{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA841653\", tax_clade = \"Sar\" and tax_phylum = \"Oomycota\"", "rows": [[2105844, "PRJNA841653_P_NODE_29382_length_300_cov_2.933921_g28708_i0", "PRJNA841653", "29382", "300", "2.933921", "8.801763", "Peronospora myosotidis", "162098", "SAR_Eukaryotes", "SAR_Eukaryotes", "518", "2.29e-142", "", "NTclustered", "gi|23306490|gb|AY035473.1|", "162098", "g28708", "i0", "99.301", "98.42", "286", "2", "95", "0", "1", "286", "286", "1", "Peronospora myosotidis isolate MG 1-4 large subunit ribosomal RNA gene, partial sequence", "blastn", "29526", "518", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Peronospora", "Peronospora myosotidis"], [4658712, "PRJNA841653_P_NODE_25564_length_323_cov_0.900000_g24890_i0", "PRJNA841653", "25564", "323", "0.9", "2.907", "Peronosporaceae", "4777", "SAR_Eukaryotes", "SAR_Eukaryotes", "130", "9.31e-34", "", "NR", "NP_037607.1", "4787", "g24890", "i0", "66.3", "7.93188854489164", "95", "32", "88.2", "0", "32", "316", "132", "226", "NP_037607.1 NADH dehydrogenase subunit 7 [Phytophthora infestans]", "diamond", "2562", "130", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora infestans"], [5933614, "PRJNA841653_P_NODE_31705_length_289_cov_2.750000_g31031_i0", "PRJNA841653", "31705", "289", "2.75", "7.9475", "Peronospora sp.", "1982665", "SAR_Eukaryotes", "SAR_Eukaryotes", "531", "2.82e-146", "", "NTclustered", "gi|2703611743|gb|PP531600.1|", "1982665", "g31031", "i0", "100", "99.3148788927336", "287", "0", "99", "0", "1", "287", "598", "312", "Peronospora sp. voucher GLM-F68067 large subunit ribosomal RNA gene, partial sequence", "blastn", "28702", "531", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Peronospora", "Peronospora sp."], [8483626, "PRJNA841653_P_NODE_52087_length_246_cov_0.890173_g51413_i0", "PRJNA841653", "52087", "246", "0.890173", "2.18982558", "Saprolegnia diclina", "112098", "SAR_Eukaryotes", "SAR_Eukaryotes", "63.9", "1.03e-5", "", "NTclustered", "gi|669170970|ref|XM_008622612.1|", "1156394", "g51413", "i0", "93.182", "5.35365853658537", "44", "1", "17", "2", "28", "70", "265", "223", "Saprolegnia diclina VS20 rab family, other partial mRNA", "blastn", "1317", "63.9", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Saprolegniaceae", "Saprolegnia", "Saprolegnia diclina"], [9758598, "PRJNA841653_P_NODE_39188_length_263_cov_2.278947_g38514_i0", "PRJNA841653", "39188", "263", "2.278947", "5.99363061", "Albugo laibachii", "653948", "SAR_Eukaryotes", "SAR_Eukaryotes", "313", "9.979999999999999e-81", "", "NTclustered", "gi|325195057|emb|FR825852.1|", "890382", "g38514", "i0", "89.879", "82.6882129277567", "247", "19", "92", "5", "17", "259", "108", "352", "Albugo laibachii Nc14, genomic contig CONTIG_2891_NC14_v4_540_391", "blastn", "21747", "313", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Albuginales", "Albuginaceae", "Albugo", "Albugo laibachii"], [11434412, "PRJNA841653_P_NODE_2429_length_1148_cov_28.598140_g1997_i0", "PRJNA841653", "2429", "1148", "28.59814", "328.3066472", "Saprolegniales", "4763", "SAR_Eukaryotes", "SAR_Eukaryotes", "351", "1.03e-91", "", "NTclustered", "gi|533310373|ref|NC_022179.1|", "74557", "g1997", "i0", "81.004", "35.9721254355401", "458", "74", "39", "10", "487", "939", "13608", "14057", "Thraustotheca clavata mitochondrion, complete genome", "blastn", "41296", "351", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Achlyaceae", "Thraustotheca", "Thraustotheca clavata"], [13583653, "PRJNA841653_P_NODE_11271_length_496_cov_2.872340_g10602_i0", "PRJNA841653", "11271", "496", "2.87234", "14.2468064", "Paralagenidium karlingii", "1440115", "SAR_Eukaryotes", "SAR_Eukaryotes", "141", "9.999999999999999e-29", "", "NTclustered", "gi|2554484921|ref|NC_080886.1|", "1440115", "g10602", "i0", "90.09", "21.9173387096774", "111", "8", "22", "3", "345", "454", "41764", "41656", "Paralagenidium karlingii isolate 19-09020 mitochondrion, complete genome", "blastn", "10871", "141", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", null, null, "Paralagenidium", "Paralagenidium karlingii"], [14858542, "PRJNA841653_P_NODE_40372_length_259_cov_2.424731_g39698_i0", "PRJNA841653", "40372", "259", "2.424731", "6.28005329", "Saprolegnia parasitica", "101203", "SAR_Eukaryotes", "SAR_Eukaryotes", "97.1", "1.07e-15", "", "NTclustered", "gi|813142527|ref|XM_012343931.1|", "695850", "g39698", "i0", "87.805", "1.16216216216216", "82", "10", "32", "0", "65", "146", "1128", "1209", "Saprolegnia parasitica CBS 223.65 60S ribosomal protein L3 mRNA", "blastn", "301", "97.1", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Saprolegniaceae", "Saprolegnia", "Saprolegnia parasitica"], [18682030, "PRJNA841653_P_NODE_46315_length_250_cov_0.870056_g45641_i0", "PRJNA841653", "46315", "250", "0.870056", "2.17514", "Saprolegnia parasitica CBS 223.65", "695850", "SAR_Eukaryotes", "SAR_Eukaryotes", "117", "2.21e-28", "", "NR", "XP_012205517.1", "695850", "g45641", "i0", "68.3", "4.92", "82", "26", "98.4", "0", "5", "250", "551", "632", "XP_012205517.1 hypothetical protein SPRG_10477 [Saprolegnia parasitica CBS 223.65]", "diamond", "1230", "117", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Saprolegniaceae", "Saprolegnia", "Saprolegnia parasitica"], [19082469, "PRJNA841653_P_NODE_61195_length_241_cov_0.916667_g60521_i0", "PRJNA841653", "61195", "241", "0.916667", "2.20916747", "root", "1", "Root_unresolved", "Root_unresolved", "84.2", "7.69e-12", "", "NTclustered", "gi|189084724|gb|BT032242.1|", "4784", "g60521", "i0", "91.803", "20.954356846473", "61", "4", "25", "1", "71", "131", "152", "211", "Phytophthora capsici clone CBOT161-B07 mRNA sequence", "blastn", "5050", "84.2", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora capsici"], [19957334, "PRJNA841653_P_NODE_56876_length_244_cov_0.900585_g56202_i0", "PRJNA841653", "56876", "244", "0.900585", "2.1974274", "Aphanomyces", "100860", "SAR_Eukaryotes", "SAR_Eukaryotes", "89", "1.89e-18", "", "NR", "RHY90193.1", "112090", "g56202", "i0", "62", "6.02459016393443", "71", "26", "87.3", "1", "1", "213", "253", "322", "RHY90193.1 hypothetical protein DYB26_009734, partial [Aphanomyces astaci]", "diamond", "1470", "89.7", "0.992196209587514", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Verrucalvaceae", "Aphanomyces", "Aphanomyces astaci"], [23783066, "PRJNA841653_P_NODE_48259_length_248_cov_1.542857_g47585_i0", "PRJNA841653", "48259", "248", "1.542857", "3.82628536", "Aphanomyces euteiches", "100861", "SAR_Eukaryotes", "SAR_Eukaryotes", "65.8", "2.88e-6", "", "NTclustered", "gi|166035135|emb|CU348968.1|", "100861", "g47585", "i0", "87.097", "0.862903225806452", "62", "2", "25", "5", "49", "110", "133", "78", "Aphanomyces euteiches cDNA", "blastn", "214", "65.8", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Verrucalvaceae", "Aphanomyces", "Aphanomyces euteiches"], [24182295, "PRJNA841653_P_NODE_28039_length_308_cov_1.280851_g27365_i0", "PRJNA841653", "28039", "308", "1.280851", "3.94502108", "root", "1", "Root_unresolved", "Root_unresolved", "171", "7.61e-38", "", "NTclustered", "gi|145932422|ref|NC_009384.1|", "164328", "g27365", "i0", "79.2", "10.1038961038961", "250", "48", "81", "3", "30", "277", "22589", "22836", "Phytophthora ramorum mitochondrion, complete genome", "blastn", "3112", "171", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora ramorum"], [26959617, "PRJNA841653_P_NODE_58102_length_243_cov_0.905882_g57428_i0", "PRJNA841653", "58102", "243", "0.905882", "2.20129326", "Phytophthora capsici", "4784", "SAR_Eukaryotes", "SAR_Eukaryotes", "44.3", "0.0105", "", "NR", "KAG1711851.1", "4784", "g57428", "i0", "37.7", "0.753086419753086", "61", "33", "69.1", "2", "48", "215", "618", "678", "KAG1711851.1 hypothetical protein DVH05_009093 [Phytophthora capsici]", "diamond", "183", "44.3", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora capsici"], [29589074, "PRJNA841653_P_NODE_44810_length_250_cov_1.598870_g44136_i0", "PRJNA841653", "44810", "250", "1.59887", "3.997175", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "73.6", "5.85e-13", "", "NR", "TMW69051.1", "41045", "g44136", "i0", "39.5", "2.628", "76", "45", "90", "1", "19", "243", "939", "1014", "TMW69051.1 hypothetical protein Poli38472_001207 [Pythium oligandrum]", "diamond", "657", "73.9", "0.995940460081191", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium oligandrum"], [30474059, "PRJNA841653_P_NODE_38793_length_265_cov_1.161458_g38119_i0", "PRJNA841653", "38793", "265", "1.161458", "3.0778637", "Saprolegniales", "4763", "SAR_Eukaryotes", "SAR_Eukaryotes", "73.9", "5.19e-13", "", "NR", "OQR94210.1", "74557", "g38119", "i0", "53.8", "2.20754716981132", "65", "30", "73.6", "0", "1", "195", "361", "425", "OQR94210.1 hypothetical protein THRCLA_08223 [Thraustotheca clavata]", "diamond", "585", "74.3", "0.994616419919246", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Achlyaceae", "Thraustotheca", "Thraustotheca clavata"], [31295430, "PRJNA841653_P_NODE_27175_length_313_cov_1.062500_g26501_i0", "PRJNA841653", "27175", "313", "1.0625", "3.325625", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "160", "8.81e-44", "", "NR", "TMW61138.1", "41045", "g26501", "i0", "73", "8.59744408945687", "100", "27", "95.8", "0", "305", "6", "222", "321", "TMW61138.1 hypothetical protein Poli38472_013601 [Pythium oligandrum]", "diamond", "2691", "160", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium oligandrum"], [31611832, "PRJNA841653_P_NODE_29356_length_301_cov_0.956140_g28682_i0", "PRJNA841653", "29356", "301", "0.95614", "2.8779814", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "89", "3.65e-21", "", "NR", "CCI45616.1", "65357", "g28682", "i0", "91.5", "5.70099667774086", "47", "4", "46.8", "0", "296", "156", "5", "51", "CCI45616.1 unnamed protein product [Albugo candida]", "diamond", "1716", "89.4", "0.995525727069351", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Albuginales", "Albuginaceae", "Albugo", "Albugo candida"], [32046268, "PRJNA841653_P_NODE_48198_length_248_cov_1.725714_g47524_i0", "PRJNA841653", "48198", "248", "1.725714", "4.27977072", "Aphanomyces stellatus", "120398", "SAR_Eukaryotes", "SAR_Eukaryotes", "55.1", "1.82e-6", "", "NR", "KAF0686063.1", "120398", "g47524", "i0", "63.2", "0.459677419354839", "38", "14", "46", "0", "96", "209", "1318", "1355", "KAF0686063.1 hypothetical protein As57867_022056 [Aphanomyces stellatus]", "diamond", "114", "55.1", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Verrucalvaceae", "Aphanomyces", "Aphanomyces stellatus"], [32331344, "PRJNA841653_P_NODE_55699_length_244_cov_0.900585_g55025_i0", "PRJNA841653", "55699", "244", "0.900585", "2.1974274", "Phytophthora infestans T3", "4787", "SAR_Eukaryotes", "SAR_Eukaryotes", "41.2", "0.0399", "", "NR", "XP_002895242.1", "403677", "g55025", "i0", "31.5", "0.897540983606557", "73", "42", "89.8", "2", "231", "13", "10", "74", "XP_002895242.1 uncharacterized protein PITG_21130 [Phytophthora infestans T30-4]", "diamond", "219", "41.2", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora infestans"], [32709862, "PRJNA841653_P_NODE_55700_length_244_cov_0.900585_g55026_i0", "PRJNA841653", "55700", "244", "0.900585", "2.1974274", "Phytophthora nicotianae CJ", "4792", "SAR_Eukaryotes", "SAR_Eukaryotes", "137", "1.77e-38", "", "NR", "ETO99862.1", "1317063", "g55026", "i0", "100", "0.848360655737705", "69", "0", "84.8", "0", "38", "244", "1", "69", "ETO99862.1 hypothetical protein F441_22714, partial [Phytophthora nicotianae CJ01A1]", "diamond", "207", "137", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora nicotianae"], [32772799, "PRJNA841653_P_NODE_30080_length_297_cov_1.348214_g29406_i0", "PRJNA841653", "30080", "297", "1.348214", "4.00419558", "Aphanomyces euteiches", "100861", "SAR_Eukaryotes", "SAR_Eukaryotes", "101", "1.04e-22", "", "NR", "KAH9091351.1", "100861", "g29406", "i0", "50.5", "0.97979797979798", "97", "46", "98", "1", "7", "297", "389", "483", "KAH9091351.1 hypothetical protein LEN26_018763 [Aphanomyces euteiches]", "diamond", "291", "101", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Verrucalvaceae", "Aphanomyces", "Aphanomyces euteiches"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA841653", "p1": "Sar", "p2": "Oomycota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "PRJNA841653", "label": "PRJNA841653", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Sar&tax_phylum=Oomycota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "diamond", "label": "diamond", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "Sar", "label": "Sar", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_phylum=Oomycota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "Oomycota", "label": "Oomycota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA841653&tax_clade=Sar", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 218.6509349849075}