{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA859990\", tax_phylum = \"Bdellovibrionota\" and tax_superkingdom = \"Bacteria\"", "rows": [[5949224, "PRJNA859990_S_NODE_19865_length_246_cov_0.890173_g19604_i0", "PRJNA859990", "19865", "246", "0.890173", "2.18982558", "Peredibacter starrii", "28202", "Bacteria", "Bacteria", "353", "5.44e-93", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g19604", "i0", "92.653", "3.99186991869919", "245", "18", "99", "0", "2", "246", "512231", "512475", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "982", "353", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [9774077, "PRJNA859990_S_NODE_9128_length_334_cov_1.394636_g8867_i0", "PRJNA859990", "9128", "334", "1.394636", "4.65808424", "Peredibacter starrii", "28202", "Bacteria", "Bacteria", "595", "1.1599999999999998e-165", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g8867", "i0", "98.802", "204.245508982036", "334", "4", "100", "0", "1", "334", "513055", "512722", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "68218", "595", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [12325154, "PRJNA859990_S_NODE_5750_length_410_cov_1.317507_g5489_i0", "PRJNA859990", "5750", "410", "1.317507", "5.4017787", "Peredibacter starrii", "28202", "Bacteria", "Bacteria", "721", "0", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g5489", "i0", "98.301", "115.956097560976", "412", "5", "100", "1", "1", "410", "511821", "512232", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "47542", "721", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [14873842, "PRJNA859990_S_NODE_16752_length_257_cov_1.434783_g16491_i0", "PRJNA859990", "16752", "257", "1.434783", "3.68739231", "Peredibacter starrii", "28202", "Bacteria", "Bacteria", "414", "2.59e-111", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g16491", "i0", "96.063", "91.9455252918288", "254", "10", "99", "0", "4", "257", "511302", "511049", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "23630", "414", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [14873893, "PRJNA859990_S_NODE_21492_length_242_cov_1.621302_g21231_i0", "PRJNA859990", "21492", "242", "1.621302", "3.92355084", "Bdellovibrio sp. HAGR004", "3113895", "Bacteria", "Bacteria", "243", "1.2100000000000004e-59", "", "NTclustered", "gi|2663432256|dbj|AP029176.1|", "3113895", "g21231", "i0", "88.5", "2.73140495867769", "200", "23", "83", "0", "3", "202", "2579000", "2579199", "Bdellovibrio sp. HAGR004 DNA, complete genome", "blastn", "661", "243", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. HAGR004"], [20362586, "PRJNA859990_S_NODE_6016_length_401_cov_1.945122_g5755_i0", "PRJNA859990", "6016", "401", "1.945122", "7.79993922", "Peredibacter", "263370", "Bacteria", "Bacteria", "667", "0", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g5755", "i0", "96.758", "219.476309226933", "401", "12", "100", "1", "1", "401", "511581", "511980", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "88010", "667", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [27149495, "PRJNA859990_S_NODE_18242_length_250_cov_0.870056_g17981_i0", "PRJNA859990", "18242", "250", "0.870056", "2.17514", "Bacteriovoracaceae bacterium", "2081706", "Bacteria", "Bacteria", "145", "4.55e-39", "", "NR", "MCM2350652.1", "2081706", "g17981", "i0", "79.5", "0.996", "83", "17", "99.6", "0", "2", "250", "457", "539", "MCM2350652.1 hypothetical protein [Bacteriovoracaceae bacterium]", "diamond", "249", "145", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", null, "Bacteriovoracaceae bacterium"], [27907656, "PRJNA859990_S_NODE_19525_length_247_cov_0.879310_g19264_i0", "PRJNA859990", "19525", "247", "0.87931", "2.1718957", "Bacteriovoracaceae bacterium", "2081706", "Bacteria", "Bacteria", "62", "6.18e-9", "", "NR", "MBY0515591.1", "2081706", "g19264", "i0", "37.3", "1.0080971659919", "83", "50", "98.4", "2", "3", "245", "546", "628", "MBY0515591.1 hypothetical protein [Bacteriovoracaceae bacterium]", "diamond", "249", "62", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", null, "Bacteriovoracaceae bacterium"], [28034387, "PRJNA859990_S_NODE_20525_length_244_cov_1.543860_g20264_i0", "PRJNA859990", "20525", "244", "1.54386", "3.7670184", "Bdellovibrio sp. KM", "28201", "Bacteria", "Bacteria", "74.7", "2.11e-13", "", "NR", "WP_181604689.1", "2748865", "g20264", "i0", "97.1", "0.418032786885246", "34", "1", "41.8", "0", "244", "143", "950", "983", "WP_181604689.1 L-glutamate gamma-semialdehyde dehydrogenase [Bdellovibrio sp. KM01]", "diamond", "102", "74.7", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. KM01"], [30244819, "PRJNA859990_S_NODE_21692_length_242_cov_0.911243_g21431_i0", "PRJNA859990", "21692", "242", "0.911243", "2.20520806", "Pseudobdellovibrio sp.", "2862747", "Bacteria", "Bacteria", "62.8", "3.15e-9", "", "NR", "MFN3453399.1", "2862747", "g21431", "i0", "42.3", "0.966942148760331", "78", "45", "96.7", "0", "242", "9", "444", "521", "MFN3453399.1 aromatic amino acid hydroxylase [Pseudobdellovibrio sp.]", "diamond", "234", "62.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Pseudobdellovibrio", "Pseudobdellovibrio sp."], [30434590, "PRJNA859990_S_NODE_18213_length_250_cov_0.915254_g17952_i0", "PRJNA859990", "18213", "250", "0.915254", "2.288135", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "87", "3e-18", "", "NR", "HVK60334.1", "2053517", "g17952", "i0", "64.2", "0.804", "67", "24", "80.4", "0", "1", "201", "56", "122", "HVK60334.1 hypothetical protein [Bdellovibrionales bacterium]", "diamond", "201", "87", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [31445566, "PRJNA859990_S_NODE_18276_length_250_cov_0.870056_g18015_i0", "PRJNA859990", "18276", "250", "0.870056", "2.17514", "Silvanigrellaceae bacterium", "2654442", "Bacteria", "Bacteria", "64.7", "7.05e-10", "", "NR", "MBX9837929.1", "2654442", "g18015", "i0", "50.8", "0.732", "61", "29", "73.2", "1", "248", "66", "96", "155", "MBX9837929.1 hypothetical protein [Silvanigrellaceae bacterium]", "diamond", "183", "64.7", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Silvanigrellales", "Silvanigrellaceae", null, "Silvanigrellaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA859990", "p1": "Bdellovibrionota", "p2": "Bacteria"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "results": [{"value": "PRJNA859990", "label": "PRJNA859990", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "results": [{"value": "blastn", "label": "blastn", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "results": [{"value": "Bdellovibrionota", "label": "Bdellovibrionota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA859990&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 526.8335229484364}