{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA816047\" and tax_clade = \"core chlorophytes\"", "rows": [[25737174, "PRJNA816047d_S_NODE_108130_length_246_cov_2.896373_g106295_i0", "PRJNA816047", "108130", "246", "2.896373", "7.12507758", "Prototheca miyajii", "2034260", "Plants", "Plants", "121", "6.01e-23", "", "NTclustered", "gi|2692959722|ref|NC_086909.1|", "2034260", "g106295", "i0", "88.889", "17.0609756097561", "99", "9", "39", "1", "51", "147", "31470", "31372", "Prototheca miyajii strain IFM53848 plastid, complete genome", "blastn", "4197", "121", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca miyajii"], [25741187, "PRJNA816047d_S_NODE_57322_length_296_cov_2.201646_g55487_i0", "PRJNA816047", "57322", "296", "2.201646", "6.51687216", "Prototheca lentecrescens", "2836214", "Plants", "Plants", "313", 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"4.9213446", "Prototheca wickerhamii", "3111", "Plants", "Plants", "68.2", "3.91e-11", "", "NR", "KAK2078531.1", "3111", "g121094", "i0", "64.4", "0.564853556485356", "45", "16", "56.5", "0", "85", "219", "116", "160", "KAK2078531.1 hypothetical protein QBZ16_003371 [Prototheca wickerhamii]", "diamond", "135", "68.2", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca wickerhamii"], [32922029, "PRJNA816047d_S_NODE_59353_length_292_cov_2.196653_g57518_i0", "PRJNA816047", "59353", "292", "2.196653", "6.41422676", "Trebouxia sp. 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C0010 RCD-2024"], [32942305, "PRJNA816047d_S_NODE_90953_length_256_cov_0.911330_g89118_i0", "PRJNA816047", "90953", "256", "0.91133", "2.3330048", "Eukaryota", "2759", "Plants", "Plants", "56.6", "5.61e-7", "", "NR", "RMZ57494.1", "3075", "g89118", "i0", "52.7", "3.7734375", "55", "25", "63.3", "1", "234", "73", "436", "490", "RMZ57494.1 hypothetical protein APUTEX25_003737, partial [Auxenochlorella protothecoides]", "diamond", "966", "56.6", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [32956070, "PRJNA816047d_S_NODE_112666_length_244_cov_2.062827_g110831_i0", "PRJNA816047", "112666", "244", "2.062827", "5.03329788", "Symbiochloris irregularis", "706552", "Plants", "Plants", "63.2", "2.45e-9", "", "NR", "KAK9797092.1", "706552", "g110831", "i0", "48.5", "2.49590163934426", "68", "32", "83.6", "1", "41", "244", "644", "708", "KAK9797092.1 hypothetical protein WJX73_009221 [Symbiochloris irregularis]", "diamond", "609", "63.2", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Symbiochloris", "Symbiochloris irregularis"], [32973200, "PRJNA816047d_S_NODE_122114_length_240_cov_2.593583_g120279_i0", "PRJNA816047", "122114", "240", "2.593583", "6.2245992", "Raphidocelis subcapitata", "307507", "Plants", "Plants", "68.6", "8.8e-13", "", "NR", "GBF89178.1", "307507", "g120279", "i0", "46.7", "1.7625", "75", "40", "93.8", "0", "229", "5", "29", "103", "GBF89178.1 hypothetical protein Rsub_01895 [Raphidocelis subcapitata]", "diamond", "423", "68.6", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Sphaeropleales", "Selenastraceae", "Raphidocelis", "Raphidocelis subcapitata"], [32973545, "PRJNA816047d_S_NODE_48314_length_316_cov_10466.000000_g46479_i0", "PRJNA816047", "48314", "316", "10466", "33072.56", "Prototheca lentecrescens", "2836214", "Plants", "Plants", "76.6", "1.15e-13", "", "NR", "YP_011059282.1", "2836214", "g46479", "i0", "59", "0.579113924050633", "61", "25", "57.9", "0", "316", "134", "598", "658", "YP_011059282.1 RNA polymerase subunit beta'' [Prototheca lentecrescens]", "diamond", "183", "76.6", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca lentecrescens"], [32976430, "PRJNA816047d_S_NODE_111650_length_245_cov_0.984375_g109815_i0", "PRJNA816047", "111650", "245", "0.984375", "2.41171875", "Coccomyxa", "41891", "Plants", "Plants", "56.2", "6.53e-7", "", "NR", "KAK9915439.1", "248742", "g109815", "i0", "51.4", "1.7265306122449", "70", "29", "83.3", "2", "7", "210", "332", "398", "KAK9915439.1 hypothetical protein WJX75_009230 [Coccomyxa subellipsoidea]", "diamond", "423", "56.2", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa subellipsoidea"], [32976520, "PRJNA816047d_S_NODE_47466_length_319_cov_1.172932_g45631_i0", "PRJNA816047", "47466", "319", "1.172932", "3.74165308", "Chlorellaceae", "35461", "Plants", "Plants", "55.1", "4.21e-6", "", "NR", "RMZ55658.1", "3075", "g45631", "i0", "56.1", "1.13793103448276", "41", "18", "38.6", "0", "177", "299", "646", "686", "RMZ55658.1 hypothetical protein APUTEX25_000241, partial [Auxenochlorella protothecoides]", "diamond", "363", "55.5", "0.992792792792793", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Auxenochlorella", "Auxenochlorella protothecoides"], [32990498, "PRJNA816047d_S_NODE_27251_length_409_cov_2.148876_g25421_i0", "PRJNA816047", "27251", "409", "2.148876", "8.78890284", "Symbiochloris irregularis", "706552", "Plants", "Plants", "51.6", "1.79e-4", "", "NR", "KAK9806499.1", "706552", "g25421", "i0", "61.4", "0.322738386308068", "44", "17", "32.3", "0", "394", "263", "663", "706", "KAK9806499.1 hypothetical protein WJX73_003689 [Symbiochloris irregularis]", "diamond", "132", "51.6", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Trebouxiales", "Trebouxiaceae", "Symbiochloris", "Symbiochloris irregularis"], [32993440, "PRJNA816047d_S_NODE_19987_length_492_cov_4.127563_g18186_i0", "PRJNA816047", "19987", "492", "4.127563", "20.30760996", "Eukaryota", "2759", "Plants", "Plants", "132", "1.31e-35", "", "NR", "CAG9461934.1", "765719", "g18186", "i0", "65.2", "5.42073170731707", "89", "31", "54.3", "0", "1", "267", "87", "175", "CAG9461934.1 unnamed protein product [Pedinophyceae sp. YPF-701]", "diamond", "2667", "133", "0.992481203007519", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Pedinophyceae", null, null, null, "Pedinophyceae sp. 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ATCC 5", "1907511", "Plants", "Plants", "181", "3.41e-51", "", "NR", "KDD76895.1", "1291522", "g14989", "i0", "62.3", "1.51086956521739", "138", "51", "74.5", "1", "3", "413", "327", "464", "KDD76895.1 citrate synthase [Helicosporidium sp. ATCC 50920]", "diamond", "834", "181", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Helicosporidium", "Helicosporidium sp. ATCC 50920"], [33143841, "PRJNA816047d_S_NODE_35495_length_359_cov_5.372549_g33660_i0", "PRJNA816047", "35495", "359", "5.372549", "19.28745091", "Gonium pectorale", "33097", "Plants", "Plants", "132", "2.42e-36", "", "NR", "KXZ41934.1", "33097", "g33660", "i0", "73.6", "3.05849582172702", "91", "23", "76", "1", "358", "86", "82", "171", "KXZ41934.1 hypothetical protein GPECTOR_240g576 [Gonium pectorale]", "diamond", "1098", "132", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Gonium", "Gonium pectorale"], [33144023, "PRJNA816047d_S_NODE_60023_length_291_cov_1.781513_g58188_i0", "PRJNA816047", "60023", "291", "1.781513", "5.18420283", "Prototheca wickerhamii", "3111", "Plants", "Plants", "68.6", "7.72e-12", "", "NR", "KAK2076916.1", "3111", "g58188", "i0", "48.4", "1.28865979381443", "64", "31", "63.9", "1", "3", "188", "42", "105", "KAK2076916.1 hypothetical protein QBZ16_005144 [Prototheca wickerhamii]", "diamond", "375", "68.6", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", "Chlorellales", "Chlorellaceae", "Prototheca", "Prototheca wickerhamii"], [33146919, "PRJNA816047d_S_NODE_106047_length_247_cov_2.613402_g104212_i0", "PRJNA816047", "106047", "247", "2.613402", "6.45510294", "Eukaryota", "2759", "Plants", "Plants", "107", "2.2e-27", "", "NR", "QZX50422.1", "3054", "g104212", "i0", "59.3", "8.95141700404858", "81", "33", "98.4", "0", "246", "4", "18", "98", "QZX50422.1 hypothetical protein, partial [Chlamydomonas moewusii]", "diamond", "2211", "107", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas moewusii"], [33147038, "PRJNA816047d_S_NODE_68839_length_276_cov_1.910314_g67004_i0", "PRJNA816047", "68839", "276", "1.910314", "5.27246664", "Eukaryota", "2759", "Plants", "Plants", "100", "1.67e-24", "", "NR", "XP_001697388.1", "3055", "g67004", "i0", "98", "101.04347826087", "51", "1", "55.4", "0", "3", "155", "103", "153", "XP_001697388.1 ribosomal protein S14 [Chlamydomonas reinhardtii]", "diamond", "27888", "100", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Chlamydomonadaceae", "Chlamydomonas", "Chlamydomonas reinhardtii"], [33160889, "PRJNA816047d_S_NODE_43880_length_329_cov_1.391304_g42045_i0", "PRJNA816047", "43880", "329", "1.391304", "4.57739016", "Gonium pectorale", "33097", "Plants", "Plants", "80.9", "4.16e-15", "", "NR", "KXZ51256.1", "33097", "g42045", "i0", "67.2", "0.556231003039514", "61", "17", "55.6", "1", "322", "140", "573", "630", "KXZ51256.1 hypothetical protein GPECTOR_13g743 [Gonium pectorale]", "diamond", "183", "80.9", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Chlorophyceae", "Chlamydomonadales", "Volvocaceae", "Gonium", "Gonium pectorale"], [33178198, "PRJNA816047d_S_NODE_44504_length_327_cov_1.832117_g42669_i0", "PRJNA816047", "44504", "327", "1.832117", "5.99102259", "Coccomyxa viridis", "1274662", "Plants", "Plants", "54.3", "1.35e-6", "", "NR", "CAK0782895.1", "1274662", "g42669", "i0", "48.3", "1.59633027522936", "60", "27", "51.4", "1", "324", "157", "49", "108", "CAK0782895.1 40S ribosomal protein S25-4 [Coccomyxa viridis]", "diamond", "522", "54.3", "1", "Eukaryota", "core chlorophytes", "Viridiplantae", "Chlorophyta", "Trebouxiophyceae", null, "Coccomyxaceae", "Coccomyxa", "Coccomyxa viridis"]], "truncated": false, "filtered_table_rows_count": 42, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA816047", "p1": "core chlorophytes"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes", "results": [{"value": "PRJNA816047", "label": "PRJNA816047", "count": 42, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=core+chlorophytes", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes", "results": [{"value": "diamond", "label": "diamond", "count": 31, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 42, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes", "results": [{"value": "core chlorophytes", "label": "core chlorophytes", "count": 42, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA816047", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes", "results": [{"value": "Viridiplantae", "label": "Viridiplantae", "count": 42, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes&tax_kingdom=Viridiplantae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes", "results": [{"value": "Chlorophyta", "label": "Chlorophyta", "count": 42, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA816047&tax_clade=core+chlorophytes&tax_phylum=Chlorophyta", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 190.51215499996488}