{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA876641\", tax_clade = \"PVC group\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[9781072, "PRJNA876641_P_NODE_20668_length_244_cov_2.485380_g20594_i0", "PRJNA876641", "20668", "244", "2.48538", "6.0643272", "Bacteria", "2", "Bacteria", "Bacteria", "112", "7.2099999999999985e-28", "", "NR", "MEK6230939.1", "1962973", "g20594", "i0", "60.3", "4.70901639344262", "78", "31", "95.9", "0", "235", "2", "1", "78", "MEK6230939.1 NAD(P)-dependent alcohol dehydrogenase [Luteolibacter sp.]", "diamond", "1149", "113", "0.991150442477876", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Luteolibacter", "Luteolibacter sp."], [17431450, "PRJNA876641_P_NODE_3114_length_416_cov_0.880466_g3040_i0", "PRJNA876641", "3114", "416", "0.880466", "3.66273856", "Candidatus Methylacidiphilales bacterium", "2720631", "Bacteria", "Bacteria", "195", "2.27e-57", "", "NR", "HSI86689.1", "2720631", "g3040", "i0", "70.3", "6.95913461538461", "138", "41", "99.5", "0", "2", "415", "191", "328", "HSI86689.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Candidatus Methylacidiphilales bacterium]", "diamond", "2895", "195", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Methylacidiphilae", "Methylacidiphilales", null, null, "Candidatus Methylacidiphilales bacterium"], [22916138, "PRJNA876641_P_NODE_18398_length_248_cov_0.880000_g18324_i0", "PRJNA876641", "18398", "248", "0.88", "2.1824", "Coraliomargarita", "442430", "Bacteria", "Bacteria", "244", "3.45e-60", "", "NTclustered", "gi|470486190|ref|NR_076741.1|", "395922", "g18324", "i0", "85.714", "229.112903225806", "238", "26", "95", "6", "3", "237", "1776", "1544", "Coraliomargarita akajimensis strain 04OKA010-24 23S ribosomal RNA gene, complete sequence", "blastn", "56820", "244", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Puniceicoccales", "Coraliomargaritaceae", "Coraliomargarita", "Coraliomargarita akajimensis"], [25465178, "PRJNA876641_P_NODE_3740_length_389_cov_1.439873_g3666_i0", "PRJNA876641", "3740", "389", "1.439873", "5.60110597", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "66.2", "9.3e-10", "", "NR", "RYD71398.1", "2026800", "g3666", "i0", "34.3", "1.34190231362468", "102", "66", "78.7", "1", "81", "386", "14", "114", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "522", "66.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [26770412, "PRJNA876641_P_NODE_21121_length_244_cov_0.900585_g21047_i0", "PRJNA876641", "21121", "244", "0.900585", "2.1974274", "Pelagicoccus mobilis", "415221", "Bacteria", "Bacteria", "62.4", "4.48e-9", "", "NR", "WP_200358271.1", "415221", "g21047", "i0", "44.4", "0.885245901639344", "72", "36", "86.1", "3", "217", "8", "420", "489", "WP_200358271.1 arylsulfatase [Pelagicoccus mobilis]", "diamond", "216", "62.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Puniceicoccales", "Pelagicoccaceae", "Pelagicoccus", "Pelagicoccus mobilis"], [27276610, "PRJNA876641_P_NODE_2863_length_428_cov_2.563380_g2789_i0", "PRJNA876641", "2863", "428", "2.56338", "10.9712664", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "129", "4.03e-33", "", "NR", "RYD71398.1", "2026800", "g2789", "i0", "55", "0.841121495327103", "120", "53", "83.4", "1", "3", "359", "242", "361", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "360", "129", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [27276617, "PRJNA876641_P_NODE_963_length_655_cov_2.962199_g892_i0", "PRJNA876641", "963", "655", "2.962199", "19.40240345", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "209", "5.699999999999999e-63", "", "NR", "MDH4476108.1", "2026800", "g892", "i0", "62.7", "2.28091603053435", "166", "61", "76", "1", "655", "158", "191", "355", "MDH4476108.1 alkene reductase [Verrucomicrobiaceae bacterium]", "diamond", "1494", "209", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [28065916, "PRJNA876641_P_NODE_11925_length_271_cov_1.333333_g11851_i0", "PRJNA876641", "11925", "271", "1.333333", "3.61333243", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "107", "1.49e-25", "", "NR", "HTG45312.1", "2499141", "g11851", "i0", "60", "0.940959409594096", "85", "34", "94.1", "0", "17", "271", "13", "97", "HTG45312.1 hypothetical protein [Verrucomicrobiia bacterium]", "diamond", "255", "107", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [28065930, "PRJNA876641_P_NODE_24045_length_229_cov_2.378205_g23971_i0", "PRJNA876641", "24045", "229", "2.378205", "5.44608945", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "68.9", "1.86e-11", "", "NR", "MBS0645922.1", "2026799", "g23971", "i0", "63.5", "0.681222707423581", "52", "19", "68.1", "0", "17", "172", "782", "833", "MBS0645922.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "156", "68.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [28886775, "PRJNA876641_P_NODE_9768_length_283_cov_2.004762_g9694_i0", "PRJNA876641", "9768", "283", "2.004762", "5.67347646", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "94.4", "4.43e-20", "", "NR", "MCB1205730.1", "2499141", "g9694", "i0", "54.3", "0.996466431095406", "94", "37", "99.6", "1", "283", "2", "201", "288", "MCB1205730.1 peroxiredoxin [Verrucomicrobiia bacterium]", "diamond", "282", "94.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [29076484, "PRJNA876641_P_NODE_22928_length_241_cov_2.619048_g22854_i0", "PRJNA876641", "22928", "241", "2.619048", "6.31190568", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "45.1", "0.00376", "", "NR", "MEI6341235.1", "2026799", "g22854", "i0", "41.4", "0.721991701244813", "58", "32", "69.7", "1", "208", "41", "109", "166", "MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium]", "diamond", "174", "45.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [29526504, "PRJNA876641_P_NODE_1790_length_514_cov_1.374150_g1716_i0", "PRJNA876641", "1790", "514", "1.37415", "7.063131", "Bacteria", "2", "Bacteria", "Bacteria", "63.2", "3.57e-8", "", "NR", "MBC8243713.1", "2026799", "g1716", "i0", "39.2", "4.65175097276265", "79", "48", "46.1", "0", "238", "2", "71", "149", "MBC8243713.1 Gfo/Idh/MocA family oxidoreductase [Verrucomicrobiota bacterium]", "diamond", "2391", "63.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [30000239, "PRJNA876641_P_NODE_10731_length_278_cov_1.243902_g10657_i0", "PRJNA876641", "10731", "278", "1.243902", "3.45804756", "Bacteria", "2", "Bacteria", "Bacteria", "95.5", "1.62e-20", "", "NR", "MCF6313004.1", "2026801", "g10657", "i0", "55.4", "5.9568345323741", "92", "41", "99.3", "0", "276", "1", "25", "116", "MCF6313004.1 FAD-dependent oxidoreductase [Verrucomicrobiales bacterium]", "diamond", "1656", "95.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [30908463, "PRJNA876641_P_NODE_14694_length_256_cov_1.278689_g14620_i0", "PRJNA876641", "14694", "256", "1.278689", "3.27344384", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "61.6", "9.64e-9", "", "NR", "MEZ5304281.1", "2026801", "g14620", "i0", "42.5", "0.9375", "80", "43", "93.8", "1", "254", "15", "145", "221", "MEZ5304281.1 hypothetical protein [Verrucomicrobiales bacterium]", "diamond", "240", "61.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [31035010, "PRJNA876641_P_NODE_18915_length_247_cov_0.885057_g18841_i0", "PRJNA876641", "18915", "247", "0.885057", "2.18609079", "Limisphaerales bacterium", "2052186", "Bacteria", "Bacteria", "78.6", "1.92e-15", "", "NR", "MEI9863482.1", "2052186", "g18841", "i0", "54.5", "0.801619433198381", "66", "30", "80.2", "0", "246", "49", "31", "96", "MEI9863482.1 hypothetical protein [Limisphaerales bacterium]", "diamond", "198", "78.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Limisphaerales", null, null, "Limisphaerales bacterium"], [31129117, "PRJNA876641_P_NODE_12615_length_267_cov_1.530928_g12541_i0", "PRJNA876641", "12615", "267", "1.530928", "4.08757776", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "68.9", "2.46e-11", "", "NR", "RYD71398.1", "2026800", "g12541", "i0", "55.4", "0.629213483146067", "56", "25", "62.9", "0", "6", "173", "147", "202", "RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium]", "diamond", "168", "68.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [31603908, "PRJNA876641_P_NODE_1416_length_560_cov_2.172485_g1343_i0", "PRJNA876641", "1416", "560", "2.172485", "12.165916", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "213", "4.36e-65", "", "NR", "RYD65414.1", "2026800", "g1343", "i0", "77.7", "0.696428571428571", "130", "29", "69.6", "0", "559", "170", "207", "336", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "390", "213", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [32078334, "PRJNA876641_P_NODE_12558_length_267_cov_2.097938_g12484_i0", "PRJNA876641", "12558", "267", "2.097938", "5.60149446", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "54.3", "3.73e-6", "", "NR", "MDH7503595.1", "2026799", "g12484", "i0", "54.2", "0.539325842696629", "48", "22", "53.9", "0", "82", "225", "34", "81", "MDH7503595.1 phosphatidylinositol-specific phospholipase C/glycerophosphodiester phosphodiesterase family protein [Verrucomicrobiota bacterium]", "diamond", "144", "54.3", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [32078346, "PRJNA876641_P_NODE_23918_length_233_cov_2.406250_g23844_i0", "PRJNA876641", "23918", "233", "2.40625", "5.6065625", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "70.1", "1.95e-12", "", "NR", "RYD36583.1", "2026800", "g23844", "i0", "61.5", "0.669527896995708", "52", "16", "61.8", "1", "6", "149", "167", "218", "RYD36583.1 MAG: Mpv17/PMP22 family protein [Verrucomicrobiaceae bacterium]", "diamond", "156", "70.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [32268403, "PRJNA876641_P_NODE_4418_length_366_cov_1.238908_g4344_i0", "PRJNA876641", "4418", "366", "1.238908", "4.53440328", "Haloferula luteola", "595692", "Bacteria", "Bacteria", "89.4", "1.77e-18", "", "NR", "WP_184015085.1", "595692", "g4344", "i0", "41.2", "3.71311475409836", "119", "66", "94.3", "1", "3", "347", "159", "277", "WP_184015085.1 choice-of-anchor A family protein [Haloferula luteola]", "diamond", "1359", "89.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Haloferula", "Haloferula luteola"], [32773361, "PRJNA876641_P_NODE_8820_length_289_cov_1.120370_g8746_i0", "PRJNA876641", "8820", "289", "1.12037", "3.2378693", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "89", "2.55e-18", "", "NR", "MEP6937692.1", "2201154", "g8746", "i0", "46.9", "1.99307958477509", "96", "50", "98.6", "1", "289", "5", "23", "118", "MEP6937692.1 fumarylacetoacetase [Chthoniobacterales bacterium]", "diamond", "576", "89", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA876641", "p1": "PVC group", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA876641", "label": "PRJNA876641", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA876641&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 464.81936399868573}