{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA879314\" and tax_phylum = \"Fibrobacterota\"", "rows": [[9785750, "PRJNA879314_P_NODE_788_length_475_cov_1.345771_g738_i0", "PRJNA879314", "788", "475", "1.345771", "6.39241225", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "233", "4.91e-76", "", "NR", "WP_173475114.1", "833", "g738", "i0", "95.3", "0.802105263157895", "127", "6", "80.2", "0", "3", "383", "10", "136", "WP_173475114.1 DUF4054 domain-containing protein [Fibrobacter succinogenes]", "diamond", "381", "233", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"], [18709231, "PRJNA879314_P_NODE_4075_length_259_cov_1.220430_g4025_i0", "PRJNA879314", "4075", "259", "1.22043", "3.1609137", "Fibrobacterales bacterium", "2478481", "Bacteria", "Bacteria", "162", "1.45e-45", "", "NR", "MBO7130811.1", "2478481", "g4025", "i0", "95.3", "0.984555984555985", "85", "4", "98.5", "0", "3", "257", "348", "432", "MBO7130811.1 transposase [Fibrobacterales bacterium]", "diamond", "255", "162", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", null, null, "Fibrobacterales bacterium"], [26991836, "PRJNA879314_P_NODE_9382_length_245_cov_0.906977_g9332_i0", "PRJNA879314", "9382", "245", "0.906977", "2.22209365", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "126", "2.2299999999999993e-34", "", "NR", "MBQ3839585.1", "35828", "g9332", "i0", "76.3", "0.979591836734694", "80", "19", "98", "0", "242", "3", "4", "83", "MBQ3839585.1 hypothetical protein [Fibrobacter sp.]", "diamond", "240", "126", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [27750514, "PRJNA879314_P_NODE_2344_length_311_cov_1.441176_g2294_i0", "PRJNA879314", "2344", "311", "1.441176", "4.48205736", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "196", "1.4999999999999999e-58", "", "NR", "WP_291024815.1", "35828", "g2294", "i0", "97.1", "0.993569131832797", "103", "3", "99.4", "0", "310", "2", "305", "407", "WP_291024815.1 DUF1073 domain-containing protein [Fibrobacter sp.]", "diamond", "309", "196", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [27939830, "PRJNA879314_P_NODE_11045_length_242_cov_0.923077_g10995_i0", "PRJNA879314", "11045", "242", "0.923077", "2.23384634", "Fibrobacteria bacterium", "2725311", "Bacteria", "Bacteria", "105", "1.75e-24", "", "NR", "HQF53583.1", "2725311", "g10995", "i0", "92.5", "0.991735537190083", "80", "6", "99.2", "0", "2", "241", "245", "324", "HQF53583.1 AgmX/PglI C-terminal domain-containing protein [Fibrobacteria bacterium]", "diamond", "240", "105", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", null, null, null, "Fibrobacteria bacterium"], [27971254, "PRJNA879314_P_NODE_10245_length_244_cov_0.894737_g10195_i0", "PRJNA879314", "10245", "244", "0.894737", "2.18315828", "uncultured Fibrobacter sp.", "261512", "Bacteria", "Bacteria", "85.1", "1.94e-17", "", "NR", "WP_297702366.1", "261512", "g10195", "i0", "58.8", "1.19262295081967", "97", "20", "95.9", "3", "234", "1", "1", "96", "WP_297702366.1 TrmH family RNA methyltransferase, partial [uncultured Fibrobacter sp.]", "diamond", "291", "85.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "uncultured Fibrobacter sp."], [28003090, "PRJNA879314_P_NODE_8345_length_247_cov_0.896552_g8295_i0", "PRJNA879314", "8345", "247", "0.896552", "2.21448344", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "126", "3.21e-34", "", "NR", "MBO7413999.1", "35828", "g8295", "i0", "72.8", "0.983805668016194", "81", "22", "98.4", "0", "246", "4", "69", "149", "MBO7413999.1 hypothetical protein [Fibrobacter sp.]", "diamond", "243", "126", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [28066001, "PRJNA879314_P_NODE_8805_length_246_cov_0.901734_g8755_i0", "PRJNA879314", "8805", "246", "0.901734", "2.21826564", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "43.9", "0.0152", "", "NR", "MBO4712786.1", "35828", "g8755", "i0", "35.7", "1.02439024390244", "84", "47", "97.6", "4", "4", "243", "309", "389", "MBO4712786.1 hypothetical protein [Fibrobacter sp.]", "diamond", "252", "43.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [28129269, "PRJNA879314_P_NODE_8645_length_246_cov_0.901734_g8595_i0", "PRJNA879314", "8645", "246", "0.901734", "2.21826564", "Fibrobacteria bacterium", "2725311", "Bacteria", "Bacteria", "142", "6.029999999999998e-42", "", "NR", "HQF54261.1", "2725311", "g8595", "i0", "89.5", "0.926829268292683", "76", "8", "92.7", "0", "1", "228", "45", "120", "HQF54261.1 hypothetical protein [Fibrobacteria bacterium]", "diamond", "228", "142", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", null, null, null, "Fibrobacteria bacterium"], [28602891, "PRJNA879314_P_NODE_6367_length_250_cov_0.881356_g6317_i0", "PRJNA879314", "6367", "250", "0.881356", "2.20339", "Fibrobacteria bacterium", "2725311", "Bacteria", "Bacteria", "67.4", "7.65e-11", "", "NR", "MCB9495955.1", "2725311", "g6317", "i0", "57.8", "0.54", "45", "19", "54", "0", "246", "112", "337", "381", "MCB9495955.1 DUF116 domain-containing protein [Fibrobacteria bacterium]", "diamond", "135", "67.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", null, null, null, "Fibrobacteria bacterium"], [28666046, "PRJNA879314_P_NODE_2807_length_292_cov_1.424658_g2757_i0", "PRJNA879314", "2807", "292", "1.424658", "4.16000136", "uncultured Fibrobacter sp.", "261512", "Bacteria", "Bacteria", "178", "1.75e-51", "", "NR", "WP_295055254.1", "261512", "g2757", "i0", "87.6", "0.996575342465753", "97", "12", "99.7", "0", "291", "1", "373", "469", "WP_295055254.1 baseplate J/gp47 family protein [uncultured Fibrobacter sp.]", "diamond", "291", "178", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "uncultured Fibrobacter sp."], [29549805, "PRJNA879314_P_NODE_2350_length_311_cov_1.168067_g2300_i0", "PRJNA879314", "2350", "311", "1.168067", "3.63268837", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "195", "1.3599999999999998e-56", "", "NR", "WP_291024813.1", "35828", "g2300", "i0", "96.1", "0.993569131832797", "103", "4", "99.4", "0", "3", "311", "71", "173", "WP_291024813.1 phage minor head protein [Fibrobacter sp.]", "diamond", "309", "195", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [29549815, "PRJNA879314_P_NODE_7730_length_248_cov_0.891429_g7680_i0", "PRJNA879314", "7730", "248", "0.891429", "2.21074392", "Fibrobacteria bacterium", "2725311", "Bacteria", "Bacteria", "73.9", "3.22e-13", "", "NR", "HKP98437.1", "2725311", "g7680", "i0", "78.7", "0.568548387096774", "47", "9", "56.9", "1", "246", "106", "326", "371", "HKP98437.1 hypothetical protein [Fibrobacteria bacterium]", "diamond", "141", "73.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", null, null, null, "Fibrobacteria bacterium"], [29992183, "PRJNA879314_P_NODE_11271_length_242_cov_0.923077_g11221_i0", "PRJNA879314", "11271", "242", "0.923077", "2.23384634", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "160", "1.55e-47", "", "NR", "WP_290941217.1", "35828", "g11221", "i0", "95", "2.97520661157025", "80", "4", "99.2", "0", "241", "2", "28", "107", "WP_290941217.1 hypothetical protein [Fibrobacter sp.]", "diamond", "720", "160", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [30403299, "PRJNA879314_P_NODE_7553_length_248_cov_0.891429_g7503_i0", "PRJNA879314", "7553", "248", "0.891429", "2.21074392", "Fibrobacter sp.", "35828", "Bacteria", "Bacteria", "163", "2.64e-46", "", "NR", "WP_291024815.1", "35828", "g7503", "i0", "100", "3.96774193548387", "82", "0", "99.2", "0", "3", "248", "209", "290", "WP_291024815.1 DUF1073 domain-containing protein [Fibrobacter sp.]", "diamond", "984", "163", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [30908525, "PRJNA879314_P_NODE_10274_length_244_cov_0.859649_g10224_i0", "PRJNA879314", "10274", "244", "0.859649", "2.09754356", "Fibrobacterales bacterium", "2478481", "Bacteria", "Bacteria", "72", "1.86e-12", "", "NR", "MBP5189129.1", "2478481", "g10224", "i0", "52.4", "1.00819672131148", "82", "38", "99.6", "1", "243", "1", "111", "192", "MBP5189129.1 carbohydrate-binding protein [Fibrobacterales bacterium]", "diamond", "246", "72", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", null, null, "Fibrobacterales bacterium"], [30908537, "PRJNA879314_P_NODE_6714_length_249_cov_0.886364_g6664_i0", "PRJNA879314", "6714", "249", "0.886364", "2.20704636", "Fibrobacterota bacterium", "2052160", "Bacteria", "Bacteria", "150", "2.41e-41", "", "NR", "MBW8890412.1", "2052160", "g6664", "i0", "94", "1", "83", "5", "100", "0", "249", "1", "84", "166", "MBW8890412.1 sigma-54-dependent Fis family transcriptional regulator [Fibrobacterota bacterium]", "diamond", "249", "150", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", null, null, null, null, "Fibrobacterota bacterium"], [31572455, "PRJNA879314_P_NODE_10656_length_243_cov_0.917647_g10606_i0", "PRJNA879314", "10656", "243", "0.917647", "2.22988221", "Fibrobacteria bacterium", "2725311", "Bacteria", "Bacteria", "110", "4.75e-28", "", "NR", "HQF53842.1", "2725311", "g10606", "i0", "70.9", "0.975308641975309", "79", "23", "97.5", "0", "4", "240", "44", "122", "HQF53842.1 pyridoxal phosphate-dependent aminotransferase [Fibrobacteria bacterium]", "diamond", "237", "110", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", null, null, null, "Fibrobacteria bacterium"], [31675039, "PRJNA879314_P_NODE_10017_length_244_cov_0.912281_g9967_i0", "PRJNA879314", "10017", "244", "0.912281", "2.22596564", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "156", "8.18e-44", "", "NR", "WP_290953281.1", "35828", "g9967", "i0", "93.8", "59.7540983606557", "81", "5", "99.6", "0", "244", "2", "57", "137", "WP_290953281.1 ABC transporter ATP-binding protein [Fibrobacter sp.]", "diamond", "14580", "157", "0.993630573248408", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter sp."], [32015135, "PRJNA879314_P_NODE_10358_length_243_cov_0.917647_g10308_i0", "PRJNA879314", "10358", "243", "0.917647", "2.22988221", "Fibrobacterota bacterium", "2052160", "Bacteria", "Bacteria", "124", "6.989999999999999e-31", "", "NR", "MEK7391542.1", "2052160", "g10308", "i0", "69.6", "0.975308641975309", "79", "24", "97.5", "0", "241", "5", "414", "492", "MEK7391542.1 TonB-dependent receptor plug domain-containing protein [Fibrobacterota bacterium]", "diamond", "237", "124", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", null, null, null, null, "Fibrobacterota bacterium"], [32899325, "PRJNA879314_P_NODE_6840_length_249_cov_0.886364_g6790_i0", "PRJNA879314", "6840", "249", "0.886364", "2.20704636", "Fibrobacter succinogenes", "833", "Bacteria", "Bacteria", "85.5", "1.7e-17", "", "NR", "WP_173475118.1", "833", "g6790", "i0", "51.3", "0.939759036144578", "78", "35", "94", "1", "3", "236", "83", "157", "WP_173475118.1 DUF3383 family protein [Fibrobacter succinogenes]", "diamond", "234", "85.5", "1", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Fibrobacterales", "Fibrobacteraceae", "Fibrobacter", "Fibrobacter succinogenes"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA879314", "p1": "Fibrobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota", "results": [{"value": "PRJNA879314", "label": "PRJNA879314", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Fibrobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota", "results": [{"value": "FCB group", "label": "FCB group", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA879314&tax_phylum=Fibrobacterota", "results": [{"value": "Fibrobacterota", "label": "Fibrobacterota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA879314", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 303.4068940032739}