{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA914897\", tax_clade = \"PVC group\" and tax_phylum = \"Chlamydiota\"", "rows": [[26612828, "PRJNA914897_P_NODE_28701_length_297_cov_1.272321_g28277_i0", "PRJNA914897", "28701", "297", "1.272321", "3.77879337", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "50.1", "1.75e-4", "", "NR", "NGX50374.1", "2081524", "g28277", "i0", "46.2", "1.08080808080808", "39", "21", "39.4", "0", "230", "114", "34", "72", "NGX50374.1 Ribosomal RNA small subunit methyltransferase B [Chlamydiota bacterium]", "diamond", "321", "50.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [26968545, "PRJNA914897_P_NODE_3902_length_1013_cov_42.043617_g3615_i0", "PRJNA914897", "3902", "1013", "42.043617", "425.90184021", "root", "1", "Root_unresolved", "Root_unresolved", "257", "2.5399999999999992e-81", "", "NR", 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"g7727", "i0", "50", "0.221565731166913", "50", "25", "22.2", "0", "110", "259", "26", "75", "MCB1084365.1 hypothetical protein [Simkania sp.]", "diamond", "150", "56.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [29613616, "PRJNA914897_P_NODE_29750_length_289_cov_4.453704_g29326_i0", "PRJNA914897", "29750", "289", "4.453704", "12.87120456", "Simkania sp.", "34094", "Bacteria", "Bacteria", "46.2", "0.00169", "", "NR", "MCB1084323.1", "34094", "g29326", "i0", "73.9", "0.487889273356401", "23", "6", "23.9", "0", "131", "63", "91", "113", "MCB1084323.1 AMP-binding protein [Simkania sp.]", "diamond", "141", "46.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [29708296, "PRJNA914897_P_NODE_14230_length_475_cov_25.594527_g13808_i0", "PRJNA914897", "14230", "475", "25.594527", "121.57400325", 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"Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8"], [30150685, "PRJNA914897_P_NODE_22872_length_347_cov_1.105839_g22448_i0", "PRJNA914897", "22872", "347", "1.105839", "3.83726133", "Parachlamydia sp.", "2052048", "Bacteria", "Bacteria", "72.4", "9.98e-13", "", "NR", "MCE2982696.1", "2052048", "g22448", "i0", "50.7", "4.90201729106628", "71", "25", "57.1", "3", "149", "346", "156", "221", "MCE2982696.1 DNA alkylation repair protein [Parachlamydia sp.]", "diamond", "1701", "72.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia sp."], [30341044, "PRJNA914897_P_NODE_4172_length_980_cov_9.647189_g3870_i0", "PRJNA914897", "4172", "980", "9.647189", "94.5424522", "Simkania sp.", "34094", "Bacteria", "Bacteria", "256", "7.03e-81", "", "NR", "MCB1084310.1", "34094", "g3870", "i0", "73.3", "0.52653061224489806", "172", "46", "52.7", "0", "699", "184", "1", "172", "MCB1084310.1 hypothetical protein [Simkania sp.]", "diamond", "516", "256", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [31035919, "PRJNA914897_P_NODE_22695_length_348_cov_2.767273_g22271_i0", "PRJNA914897", "22695", "348", "2.767273", "9.63011004", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "72", "7.77e-14", "", "NR", "MCP5470423.1", "2047757", "g22271", "i0", "81", "0.362068965517241", "42", "8", "36.2", "0", "329", "204", "1", "42", "MCP5470423.1 DUF2039 domain-containing protein [Chlamydiales bacterium]", "diamond", "126", "72", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [31067379, "PRJNA914897_P_NODE_14675_length_466_cov_1.582697_g14253_i0", "PRJNA914897", "14675", "466", "1.582697", "7.37536802", "Candidatus Amphrikana amoebophyrae", "3076870", "Bacteria", "Bacteria", "50.4", "5.99e-4", "", "NR", "MDN3504659.1", "3076870", "g14253", "i0", "55.3", "1.15236051502146", "47", "18", "29.6", "2", "277", "414", "50", "94", "MDN3504659.1 glycosyltransferase family A protein [Candidatus Amphrikana amoebophyrae]", "diamond", "537", "50.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Candidatus Amphrikana", "Candidatus Amphrikana amoebophyrae"], [31699693, "PRJNA914897_P_NODE_17277_length_417_cov_1.912791_g16855_i0", "PRJNA914897", "17277", "417", "1.912791", "7.97633847", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "77.4", "1.84e-13", "", "NR", "HSX03456.1", "2047756", "g16855", "i0", "51.2", "1.26618705035971", "84", "36", "59.7", "3", "275", "27", "44", "123", "HSX03456.1 glycosyltransferase family A protein [Rhabdochlamydiaceae bacterium]", "diamond", "528", "77.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [31699709, "PRJNA914897_P_NODE_3117_length_1118_cov_9.470813_g2863_i0", "PRJNA914897", "3117", "1118", "9.470813", "105.88368934", "Chlamydiales bacterium SCGC AG-11", "2047757", "Bacteria", "Bacteria", "48.9", "0.0288", "", "NR", "SCA63082.1", "1871324", "g2863", "i0", "30.3", "0.238819320214669", "89", "54", "21.7", "1", "628", "870", "259", "347", "SCA63082.1 Uncharacterized protein SCG7109_AH_00380 [Chlamydiales bacterium SCGC AG-110-M15]", "diamond", "267", "48.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium SCGC AG-110-M15"], [32015988, "PRJNA914897_P_NODE_7338_length_720_cov_3.996909_g6947_i0", "PRJNA914897", "7338", "720", "3.996909", "28.7777448", "Parachlamydia sp.", "2052048", "Bacteria", "Bacteria", "47", "0.0441", "", "NR", "MCE5316929.1", "2052048", "g6947", "i0", "57.6", "0.1375", "33", "14", "13.8", "0", "518", "420", "220", "252", "MCE5316929.1 C78 family peptidase [Parachlamydia sp.]", "diamond", "99", "47", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia sp."], [32174435, "PRJNA914897_P_NODE_36218_length_252_cov_1.625698_g35794_i0", "PRJNA914897", "36218", "252", "1.625698", "4.09675896", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "43.5", "0.0215", "", "NR", "MDF2577682.1", "2047757", "g35794", "i0", "36.9", "0.773809523809524", "65", "36", "75", "2", "17", "205", "144", "205", "MDF2577682.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "195", "43.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [32237798, "PRJNA914897_P_NODE_10538_length_577_cov_2.190476_g10120_i0", "PRJNA914897", "10538", "577", "2.190476", "12.63904652", "Simkania sp.", "34094", "Bacteria", "Bacteria", "68.6", "1.88e-10", "", "NR", "MCB1084431.1", "34094", "g10120", "i0", "45.1", "0.369150779896014", "71", "39", "36.9", "0", "413", "201", "55", "125", "MCB1084431.1 hypothetical protein [Simkania sp.]", "diamond", "213", "68.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [32237808, "PRJNA914897_P_NODE_22158_length_354_cov_1.099644_g21734_i0", "PRJNA914897", "22158", "354", "1.099644", "3.89273976", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "69.7", "6.2e-13", "", "NR", "MCP5470428.1", "2047757", "g21734", "i0", "47.9", "0.601694915254237", "71", "36", "59.3", "1", "349", "140", "1", "71", "MCP5470428.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "213", "69.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [32743003, "PRJNA914897_P_NODE_15000_length_459_cov_6.971503_g14578_i0", "PRJNA914897", "15000", "459", "6.971503", "31.99919877", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "111", "7.58e-28", "", "NR", "MCP5470420.1", "2047757", "g14578", "i0", "49.2", "1.59477124183007", "124", "62", "80.4", "1", "459", "91", "1", "124", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "732", "111", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [32743020, "PRJNA914897_P_NODE_34400_length_263_cov_1.115789_g33976_i0", "PRJNA914897", "34400", "263", "1.115789", "2.93452507", "Simkania sp.", "34094", "Bacteria", "Bacteria", "70.5", "6.49e-13", "", "NR", "MCB1084323.1", "34094", "g33976", "i0", "69", "1.6425855513308", "42", "13", "47.9", "0", "131", "256", "81", "122", "MCB1084323.1 AMP-binding protein [Simkania sp.]", "diamond", "432", "70.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA914897", "p1": "PVC group", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA914897", "label": "PRJNA914897", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "diamond", "label": "diamond", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA914897&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 354.2126480024308}