{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA853194\", tax_phylum = \"Campylobacterota\" and tax_superkingdom = \"Bacteria\"", "rows": [[840991, "PRJNA853194_S_NODE_73201_length_256_cov_8.923497_g72110_i0", "PRJNA853194", "73201", "256", "8.923497", "22.84415232", "Malaciobacter marinus", "505249", "Bacteria", "Bacteria", "52.8", "0.023", "", "NTclustered", "gi|1474785413|gb|CP032101.1|", "505249", "g72110", "i0", "100", "0.109375", "28", "0", "11", "0", "130", "157", "1771291", "1771318", "Malaciobacter marinus strain JCM 15502 chromosome, complete genome", "blastn", "28", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Malaciobacter", "Malaciobacter marinus"], [10162960, "PRJNA853194_S_NODE_15828_length_492_cov_2.749403_g14740_i0", "PRJNA853194", "15828", "492", "2.749403", "13.52706276", "Campylobacter", "194", "Bacteria", "Bacteria", "54.7", "0.013", "", "NTclustered", "gi|1918098848|gb|CP027634.1|", "195", "g14740", "i0", "94.444", "0.219512195121951", "36", "1", "7", "1", "332", "367", "1428634", "1428600", "Campylobacter coli strain meC0281 chromosome, complete genome", "blastn", "108", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter coli"], [14867887, "PRJNA853194_S_NODE_19192_length_455_cov_1.738220_g18102_i0", "PRJNA853194", "19192", "455", "1.73822", "7.908901", "Campylobacter concisus", "199", "Bacteria", "Bacteria", "52.8", "0.044", "", "NTclustered", "gi|1938724023|gb|CP060707.1|", "199", "g18102", "i0", "100", "0.145054945054945", "28", "0", "6", "0", "198", "225", "1346830", "1346857", "Campylobacter concisus strain P1CDO2 chromosome, complete genome", "blastn", "66", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter concisus"], [17418943, "PRJNA853194_S_NODE_59074_length_285_cov_1.080189_g57983_i0", "PRJNA853194", "59074", "285", "1.080189", "3.07853865", "Malaciobacter mytili", "603050", "Bacteria", "Bacteria", "54.7", "0.007", "", "NTclustered", "gi|1435908220|gb|CP031219.1|", "1032238", "g57983", "i0", "100", "0.101754385964912", "29", "0", "10", "0", "80", "108", "2394386", "2394358", "Malaciobacter mytili LMG 24559 chromosome, complete genome", "blastn", "29", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Malaciobacter", "Malaciobacter mytili"], [21242243, "PRJNA853194_S_NODE_32497_length_369_cov_2.057432_g31406_i0", "PRJNA853194", "32497", "369", "2.057432", "7.59192408", "Campylobacter armoricus", "2505970", "Bacteria", "Bacteria", "54.7", "0.01", "", "NTclustered", "gi|1861371805|gb|CP053825.1|", "2505970", "g31406", "i0", "90.476", "0.227642276422764", "42", "2", "11", "1", "34", "73", "1309547", "1309588", "Campylobacter armoricus strain CCUG 73571 chromosome, complete genome", "blastn", "84", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter armoricus"], [27252787, "PRJNA853194_S_NODE_63_length_2968_cov_22.254231_g39_i0", "PRJNA853194", "63", "2968", "22.254231", "660.50557608", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "52.4", "0.0137", "", "NR", "WP_105915931.1", "28198", "g39", "i0", "22.9", "0.67722371967655", "402", "269", "38.7", "13", "453", "1601", "234", "613", "WP_105915931.1 hypothetical protein [Aliarcobacter cryaerophilus]", "diamond", "2010", "52.8", "0.992424242424242", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Aliarcobacter", "Aliarcobacter cryaerophilus"]], "truncated": false, "filtered_table_rows_count": 6, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA853194", "p1": "Campylobacterota", "p2": "Bacteria"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "PRJNA853194", "label": "PRJNA853194", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA853194&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 294.0129250055179}