{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA849822\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Spirochaetota\"", "rows": [[3389307, "PRJNA849822_P_NODE_25823_length_286_cov_1.464789_g25649_i0", "PRJNA849822", "25823", "286", "1.464789", "4.18929654", "Borreliella tanukii", "56146", "Bacteria", "Bacteria", "52.8", "0.026", "", "NTclustered", "gi|2918225508|gb|CP179582.1|", "56146", "g25649", "i0", "100", "0.0979020979020979", "28", "0", "10", "0", "252", "279", "10022", "9995", "Borreliella tanukii strain Koshiki4E plasmid lp28-8, complete sequence", "blastn", "28", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Borreliaceae", "Borreliella", "Borreliella tanukii"], [17416880, "PRJNA849822_P_NODE_32994_length_254_cov_1.629834_g32820_i0", "PRJNA849822", "32994", "254", "1.629834", "4.13977836", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "120", "1.35e-30", "", "NR", "MCU0824911.1", "178", "g32820", "i0", "61.9", "13.0393700787402", "84", "31", "98", "1", "5", "253", "32", "115", "MCU0824911.1 pirin family protein [Leptospira sp.]", "diamond", "3312", "121", "0.991735537190083", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira sp."], [19085016, "PRJNA849822_P_NODE_22375_length_306_cov_2.124464_g22201_i0", "PRJNA849822", "22375", "306", "2.124464", "6.50085984", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "191", "1.1299999999999995e-55", "", "NR", "OHD07488.1", "1802173", "g22201", "i0", "85.1", "7.92156862745098", "101", "15", "99", "0", "2", "304", "251", "351", "OHD07488.1 MAG: phosphoenolpyruvate carboxykinase [Spirochaetes bacterium GWB1_27_13]", "diamond", "2424", "192", "0.994791666666667", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetes bacterium GWB1_27_13"], [23790932, "PRJNA849822_P_NODE_35959_length_250_cov_0.881356_g35785_i0", "PRJNA849822", "35959", "250", "0.881356", "2.20339", "Leptospira sp. severe_002", "2838237", "Bacteria", "Bacteria", "329", "9.34e-86", "", "NTclustered", "gi|2120242214|gb|CP075692.1|", "2838237", "g35785", "i0", "90.4", "82.972", "250", "24", "100", "0", "1", "250", "83985", "84234", "Leptospira sp. severe_002 chromosome 1", "blastn", "20743", "329", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira sp. severe_002"], [27307991, "PRJNA849822_P_NODE_35603_length_251_cov_0.876404_g35429_i0", "PRJNA849822", "35603", "251", "0.876404", "2.19977404", "Rectinemataceae bacterium", "3064674", "Bacteria", "Bacteria", "58.9", "2.1e-8", "", "NR", "HEY9053748.1", "3064674", "g35429", "i0", "36.6", "1.69721115537849", "71", "44", "84.9", "1", "250", "38", "99", "168", "HEY9053748.1 phosphoribosyltransferase [Rectinemataceae bacterium]", "diamond", "426", "58.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Rectinemataceae", null, "Rectinemataceae bacterium"], [27750126, "PRJNA849822_P_NODE_16444_length_358_cov_1.094737_g16270_i0", "PRJNA849822", "16444", "358", "1.094737", "3.91915846", "Treponema sp.", "166", "Bacteria", "Bacteria", "159", "1.28e-43", "", "NR", "MCL2831655.1", "166", "g16270", "i0", "61.3", "12.9469273743017", "119", "46", "99.7", "0", "358", "2", "351", "469", "MCL2831655.1 hydroxylamine reductase [Treponema sp.]", "diamond", "4635", "159", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [27876187, "PRJNA849822_P_NODE_6065_length_632_cov_1.991055_g5896_i0", "PRJNA849822", "6065", "632", "1.991055", "12.5834676", "Spirochaetales bacterium", "2026792", "Bacteria", "Bacteria", "68.9", "1.35e-9", "", "NR", "MBN2532363.1", "2026792", "g5896", "i0", "29", "0.835443037974684", "176", "112", "83.5", "2", "93", "620", "251", "413", "MBN2532363.1 cadherin-like beta sandwich domain-containing protein [Spirochaetales bacterium]", "diamond", "528", "68.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [28286450, "PRJNA849822_P_NODE_27586_length_278_cov_1.141463_g27412_i0", "PRJNA849822", "27586", "278", "1.141463", "3.17326714", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "58.2", "2.09e-7", "", "NR", "MCX7039213.1", "2202144", "g27412", "i0", "34.1", "0.982014388489209", "91", "55", "92.8", "1", "261", "4", "201", "291", "MCX7039213.1 hypothetical protein [Spirochaetota bacterium]", "diamond", "273", "58.2", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [28768456, "PRJNA849822_P_NODE_16927_length_353_cov_1.000000_g16753_i0", "PRJNA849822", "16927", "353", "1", "3.53", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "146", "1.39e-38", "", "NR", "OHD76963.1", "1802198", "g16753", "i0", "61.2", "44.2776203966006", "116", "45", "98.6", "0", "2", "349", "177", "292", "OHD76963.1 MAG: diphosphate--fructose-6-phosphate 1-phosphotransferase, partial [Spirochaetes bacterium RIFOXYC1_FULL_54_7]", "diamond", "15630", "146", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetes bacterium RIFOXYC1_FULL_54_7"], [28791700, "PRJNA849822_P_NODE_40447_length_245_cov_0.906977_g40273_i0", "PRJNA849822", "40447", "245", "0.906977", "2.22209365", "Spirochaetales bacterium", "2026792", "Bacteria", "Bacteria", "63.9", "1.27e-9", "", "NR", "MEI8095998.1", "2026792", "g40273", "i0", "48.3", "2.21632653061224", "60", "30", "73.5", "1", "228", "49", "310", "368", "MEI8095998.1 glycoside hydrolase [Spirochaetales bacterium]", "diamond", "543", "63.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [29107721, "PRJNA849822_P_NODE_42828_length_242_cov_1.254438_g42654_i0", "PRJNA849822", "42828", "242", "1.254438", "3.03573996", "Treponema sp.", "166", "Bacteria", "Bacteria", "46.2", "0.00196", "", "NR", "MDR2632347.1", "166", "g42654", "i0", "32.9", "1.79752066115702", "76", "47", "94.2", "2", "234", "7", "168", "239", "MDR2632347.1 CAP domain-containing protein [Treponema sp.]", "diamond", "435", "46.2", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [29454534, "PRJNA849822_P_NODE_36250_length_250_cov_0.881356_g36076_i0", "PRJNA849822", "36250", "250", "0.881356", "2.20339", "Spirochaetaceae bacterium", "1898206", "Bacteria", "Bacteria", "75.5", "1.14e-13", "", "NR", "MDC7123931.1", "1898206", "g36076", "i0", "53.2", "0.948", "79", "35", "94.8", "1", "237", "1", "229", "305", "MDC7123931.1 hypothetical protein [Spirochaetaceae bacterium]", "diamond", "237", "75.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Spirochaetaceae", null, "Spirochaetaceae bacterium"], [30023531, "PRJNA849822_P_NODE_18091_length_340_cov_1.951311_g17917_i0", "PRJNA849822", "18091", "340", "1.951311", "6.6344574", "Spirochaetes bacterium GWB1_27_13", "1802173", "Bacteria", "Bacteria", "48.5", "0.00108", "", "NR", "OHD10121.1", "1802173", "g17917", "i0", "35.9", "0.811764705882353", "92", "51", "75", "3", "280", "26", "439", "529", "OHD10121.1 MAG: hypothetical protein A2Z98_01325 [Spirochaetes bacterium GWB1_27_13]", "diamond", "276", "48.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetes bacterium GWB1_27_13"], [30212778, "PRJNA849822_P_NODE_35912_length_250_cov_0.881356_g35738_i0", "PRJNA849822", "35912", "250", "0.881356", "2.20339", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "50.1", "9.97e-5", "", "NR", "MBU1076431.1", "2202144", "g35738", "i0", "36.8", "1.428", "68", "43", "81.6", "0", "42", "245", "1", "68", "MBU1076431.1 hypothetical protein [Spirochaetota bacterium]", "diamond", "357", "50.1", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [30308228, "PRJNA849822_P_NODE_8652_length_514_cov_1.038549_g8480_i0", "PRJNA849822", "8652", "514", "1.038549", "5.33814186", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "80.1", "6.26e-15", "", "NR", "HOJ64279.1", "2202144", "g8480", "i0", "42.1", "0.624513618677043", "107", "58", "60.1", "1", "27", "335", "112", "218", "HOJ64279.1 lysoplasmalogenase [Spirochaetota bacterium]", "diamond", "321", "80.1", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [30371327, "PRJNA849822_P_NODE_21732_length_311_cov_1.151261_g21558_i0", "PRJNA849822", "21732", "311", "1.151261", "3.58042171", "Spirochaetaceae bacterium", "1898206", "Bacteria", "Bacteria", "52", "4.72e-5", "", "NR", "MCD6396637.1", "1898206", "g21558", "i0", "48.7", "1.52411575562701", "78", "36", "72.3", "3", "22", "246", "401", "477", "MCD6396637.1 cadherin-like beta sandwich domain-containing protein [Spirochaetaceae bacterium]", "diamond", "474", "52", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Spirochaetaceae", null, "Spirochaetaceae bacterium"], [30442471, "PRJNA849822_P_NODE_29713_length_268_cov_1.379487_g29539_i0", "PRJNA849822", "29713", "268", "1.379487", "3.69702516", "root", "1", "Root_unresolved", "Root_unresolved", "52.8", "4.6e-6", "", "NR", "MBQ7619200.1", "166", "g29539", "i0", "44.1", "2.08208955223881", "59", "33", "66", "0", "263", "87", "91", "149", "MBQ7619200.1 ankyrin repeat domain-containing protein [Treponema sp.]", "diamond", "558", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [30528770, "PRJNA849822_P_NODE_17893_length_342_cov_2.122677_g17719_i0", "PRJNA849822", "17893", "342", "2.122677", "7.25955534", "Oceanispirochaeta sp.", "2035350", "Bacteria", "Bacteria", "63.5", "9.21e-10", "", "NR", "WP_298009014.1", "2035350", "g17719", "i0", "39.1", "1.52631578947368", "87", "47", "76.3", "2", "261", "1", "29", "109", "WP_298009014.1 DOMON domain-containing protein [Oceanispirochaeta sp.]", "diamond", "522", "63.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Spirochaetaceae", "Oceanispirochaeta", "Oceanispirochaeta sp."], [31540388, "PRJNA849822_P_NODE_31016_length_262_cov_2.063492_g30842_i0", "PRJNA849822", "31016", "262", "2.063492", "5.40634904", "Leptospira sp. 'Mane'", "3387407", "Bacteria", "Bacteria", "51.6", "3.26e-5", "", "NR", "WP_411823535.1", "3387407", "g30842", "i0", "41.8", "1.22519083969466", "55", "32", "63", "0", "176", "12", "29", "83", "WP_411823535.1 SMP-30/gluconolactonase/LRE family protein [Leptospira sp. 'Mane']", "diamond", "321", "51.6", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira sp. 'Mane'"], [31738143, "PRJNA849822_P_NODE_36997_length_249_cov_0.886364_g36823_i0", "PRJNA849822", "36997", "249", "0.886364", "2.20704636", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "110", "6.16e-26", "", "NR", "MFP4643117.1", "2026792", "g36823", "i0", "67.5", "7.42168674698795", "77", "25", "92.8", "0", "249", "19", "133", "209", "MFP4643117.1 diphosphate--fructose-6-phosphate 1-phosphotransferase [Spirochaetales bacterium]", "diamond", "1848", "110", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [31793097, "PRJNA849822_P_NODE_35357_length_251_cov_0.876404_g35183_i0", "PRJNA849822", "35357", "251", "0.876404", "2.19977404", "Spirochaetales bacterium", "2026792", "Bacteria", "Bacteria", "43.5", "0.0217", "", "NR", "MFP4645001.1", "2026792", "g35183", "i0", "36.1", "3.28685258964143", "72", "46", "86.1", "0", "249", "34", "289", "360", "MFP4645001.1 SulP family inorganic anion transporter [Spirochaetales bacterium]", "diamond", "825", "43.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [32023116, "PRJNA849822_P_NODE_41638_length_244_cov_0.912281_g41464_i0", "PRJNA849822", "41638", "244", "0.912281", "2.22596564", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "96.3", "5.64e-21", "", "NR", "HMW04385.1", "2026757", "g41464", "i0", "61.7", "3.84836065573771", "81", "31", "99.6", "0", "2", "244", "3", "83", "HMW04385.1 PAS domain S-box protein [Leptospiraceae bacterium]", "diamond", "939", "97.1", "0.991761071060762", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", null, "Leptospiraceae bacterium"], [32054645, "PRJNA849822_P_NODE_39398_length_246_cov_0.901734_g39224_i0", "PRJNA849822", "39398", "246", "0.901734", "2.21826564", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "52.4", "1.49e-5", "", "NR", "MDR3114145.1", "166", "g39224", "i0", "44.8", "12.3658536585366", "58", "22", "58.5", "1", "33", "176", "255", "312", "MDR3114145.1 AAA family ATPase [Treponema sp.]", "diamond", "3042", "52.8", "0.992424242424242", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [32236623, "PRJNA849822_P_NODE_24158_length_295_cov_1.054054_g23984_i0", "PRJNA849822", "24158", "295", "1.054054", "3.1094593", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "50.1", "1.74e-4", "", "NR", "MBN2545270.1", "2202144", "g23984", "i0", "54.8", "0.427118644067797", "42", "19", "42.7", "0", "293", "168", "33", "74", "MBN2545270.1 ankyrin repeat domain-containing protein [Spirochaetota bacterium]", "diamond", "126", "50.1", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [32584436, "PRJNA849822_P_NODE_25599_length_287_cov_1.457944_g25425_i0", "PRJNA849822", "25599", "287", "1.457944", "4.18429928", "Treponema sp.", "166", "Bacteria", "Bacteria", "44.7", "0.0134", "", "NR", "MBP5403158.1", "166", "g25425", "i0", "36.2", "0.982578397212544", "94", "45", "93", "5", "5", "271", "375", "458", "MBP5403158.1 hypothetical protein [Treponema sp.]", "diamond", "282", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [32615740, "PRJNA849822_P_NODE_720_length_1786_cov_2.730298_g661_i0", "PRJNA849822", "720", "1786", "2.730298", "48.76312228", "Spirochaetia bacterium", "2053615", "Bacteria", "Bacteria", "131", "1.03e-27", "", "NR", "MDH5716307.1", "2053615", "g661", "i0", "35.6", "0.896976483762598", "278", "133", "42.5", "13", "68", "826", "129", "385", "MDH5716307.1 DUF4215 domain-containing protein [Spirochaetia bacterium]", "diamond", "1602", "131", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", null, null, null, "Spirochaetia bacterium"]], "truncated": false, "filtered_table_rows_count": 26, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA849822", "p1": "Pseudomonadati", "p2": "Spirochaetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "PRJNA849822", "label": "PRJNA849822", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "diamond", "label": "diamond", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Spirochaetota", "label": "Spirochaetota", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 544.4042449962581}