{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA917598\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Campylobacterota\"", "rows": [[5999719, "PRJNA917598_P_NODE_61925_length_287_cov_1.785047_g60981_i0", "PRJNA917598", "61925", "287", "1.785047", "5.12308489", "Arcobacter sp. FWKO B", "2593672", "Bacteria", "Bacteria", "52.8", "0.027", "", "NTclustered", "gi|1913474794|gb|CP041403.1|", "2593672", "g60981", "i0", "100", "0.0975609756097561", "28", "0", "10", "0", "15", "42", "1137597", "1137570", "Arcobacter sp. FWKO B chromosome", "blastn", "28", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter sp. FWKO B"], [9825034, "PRJNA917598_P_NODE_93708_length_242_cov_0.911243_g92764_i0", "PRJNA917598", "93708", "242", "0.911243", "2.20520806", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "131", "4.91e-36", "", "NR", "MDR3346663.1", "2268179", "g92764", "i0", "91.3", "2.51652892561983", "69", "6", "85.5", "0", "240", "34", "161", "229", "MDR3346663.1 RelA/SpoT domain-containing protein [Campylobacteraceae bacterium]", "diamond", "609", "132", "0.992424242424242", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", null, "Campylobacteraceae bacterium"], [15279240, "PRJNA917598_P_NODE_36852_length_378_cov_1.514754_g35908_i0", "PRJNA917598", "36852", "378", "1.514754", "5.72577012", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "101", "1.02e-22", "", "NR", "KIM09966.1", "1539064", "g35908", "i0", "56.4", "1.88095238095238", "78", "34", "61.9", "0", "235", "2", "2", "79", "KIM09966.1 MAG: aminotransferase [Sulfurovum sp. FS06-10]", "diamond", "711", "102", "0.990196078431373", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurovaceae", "Sulfurovum", "Sulfurovum sp. FS06-10"], [26644538, "PRJNA917598_P_NODE_5421_length_1051_cov_2.012270_g4716_i0", "PRJNA917598", "5421", "1051", "2.01227", "21.1489577", "Campylobacterales bacterium", "2268180", "Bacteria", "Bacteria", "88.6", "1.57e-15", "", "NR", "HIP02110.1", "2268180", "g4716", "i0", "57.3", "0.214081826831589", "75", "32", "21.4", "0", "225", "1", "1", "75", "HIP02110.1 DNA alkylation repair protein [Campylobacterales bacterium]", "diamond", "225", "88.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", null, null, "Campylobacterales bacterium"], [28453286, "PRJNA917598_P_NODE_65286_length_281_cov_1.480769_g64342_i0", "PRJNA917598", "65286", "281", "1.480769", "4.16096089", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "139", "1.75e-39", "", "NR", "WP_301346947.1", "28197", "g64342", "i0", "69.6", "5.90391459074733", "92", "25", "98.2", "1", "1", "276", "86", "174", "WP_301346947.1 acyltransferase [Aliarcobacter butzleri]", "diamond", "1659", "140", "0.992857142857143", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Aliarcobacter", "Aliarcobacter butzleri"], [29014490, "PRJNA917598_P_NODE_48908_length_328_cov_1.207843_g47964_i0", "PRJNA917598", "48908", "328", "1.207843", "3.96172504", "Sulfurospirillum sp. UCH", "2053622", "Bacteria", "Bacteria", "160", "2.2199999999999996e-47", "", "NR", "WP_067178248.1", "1581011", "g47964", "i0", "81.5", "7.91158536585366", "108", "20", "98.8", "0", "324", "1", "1", "108", "WP_067178248.1 TMEM165/GDT1 family protein [Sulfurospirillum sp. UCH001]", "diamond", "2595", "160", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurospirillaceae", "Sulfurospirillum", "Sulfurospirillum sp. UCH001"], [30150809, "PRJNA917598_P_NODE_84712_length_248_cov_0.880000_g83768_i0", "PRJNA917598", "84712", "248", "0.88", "2.1824", "Arcobacteraceae bacterium", "2808971", "Bacteria", "Bacteria", "67", "3.12e-11", "", "NR", "MCD4757232.1", "2808971", "g83768", "i0", "51.5", "1.81451612903226", "68", "30", "79.8", "2", "2", "199", "96", "162", "MCD4757232.1 TIGR02646 family protein [Arcobacteraceae bacterium]", "diamond", "450", "67", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", null, "Arcobacteraceae bacterium"], [30348418, "PRJNA917598_P_NODE_34672_length_390_cov_1.447950_g33728_i0", "PRJNA917598", "34672", "390", "1.44795", "5.647005", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "50.4", "4e-5", "", "NR", "WP_208350301.1", "210", "g33728", "i0", "32.4", "2", "68", "46", "52.3", "0", "204", "1", "22", "89", "WP_208350301.1 hypothetical protein, partial [Helicobacter pylori]", "diamond", "780", "50.8", "0.992125984251969", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30537479, "PRJNA917598_P_NODE_96453_length_238_cov_2.333333_g95509_i0", "PRJNA917598", "96453", "238", "2.333333", "5.55333254", "Bacteria", "2", "Bacteria", "Bacteria", "56.6", "4.38e-7", "", "NR", "WP_273404694.1", "522485", "g95509", "i0", "57.8", "2.47058823529412", "45", "19", "56.7", "0", "236", "102", "525", "569", "WP_273404694.1 EcoAI/FtnUII family type I restriction enzme subunit R [Campylobacter avium]", "diamond", "588", "56.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter avium"], [31668035, "PRJNA917598_P_NODE_69137_length_274_cov_1.149254_g68193_i0", "PRJNA917598", "69137", "274", "1.149254", "3.14895596", "Sulfurimonas sp.", "2022749", "Bacteria", "Bacteria", "68.6", "9.96e-13", "", "NR", "WP_321779451.1", "2022749", "g68193", "i0", "54.5", "0.722627737226277", "66", "30", "72.3", "0", "5", "202", "31", "96", "WP_321779451.1 DUF1778 domain-containing protein [Sulfurimonas sp.]", "diamond", "198", "68.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurimonadaceae", "Sulfurimonas", "Sulfurimonas sp."], [31857795, "PRJNA917598_P_NODE_7397_length_885_cov_4.996305_g6593_i0", "PRJNA917598", "7397", "885", "4.996305", "44.21729925", "Halarcobacter sp.", "2321133", "Bacteria", "Bacteria", "110", "9.98e-25", "", "NR", "WP_320035457.1", "2321133", "g6593", "i0", "33.3", "2.59661016949153", "276", "161", "91.2", "11", "50", "856", "10", "269", "WP_320035457.1 phosphodiester glycosidase family protein [Halarcobacter sp.]", "diamond", "2298", "110", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Halarcobacter", "Halarcobacter sp."], [32308463, "PRJNA917598_P_NODE_6979_length_914_cov_1.969084_g6197_i0", "PRJNA917598", "6979", "914", "1.969084", "17.99742776", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "79", "3.31e-12", "", "NR", "WP_072680222.1", "1898176", "g6197", "i0", "27.4", "3.99124726477024", "219", "157", "71.2", "2", "656", "6", "357", "575", "WP_072680222.1 EAL domain-containing protein [Arcobacter sp. LA11]", "diamond", "3648", "79", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter sp. LA11"], [32837331, "PRJNA917598_P_NODE_50940_length_321_cov_1.201613_g49996_i0", "PRJNA917598", "50940", "321", "1.201613", "3.85717773", "Sulfurovum sp.", "1969726", "Bacteria", "Bacteria", "87", "1.72e-19", "", "NR", "MDD3500781.1", "1969726", "g49996", "i0", "55.1", "0.831775700934579", "89", "27", "83.2", "1", "43", "309", "24", "99", "MDD3500781.1 hypothetical protein [Sulfurovum sp.]", "diamond", "267", "87", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurovaceae", "Sulfurovum", "Sulfurovum sp."]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA917598", "p1": "Pseudomonadati", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA917598", "label": "PRJNA917598", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA917598&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 428.03510499652475}