{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA874604\" and tax_kingdom = \"Methanobacteriati\"", "rows": [[2127510, "PRJNA874604_P_NODE_59362_length_267_cov_1.407216_g59010_i0", "PRJNA874604", "59362", "267", "1.407216", "3.75726672", "Haladaptatus halobius", "2884875", "Archaea", "Archaea", "195", "3.84e-45", "", "NTclustered", "gi|2124335437|gb|CP085336.1|", "2884875", "g59010", "i0", "80.075", "8.8689138576779", "266", "49", "99", "4", "4", "267", "751820", "752083", "Haladaptatus halobius strain PSR5 chromosome 2, complete sequence", "blastn", "2368", "195", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haladaptataceae", "Haladaptatus", "Haladaptatus halobius"], [13991989, "PRJNA874604_P_NODE_62711_length_261_cov_1.569149_g62359_i0", "PRJNA874604", "62711", "261", "1.569149", "4.09547889", "Methanocaldococcus", "196118", "Archaea", "Archaea", "60.2", "1.42e-4", "", "NTclustered", "gi|103488854|gb|DQ516907.1|", "2190", "g62359", "i0", "100", "0.245210727969349", "32", "0", "12", "0", "230", "261", "69", "38", "Methanocaldococcus jannaschii spike-in control MJ-8000-191 genomic sequence", "blastn", "64", "60.2", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanocaldococcaceae", "Methanocaldococcus", "Methanocaldococcus jannaschii"], [26706757, "PRJNA874604_P_NODE_80521_length_247_cov_0.885057_g80169_i0", "PRJNA874604", "80521", "247", "0.885057", "2.18609079", "Methanosarcinales archaeon", "2250255", "Archaea", "Archaea", "41.2", "0.0276", "", "NR", "MCK5109419.1", "2250255", "g80169", "i0", "36.4", "0.534412955465587", "44", "28", "53.4", "0", "66", "197", "17", "60", "MCK5109419.1 hypothetical protein [Methanosarcinales archaeon]", "diamond", "132", "41.2", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, null, "Methanosarcinales archaeon"], [27505873, "PRJNA874604_P_NODE_81083_length_247_cov_0.885057_g80731_i0", "PRJNA874604", "81083", "247", "0.885057", "2.18609079", "root", "1", "Root_unresolved", "Root_unresolved", "42.7", "0.0363", "", "NR", "MBR3156603.1", "66852", "g80731", "i0", "36", "2.36842105263158", "75", "38", "91.1", "2", "233", "9", "156", "220", "MBR3156603.1 hypothetical protein [Methanobrevibacter sp.]", "diamond", "585", "43.1", "0.990719257540603", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [28129194, "PRJNA874604_P_NODE_75145_length_249_cov_0.875000_g74793_i0", "PRJNA874604", "75145", "249", "0.875", "2.17875", "Methanospirillum sp.", "45200", "Archaea", "Archaea", "45.1", "0.00522", "", "NR", "HWQ67247.1", "45200", "g74793", "i0", "50.8", "0.710843373493976", "59", "20", "68.7", "2", "242", "72", "184", "235", "HWQ67247.1 hypothetical protein [Methanospirillum sp.]", "diamond", "177", "45.1", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanospirillaceae", "Methanospirillum", "Methanospirillum sp."], [28191983, "PRJNA874604_P_NODE_55946_length_273_cov_1.540000_g55594_i0", "PRJNA874604", "55946", "273", "1.54", "4.2042", "Natrinema ejinorense", "373386", "Archaea", "Archaea", "43.1", "0.039", "", "NR", "WP_097379368.1", "373386", "g55594", "i0", "38.3", "0.659340659340659", "60", "37", "65.9", "0", "226", "47", "93", "152", "WP_097379368.1 amino acid permease [Natrinema ejinorense]", "diamond", "180", "43.1", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natrialbaceae", "Natrinema", "Natrinema ejinorense"], [29612705, "PRJNA874604_P_NODE_60150_length_266_cov_1.020725_g59798_i0", "PRJNA874604", "60150", "266", "1.020725", "2.7151285", "Halovenus sp.", "1954478", "Archaea", "Archaea", "72.4", "1.68e-12", "", "NR", "MFT4944476.1", "1954478", "g59798", "i0", "41.9", "1.66917293233083", "74", "42", "82.3", "1", "259", "41", "109", "182", "MFT4944476.1 diacylglycerol O-acyltransferase [Halovenus sp.]", "diamond", "444", "72.4", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloarculaceae", "Halovenus", "Halovenus sp."], [30497639, "PRJNA874604_P_NODE_48453_length_287_cov_1.439252_g48101_i0", "PRJNA874604", "48453", "287", "1.439252", "4.13065324", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "58.2", "1.04e-7", "", "NR", "MBR95856.1", "2026739", "g48101", "i0", "44.6", "1.60975609756098", "74", "36", "76.3", "3", "274", "56", "2", "71", "MBR95856.1 thiopurine S-methyltransferase [Methanobacteriota archaeon]", "diamond", "462", "58.2", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [30592272, "PRJNA874604_P_NODE_97133_length_242_cov_0.911243_g96781_i0", "PRJNA874604", "97133", "242", "0.911243", "2.20520806", "Methanosarcina sp.", "2213", "Archaea", "Archaea", "49.3", "1.82e-5", "", "NR", "HET8687115.1", "2213", "g96781", "i0", "42.5", "0.495867768595041", "40", "21", "49.6", "1", "239", "120", "32", "69", "HET8687115.1 hypothetical protein [Methanosarcina sp.]", "diamond", "120", "49.3", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Methanosarcinaceae", "Methanosarcina", "Methanosarcina sp."], [30623773, "PRJNA874604_P_NODE_81173_length_247_cov_0.885057_g80821_i0", "PRJNA874604", "81173", "247", "0.885057", "2.18609079", "Haloplanus sp. XH21", "2934938", "Archaea", "Archaea", "41.2", "0.0339", "", "NR", "WP_345779736.1", "2934938", "g80821", "i0", "41.3", "0.910931174089069", "75", "40", "87.4", "2", "216", "1", "2", "75", "WP_345779736.1 heavy-metal-associated domain-containing protein [Haloplanus sp. XH21]", "diamond", "225", "41.2", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", "Haloplanus", "Haloplanus halobius"], [30916544, "PRJNA874604_P_NODE_88854_length_245_cov_0.860465_g88502_i0", "PRJNA874604", "88854", "245", "0.860465", "2.10813925", "Methanocaldococcaceae", "196117", "Archaea", "Archaea", "43.1", "0.0267", "", "NR", "WP_013799082.1", "2189", "g88502", "i0", "30.7", "1.62857142857143", "75", "51", "90.6", "1", "245", "24", "238", "312", "WP_013799082.1 mechanosensitive ion channel family protein [Methanotorris igneus]", "diamond", "399", "43.1", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanocaldococcaceae", "Methanotorris", "Methanotorris igneus"], [31192287, "PRJNA874604_P_NODE_87035_length_245_cov_0.895349_g86683_i0", "PRJNA874604", "87035", "245", "0.895349", "2.19360505", "Methanoregulaceae archaeon", "2485498", "Archaea", "Archaea", "65.1", "5.08e-10", "", "NR", "HNJ81026.1", "2485498", "g86683", "i0", "45.8", "0.722448979591837", "59", "30", "72.2", "1", "69", "245", "603", "659", "HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon]", "diamond", "177", "65.1", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanoregulaceae", null, "Methanoregulaceae archaeon"], [31414100, "PRJNA874604_P_NODE_79636_length_248_cov_0.880000_g79284_i0", "PRJNA874604", "79636", "248", "0.88", "2.1824", "Methanoregula sp.", "2052170", "Archaea", "Archaea", "50.1", "1.06e-4", "", "NR", "WP_373007287.1", "2052170", "g79284", "i0", "43.3", "0.810483870967742", "67", "28", "78.6", "3", "46", "240", "126", "184", "WP_373007287.1 TIGR03768 family metallophosphoesterase [Methanoregula sp.]", "diamond", "201", "50.1", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanoregulaceae", "Methanoregula", "Methanoregula sp."], [32616028, "PRJNA874604_P_NODE_87800_length_245_cov_0.895349_g87448_i0", "PRJNA874604", "87800", "245", "0.895349", "2.19360505", "Haloarcula saliterrae", "2950534", "Archaea", "Archaea", "64.3", "9.32e-10", "", "NR", "WP_310921739.1", "2950534", "g87448", "i0", "43.2", "0.906122448979592", "74", "40", "90.6", "1", "229", "8", "120", "191", "WP_310921739.1 type I restriction-modification system subunit M [Haloarcula saliterrae]", "diamond", "222", "64.3", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloarculaceae", "Haloarcula", "Haloarcula saliterrae"]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA874604", "p1": "Methanobacteriati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati", "results": [{"value": "PRJNA874604", "label": "PRJNA874604", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati", "results": [{"value": "diamond", "label": "diamond", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati", "results": [{"value": "Archaea", "label": "Archaea", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati", "results": [{"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati&tax_clade=Stenosarchaea+group", "selected": false}, {"value": "Methanomada group", "label": "Methanomada group", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati&tax_clade=Methanomada+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_kingdom=Methanobacteriati&tax_phylum=Methanobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 170.82181500154547}