{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA849822\", tax_clade = \"Amoebozoa\" and tax_phylum = \"Tubulinea\"", "rows": [[838774, "PRJNA849822_P_NODE_7521_length_558_cov_1.484536_g7349_i0", "PRJNA849822", "7521", "558", "1.484536", "8.28371088", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "569", "1.2299999999999996e-157", "", "NTclustered", "gi|909719647|gb|KT185627.1|", "5778", "g7349", "i0", "85.231", "24.6111111111111", "562", "73", "100", "8", "1", "558", "25835", "26390", "Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome", "blastn", "13733", "569", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [3389233, "PRJNA849822_P_NODE_15483_length_369_cov_1.844595_g15309_i0", "PRJNA849822", "15483", "369", "1.844595", "6.80655555", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "499", "1.04e-136", "", "NTclustered", "gi|146335208|gb|EF216680.1|", "5778", "g15309", "i0", "91.105", "1.00542005420054", "371", "29", "100", "4", "1", "369", "1418", "1786", "Hartmannella vermiformis transketolase mRNA, complete cds", "blastn", "371", "499", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [3389260, "PRJNA849822_P_NODE_18723_length_334_cov_1.754789_g18549_i0", "PRJNA849822", "18723", "334", "1.754789", "5.86099526", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "424", "5.79e-114", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g18549", "i0", "89.412", "1.01796407185629", "340", "30", "100", "4", "1", "334", "1018", "679", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "340", "424", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [4666992, "PRJNA849822_P_NODE_15384_length_370_cov_2.942761_g15210_i0", "PRJNA849822", "15384", "370", "2.942761", "10.8882157", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "483", "1.05e-131", "", "NTclustered", "gi|292559443|ref|NC_013986.1|", "5778", "g15210", "i0", "95.38", "57.3054054054054", "303", "14", "82", "0", "68", "370", "20055", "20357", "Hartmannella vermiformis mitochondrion, complete genome", "blastn", "21203", "483", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [5941839, "PRJNA849822_P_NODE_29745_length_268_cov_1.200000_g29571_i0", "PRJNA849822", "29745", "268", "1.2", "3.216", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "198", "2.9799999999999998e-46", "", "NTclustered", "gi|909719647|gb|KT185627.1|", "5778", "g29571", "i0", "83.258", "85.25", "221", "31", "81", "5", "23", "238", "28119", "27900", "Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome", "blastn", "22847", "198", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [7611593, "PRJNA849822_P_NODE_4086_length_791_cov_18.732591_g3923_i0", "PRJNA849822", "4086", "791", "18.732591", "148.17479481", "Vermamoeba", "1260114", "Tubulinea", "other_Eukaryota", "1406", "0", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g3923", "i0", "98.736", "88.8445006321112", "791", "10", "100", "0", "1", "791", "5689", "4899", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "70276", "1406", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [11042185, "PRJNA849822_P_NODE_17249_length_349_cov_1.753623_g17075_i0", "PRJNA849822", "17249", "349", "1.753623", "6.12014427", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "442", "1.6699999999999993e-119", "", "NTclustered", "gi|89357437|gb|DQ407656.1|", "5778", "g17075", "i0", "93.046", "1.73065902578797", "302", "21", "87", "0", "48", "349", "1", "302", "Hartmannella vermiformis chitinase-like protein cluster A mRNA, partial cds", "blastn", "604", "442", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [13592403, "PRJNA849822_P_NODE_3871_length_816_cov_3.577389_g3712_i0", "PRJNA849822", "3871", "816", "3.577389", "29.19149424", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "1203", "0", "", "NTclustered", "gi|62910949|gb|AY925001.1|", "5778", "g3712", "i0", "96.311", "4.125", "732", "27", "90", "0", "2", "733", "732", "1", "Hartmannella vermiformis Rpl7A mRNA, partial cds", "blastn", "3366", "1203", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [14866611, "PRJNA849822_P_NODE_27192_length_279_cov_2.786408_g27018_i0", "PRJNA849822", "27192", "279", "2.786408", "7.77407832", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "99", "3.25e-16", "", "NTclustered", "gi|89357437|gb|DQ407656.1|", "5778", "g27018", "i0", "100", "0.189964157706093", "53", "0", "19", "0", "1", "53", "358", "410", "Hartmannella vermiformis chitinase-like protein cluster A mRNA, partial cds", "blastn", "53", "99", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [16141221, "PRJNA849822_P_NODE_10553_length_458_cov_2.774026_g10380_i0", "PRJNA849822", "10553", "458", "2.774026", "12.70503908", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "697", "0", "", "NTclustered", "gi|909719645|gb|KT185625.1|", "5778", "g10380", "i0", "94.105", "1", "458", "27", "100", "0", "1", "458", "666", "209", "Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence", "blastn", "458", "697", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [16141299, "PRJNA849822_P_NODE_21013_length_316_cov_1.283951_g20839_i0", "PRJNA849822", "21013", "316", "1.283951", "4.05728516", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "435", "2.5100000000000003e-117", "", "NTclustered", "gi|88601123|gb|DQ390348.1|", "5778", "g20839", "i0", "91.456", "1", "316", "27", "100", "0", "1", "316", "361", "46", "Hartmannella vermiformis lactate dehydrogenase-like protein mRNA, partial cds", "blastn", "316", "435", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [18689788, "PRJNA849822_P_NODE_10115_length_470_cov_1.934509_g9942_i0", "PRJNA849822", "10115", "470", "1.934509", "9.0921923", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "473", "8.229999999999999e-129", "", "NTclustered", "gi|88601207|gb|DQ384272.1|", "5778", "g9942", "i0", "91.988", "0.717021276595745", "337", "27", "72", "0", "134", "470", "14", "350", "Hartmannella vermiformis unknown mRNA", "blastn", "337", "473", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [19965010, "PRJNA849822_P_NODE_216_length_2608_cov_3.486391_g193_i0", "PRJNA849822", "216", "2608", "3.486391", "90.92507728", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "1234", "0", "", "NTclustered", "gi|421976355|gb|JQ519494.1|", "5778", "g193", "i0", "94.71", "63.1288343558282", "794", "42", "30", "0", "452", "1245", "1", "794", "Vermamoeba vermiformis clone JG10.150_g4 elongation factor 2 alpha gene, partial cds", "blastn", "164640", "1234", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [19965076, "PRJNA849822_P_NODE_28816_length_272_cov_1.371859_g28642_i0", "PRJNA849822", "28816", "272", "1.371859", "3.73145648", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "398", "2.7799999999999997e-106", "", "NTclustered", "gi|146335208|gb|EF216680.1|", "5778", "g28642", "i0", "93.609", "0.977941176470588", "266", "17", "98", "0", "1", "266", "316", "581", "Hartmannella vermiformis transketolase mRNA, complete cds", "blastn", "266", "398", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [21240633, "PRJNA849822_P_NODE_22537_length_305_cov_1.681034_g22363_i0", "PRJNA849822", "22537", "305", "1.681034", "5.1271537", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "436", "6.719999999999999e-118", "", "NTclustered", "gi|66270666|gb|AY950658.1|", "5778", "g22363", "i0", "92.459", "1.95409836065574", "305", "23", "100", "0", "1", "305", "324", "20", "Hartmannella vermiformis Nop58p mRNA, partial cds", "blastn", "596", "436", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"], [27970880, "PRJNA849822_P_NODE_26605_length_282_cov_1.492823_g26431_i0", "PRJNA849822", "26605", "282", "1.492823", "4.20976086", "Vermamoeba vermiformis", "5778", "Tubulinea", "other_Eukaryota", "160", "1.9e-43", "", "NR", "ABD62815.1", "5778", "g26431", "i0", "81.7", "0.98936170212766", "93", "17", "98.9", "0", "2", "280", "351", "443", "ABD62815.1 mitochondrial single-subunit RNA polymerase [Vermamoeba vermiformis]", "diamond", "279", "160", "1", "Eukaryota", "Amoebozoa", null, "Tubulinea", "Echinamoebida", null, null, "Vermamoeba", "Vermamoeba vermiformis"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA849822", "p1": "Amoebozoa", "p2": "Tubulinea"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "PRJNA849822", "label": "PRJNA849822", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Amoebozoa&tax_phylum=Tubulinea", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "blastn", "label": "blastn", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "Amoebozoa", "label": "Amoebozoa", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_phylum=Tubulinea", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa&tax_phylum=Tubulinea", "results": [{"value": "Tubulinea", "label": "Tubulinea", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA849822&tax_clade=Amoebozoa", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 374.67073099833215}