{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA896973\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Spirochaetota\"", "rows": [[7251283, "PRJNA896973_P_NODE_20466_length_257_cov_1.451087_g20372_i0", "PRJNA896973", "20466", "257", "1.451087", "3.72929359", "Treponema vincentii", "69710", "Bacteria", "Bacteria", "270", "5.93e-68", "", "NTclustered", "gi|2034589463|gb|CP050497.1|", "69710", "g20372", "i0", "88.991", "2.61089494163424", "218", "24", "85", "0", "40", "257", "2472229", "2472446", "Treponema vincentii strain OMZ 806 chromosome, complete genome", "blastn", "671", "270", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema vincentii"], [13997949, "PRJNA896973_P_NODE_29151_length_211_cov_16.181159_g29057_i0", "PRJNA896973", "29151", "211", "16.181159", "34.14224549", "Spirochaetia", "203692", "Bacteria", "Bacteria", "313", "7.7e-81", "", "NTclustered", "gi|468269|gb|L31543.1|BVNFSRR", "34097", "g29057", "i0", "93.365", "108.483412322275", "211", "14", "100", "0", "1", "211", "13", "223", "Brevinema andersonii (strain FS47) ribosomal RNA", "blastn", "22890", "315", "0.993650793650794", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Brevinematales", "Brevinemataceae", "Brevinema", "Brevinema andersonii"], [17451302, "PRJNA896973_P_NODE_18614_length_267_cov_8.077320_g18520_i0", "PRJNA896973", "18614", "267", "8.07732", "21.5664444", "Brevinematales bacterium NS", "2979017", "Bacteria", "Bacteria", "243", "1.3500000000000004e-59", "", "NTclustered", "gi|2305034691|gb|CP053071.1|", "2979017", "g18520", "i0", "83.459", "232.423220973783", "266", "39", "99", "4", "4", "267", "667662", "667924", "Brevinematales bacterium NS chromosome, complete genome", "blastn", "62057", "243", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Brevinematales", null, null, "Brevinematales bacterium NS"], [28318976, "PRJNA896973_P_NODE_25806_length_244_cov_1.801170_g25712_i0", "PRJNA896973", "25806", "244", "1.80117", "4.3948548", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "140", "1.28e-38", "", "NR", "MDK2818532.1", "2202144", "g25712", "i0", "90", "0.983606557377049", "80", "8", "98.4", "0", "241", "2", "22", "101", "MDK2818532.1 flagellin [Spirochaetota bacterium]", "diamond", "240", "140", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [29581633, "PRJNA896973_P_NODE_11670_length_323_cov_1.636000_g11576_i0", "PRJNA896973", "11670", "323", "1.636", "5.28428", "Brevinema andersonii", "34097", "Bacteria", "Bacteria", "160", "2.74e-46", "", "NR", "WP_092318482.1", "34097", "g11576", "i0", "77.6", "1.98761609907121", "107", "24", "99.4", "0", "323", "3", "180", "286", "WP_092318482.1 flagellin [Brevinema andersonii]", "diamond", "642", "160", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Brevinematales", "Brevinemataceae", "Brevinema", "Brevinema andersonii"], [30466770, "PRJNA896973_P_NODE_7573_length_387_cov_2.372611_g7479_i0", "PRJNA896973", "7573", "387", "2.372611", "9.18200457", "Treponema sp.", "166", "Bacteria", "Bacteria", "45.8", "0.00915", "", "NR", "MCL2374892.1", "166", "g7479", "i0", "35.8", "1.52713178294574", "67", "37", "48.8", "2", "282", "94", "66", "130", "MCL2374892.1 DUF4338 domain-containing protein [Treponema sp.]", "diamond", "591", "45.8", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."]], "truncated": false, "filtered_table_rows_count": 6, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA896973", "p1": "Pseudomonadati", "p2": "Spirochaetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "PRJNA896973", "label": "PRJNA896973", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Spirochaetota", "label": "Spirochaetota", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA896973&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 388.7014199999612}