{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA874604\", tax_clade = \"FCB group\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[2127587, "PRJNA874604_P_NODE_63062_length_260_cov_2.192513_g62710_i0", "PRJNA874604", "63062", "260", "2.192513", "5.7005338", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "130", "5.43e-33", "", "NR", "MEJ7812963.1", "2026741", "g62710", "i0", "71.4", "0.969230769230769", "84", "24", "96.9", "0", "9", "260", "353", "436", "MEJ7812963.1 DUF885 domain-containing protein [Gemmatimonadaceae bacterium]", "diamond", "252", "130", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [7230683, "PRJNA874604_P_NODE_73846_length_250_cov_0.870056_g73494_i0", "PRJNA874604", "73846", "250", "0.870056", "2.17514", "Roseisolibacter sp. H3M3-2", "3031323", "Bacteria", "Bacteria", "123", "3.33e-31", "", "NR", "WP_275833286.1", "3031323", "g73494", "i0", "74.7", "0.996", "83", "21", "99.6", "0", "250", "2", "219", "301", "WP_275833286.1 M16 family metallopeptidase [Roseisolibacter sp. H3M3-2]", "diamond", "249", "123", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Roseisolibacter", "Roseisolibacter sp. H3M3-2"], [13605133, "PRJNA874604_P_NODE_21131_length_395_cov_0.947205_g20779_i0", "PRJNA874604", "21131", "395", "0.947205", "3.74145975", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "91.6", "8.01e-14", "", "NTclustered", "gi|2107953857|gb|CP070792.1|", "2026742", "g20779", "i0", "91.176", "1.91898734177215", "68", "4", "17", "2", "301", "366", "902044", "902111", "MAG: Gemmatimonadetes bacterium isolate bin1440 chromosome", "blastn", "758", "91.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [13606646, "PRJNA874604_P_NODE_99471_length_241_cov_0.916667_g99119_i0", "PRJNA874604", "99471", "241", "0.916667", "2.20916747", "Pseudogemmatithrix spongiicola", "3062599", "Bacteria", "Bacteria", "172", "1.6e-38", "", "NTclustered", "gi|2557479348|gb|CP130613.1|", "3062599", "g99119", "i0", "81.166", "2.74688796680498", "223", "35", "90", "6", "1", "218", "1441321", "1441101", "Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome", "blastn", "662", "172", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Pseudogemmatithrix", "Pseudogemmatithrix spongiicola"], [17430150, "PRJNA874604_P_NODE_47434_length_289_cov_1.398148_g47082_i0", "PRJNA874604", "47434", "289", "1.398148", "4.04064772", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "281", "3.13e-71", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g47082", "i0", "84.965", "106.557093425606", "286", "33", "97", "8", "1", "280", "3042327", "3042608", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "30795", "281", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [22915422, "PRJNA874604_P_NODE_12958_length_483_cov_1.314634_g12606_i0", "PRJNA874604", "12958", "483", "1.314634", "6.34968222", "Longimicrobium sp.", "2029185", "Bacteria", "Bacteria", "233", "4.31e-75", "", "NR", "HEX6750180.1", "2029185", "g12606", "i0", "72.4", "1.90062111801242", "152", "42", "94.4", "0", "458", "3", "1", "152", "HEX6750180.1 GNAT family N-acetyltransferase [Longimicrobium sp.]", "diamond", "918", "233", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", "Longimicrobium", "Longimicrobium sp."], [27971161, "PRJNA874604_P_NODE_100165_length_241_cov_0.916667_g99813_i0", "PRJNA874604", "100165", "241", "0.916667", "2.20916747", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "97.4", "2e-21", "", "NR", "HEX3926874.1", "2448054", "g99813", "i0", "60.3", "4.50622406639004", "73", "29", "90.9", "0", "3", "221", "187", "259", "HEX3926874.1 M20/M25/M40 family metallo-hydrolase [Gemmatimonadales bacterium]", "diamond", "1086", "97.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [28413330, "PRJNA874604_P_NODE_53266_length_278_cov_1.370732_g52914_i0", "PRJNA874604", "53266", "278", "1.370732", "3.81063496", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "42.4", "0.048", "", "NR", "MBA3671164.1", "2026741", "g52914", "i0", "30.6", "0.776978417266187", "72", "45", "72.3", "1", "241", "41", "59", "130", "MBA3671164.1 hypothetical protein [Gemmatimonadaceae bacterium]", "diamond", "216", "42.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [29084479, "PRJNA874604_P_NODE_90168_length_244_cov_0.900585_g89816_i0", "PRJNA874604", "90168", "244", "0.900585", "2.1974274", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "135", "3.8e-36", "", "NR", "HYD54562.1", "2026741", "g89816", "i0", "76.3", "7.79508196721311", "80", "19", "98.4", "0", "240", "1", "154", "233", "HYD54562.1 glycoside hydrolase family 172 protein [Gemmatimonadaceae bacterium]", "diamond", "1902", "135", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [29210830, "PRJNA874604_P_NODE_75369_length_249_cov_0.875000_g75017_i0", "PRJNA874604", "75369", "249", "0.875", "2.17875", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "62.4", "2.89e-9", "", "NR", "MBP9106683.1", "2026741", "g75017", "i0", "43.4", "1.92771084337349", "83", "44", "96.4", "3", "240", "1", "36", "118", "MBP9106683.1 hypothetical protein [Gemmatimonadaceae bacterium]", "diamond", "480", "62.8", "0.993630573248408", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [29392141, "PRJNA874604_P_NODE_100929_length_239_cov_2.500000_g100577_i0", "PRJNA874604", "100929", "239", "2.5", "5.975", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "89.7", "5.57e-19", "", "NR", "MEO7103829.1", "2026741", "g100577", "i0", "55.8", "0.96652719665272", "77", "33", "96.7", "1", "231", "1", "129", "204", "MEO7103829.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Gemmatimonadaceae bacterium]", "diamond", "231", "89.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [29802454, "PRJNA874604_P_NODE_79771_length_248_cov_0.880000_g79419_i0", "PRJNA874604", "79771", "248", "0.88", "2.1824", "Longimicrobiaceae bacterium", "3047548", "Bacteria", "Bacteria", "79.3", "1.7e-15", "", "NR", "HYJ80700.1", "3047548", "g79419", "i0", "55.2", "1.31854838709677", "58", "26", "70.2", "0", "246", "73", "219", "276", "HYJ80700.1 M15 family metallopeptidase [Longimicrobiaceae bacterium]", "diamond", "327", "79.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", "Longimicrobiaceae", null, "Longimicrobiaceae bacterium"], [30466272, "PRJNA874604_P_NODE_54673_length_275_cov_2.287129_g54321_i0", "PRJNA874604", "54673", "275", "2.287129", "6.28960475", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "55.5", "1.84e-6", "", "NR", "HET7584050.1", "2026741", "g54321", "i0", "39.3", "1.74545454545455", "89", "53", "97.1", "1", "1", "267", "115", "202", "HET7584050.1 penicillin acylase family protein [Gemmatimonadaceae bacterium]", "diamond", "480", "55.5", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [31255899, "PRJNA874604_P_NODE_67235_length_253_cov_1.455556_g66883_i0", "PRJNA874604", "67235", "253", "1.455556", "3.68255668", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "98.2", "1.25e-21", "", "NR", "NNE08319.1", "2026742", "g66883", "i0", "55.1", "0.924901185770751", "78", "35", "92.5", "0", "15", "248", "205", "282", "NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium]", "diamond", "234", "98.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [32394881, "PRJNA874604_P_NODE_80519_length_247_cov_0.885057_g80167_i0", "PRJNA874604", "80519", "247", "0.885057", "2.18609079", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "54.3", "2.33e-6", "", "NR", "HEX6694358.1", "2910168", "g80167", "i0", "45.2", "1.02024291497976", "84", "34", "96", "3", "237", "1", "71", "147", "HEX6694358.1 4'-phosphopantetheinyl transferase superfamily protein [Longimicrobiales bacterium]", "diamond", "252", "54.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [32710396, "PRJNA874604_P_NODE_90740_length_244_cov_0.900585_g90388_i0", "PRJNA874604", "90740", "244", "0.900585", "2.1974274", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "128", "3.25e-36", "", "NR", "HEY2848380.1", "2026741", "g90388", "i0", "72.2", "0.971311475409836", "79", "22", "97.1", "0", "8", "244", "6", "84", "HEY2848380.1 hypothetical protein [Gemmatimonadaceae bacterium]", "diamond", "237", "128", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [32836309, "PRJNA874604_P_NODE_58200_length_269_cov_1.510204_g57848_i0", "PRJNA874604", "58200", "269", "1.510204", "4.06244876", "Gemmatimonadetes bacterium T265", "2839016", "Bacteria", "Bacteria", "166", "4.67e-48", "", "NR", "GJG86879.1", "2839016", "g57848", "i0", "91", "0.992565055762082", "89", "8", "99.3", "0", "268", "2", "45", "133", "GJG86879.1 aerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase [Gemmatimonadetes bacterium T265]", "diamond", "267", "166", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadetes bacterium T265"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA874604", "p1": "FCB group", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA874604", "label": "PRJNA874604", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA874604&tax_clade=FCB+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 397.96285200282}