": false, "filtered_table_rows_count": 23, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA929522", "p1": "Nematoda"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda", "results": [{"value": "PRJNA929522", "label": "PRJNA929522", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Nematoda", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda", "results": [{"value": "diamond", "label": "diamond", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA929522&tax_phylum=Nematoda", "results": [{"value": "Nematoda", "label": "Nematoda", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA929522", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 235.3626100011752}