{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA784979\" and tax_clade = \"PVC group\"", "rows": [[7143991, "PRJNA784979_S_NODE_12466_length_163_cov_0.894737_g12424_i0", "PRJNA784979", "12466", "163", "0.894737", "1.45842131", "Phycisphaerae bacterium", "2026778", "Bacteria", "Bacteria", "118", "1.71e-32", "", "NR", "MFN9975414.1", "2026778", "g12424", "i0", "92.6", "1.98773006134969", "54", "4", "99.4", "0", "2", "163", "5", "58", "MFN9975414.1 M20/M25/M40 family metallo-hydrolase [Phycisphaerae bacterium]", "diamond", "324", "118", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Phycisphaerae", null, null, null, "Phycisphaerae bacterium"], [7143993, "PRJNA784979_S_NODE_12626_length_162_cov_1.628319_g12584_i0", "PRJNA784979", "12626", "162", "1.628319", "2.63787678", "Pedosphaera parvula", "1032527", "Bacteria", "Bacteria", "267", "4.419999999999999e-67", "", "NTclustered", "gi|183579829|emb|AM905426.1|", "320771", "g12584", "i0", "96.855", "89.1604938271605", "159", "5", "98", "0", "1", "159", "1930", "2088", "Bacterium Ellin514 23S rRNA gene, isolate Ellin514", "blastn", "14444", "267", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Pedosphaerae", "Pedosphaerales", "Pedosphaeraceae", "Pedosphaera", "Pedosphaera parvula"], [13519305, "PRJNA784979_S_NODE_11111_length_165_cov_1.405172_g11069_i0", "PRJNA784979", "11111", "165", "1.405172", "2.3185338", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "187", "3.6199999999999985e-43", "", "NTclustered", "gi|2874253779|emb|OY969763.1|", "412056", "g11069", "i0", "88.387", "31.9272727272727", "155", "18", "94", "0", "1", "155", "3831353", "3831507", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1", "blastn", "5268", "187", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [17791040, "PRJNA784979_S_NODE_11034_length_165_cov_1.974138_g10992_i0", "PRJNA784979", "11034", "165", "1.974138", "3.2573277", "Schlesneria", "656899", "Bacteria", "Bacteria", "265", "1.6299999999999998e-66", "", "NTclustered", "gi|12583970|gb|AF245374.1|AF245374", "149589", "g10992", "i0", "96.835", "110.018181818182", "158", "5", "96", "0", "4", "161", "2151", "2308", "Planctomycete str. 639 23S ribosomal RNA gene, partial sequence", "blastn", "18153", "265", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", null, "planctomycete str. 639"], [18617141, "PRJNA784979_S_NODE_9735_length_170_cov_0.735537_g9693_i0", "PRJNA784979", "9735", "170", "0.735537", "1.2504129", "Lacunisphaera limnophila", "1838286", "Bacteria", "Bacteria", "274", "2.79e-69", "", "NTclustered", "gi|1070531674|gb|CP016094.1|", "1838286", "g9693", "i0", "96.97", "89.6647058823529", "165", "2", "96", "3", "7", "170", "2557431", "2557269", "Lacunisphaera limnophila strain IG16b, complete genome", "blastn", "15243", "274", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Lacunisphaera", "Lacunisphaera limnophila"], [24992004, "PRJNA784979_S_NODE_4280_length_228_cov_1.033520_g4238_i0", "PRJNA784979", "4280", "228", "1.03352", "2.3564256", "Frigoriglobus tundricola", "2774151", "Bacteria", "Bacteria", "241", "4.04e-59", "", "NTclustered", "gi|1870286614|gb|CP053452.2|", "2774151", "g4238", "i0", "91.477", "77.469298245614", "176", "14", "77", "1", "9", "184", "4960647", "4960473", "Frigoriglobus tundricola strain PL17 chromosome, complete genome", "blastn", "17663", "241", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Frigoriglobus", "Frigoriglobus tundricola"], [24992026, "PRJNA784979_S_NODE_7540_length_186_cov_0.912409_g7498_i0", "PRJNA784979", "7540", "186", "0.912409", "1.69708074", "Verrucomicrobium spinosum", "2736", "Bacteria", "Bacteria", "220", "4.12e-53", "", "NTclustered", "gi|12583973|gb|AF245377.1|", "240016", "g7498", "i0", "92.258", "231.333333333333", "155", "12", "83", "0", "24", "178", "928", "774", "Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence", "blastn", "43028", "220", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Verrucomicrobium", "Verrucomicrobium spinosum"], [26768761, "PRJNA784979_S_NODE_13101_length_161_cov_1.928571_g13059_i0", "PRJNA784979", "13101", "161", "1.928571", "3.10499931", "Planctomycetaceae bacterium", "2026779", "Bacteria", "Bacteria", "68.2", "1.3e-11", "", "NR", "MDB5334893.1", "2026779", "g13059", "i0", "60", "0.838509316770186", "45", "18", "83.9", "0", "159", "25", "249", "293", "MDB5334893.1 hypothetical protein [Planctomycetaceae bacterium]", "diamond", "135", "68.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", null, "Planctomycetaceae bacterium"], [27496121, "PRJNA784979_S_NODE_9363_length_172_cov_1.243902_g9321_i0", "PRJNA784979", "9363", "172", "1.243902", "2.13951144", "Phycisphaerales bacterium", "2052180", "Bacteria", "Bacteria", "45.1", "3.92e-4", "", "NR", "MBL4698368.1", "2052180", "g9321", "i0", "88", "0.436046511627907", "25", "3", "43.6", "0", "76", "2", "21", "45", "MBL4698368.1 hypothetical protein [Phycisphaerales bacterium]", "diamond", "75", "45.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Phycisphaerae", "Phycisphaerales", null, null, "Phycisphaerales bacterium"], [28696034, "PRJNA784979_S_NODE_10807_length_166_cov_0.871795_g10765_i0", "PRJNA784979", "10807", "166", "0.871795", "1.4471797", "Isosphaeraceae bacterium", "2691532", "Bacteria", "Bacteria", "74.7", "2.71e-15", "", "NR", "HEU5118688.1", "2691532", "g10765", "i0", "87.2", "0.704819277108434", "39", "5", "70.5", "0", "162", "46", "101", "139", "HEU5118688.1 hypothetical protein [Isosphaeraceae bacterium]", "diamond", "117", "74.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Isosphaerales", "Isosphaeraceae", null, "Isosphaeraceae bacterium"], [28831316, "PRJNA784979_S_NODE_8148_length_181_cov_1.143939_g8106_i0", "PRJNA784979", "8148", "181", "1.143939", "2.07052959", "Bacteria", "2", "Bacteria", "Bacteria", "97.8", "1.17e-22", "", "NR", "MDA1178798.1", "2026780", "g8106", "i0", "70.2", "3.77900552486188", "57", "17", "94.5", "0", "181", "11", "72", "128", "MDA1178798.1 site-specific DNA-methyltransferase [Planctomycetota bacterium]", "diamond", "684", "98.6", "0.991886409736308", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "Planctomycetota bacterium"], [29453293, "PRJNA784979_S_NODE_12470_length_163_cov_0.894737_g12428_i0", "PRJNA784979", "12470", "163", "0.894737", "1.45842131", "Planctomycetota bacterium", "2026780", "Bacteria", "Bacteria", "106", "1.4e-26", "", "NR", "MEQ1895140.1", "2026780", "g12428", "i0", "96.3", "0.993865030674847", "54", "2", "99.4", "0", "2", "163", "81", "134", "MEQ1895140.1 sulfatase-like hydrolase/transferase [Planctomycetota bacterium]", "diamond", "162", "106", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "Planctomycetota bacterium"], [29548159, "PRJNA784979_S_NODE_12170_length_163_cov_1.333333_g12128_i0", "PRJNA784979", "12170", "163", "1.333333", "2.17333279", "uncultured Gimesia sp.", "1678688", "Bacteria", "Bacteria", "48.5", "1.08e-4", "", "NR", "WP_339736255.1", "1678688", "g12128", "i0", "51", "0.901840490797546", "49", "24", "90.2", "0", "152", "6", "95", "143", "WP_339736255.1 AAA family ATPase [uncultured Gimesia sp.]", "diamond", "147", "48.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", "Gimesia", "uncultured Gimesia sp."], [29642733, "PRJNA784979_S_NODE_13230_length_161_cov_1.223214_g13188_i0", "PRJNA784979", "13230", "161", "1.223214", "1.96937454", "Gemmata sp. SH-PL17", "1630693", "Bacteria", "Bacteria", "42.7", "0.0119", "", "NR", "WP_082842093.1", "1630693", "g13188", "i0", "46.9", "0.91304347826087", "49", "26", "91.3", "0", "2", "148", "9", "57", "WP_082842093.1 RecB family exonuclease [Gemmata sp. SH-PL17]", "diamond", "147", "42.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", "Gemmata", "Gemmata sp. SH-PL17"], [30370064, "PRJNA784979_S_NODE_11752_length_164_cov_0.886957_g11710_i0", "PRJNA784979", "11752", "164", "0.886957", "1.45460948", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "61.6", "2.74e-9", "", "NR", "MBA3817110.1", "2052176", "g11710", "i0", "46.2", "1.9390243902439", "52", "28", "95.1", "0", "1", "156", "247", "298", "MBA3817110.1 hypothetical protein [Parachlamydiaceae bacterium]", "diamond", "318", "61.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [30401671, "PRJNA784979_S_NODE_10313_length_167_cov_0.864407_g10271_i0", "PRJNA784979", "10313", "167", "0.864407", "1.44355969", "Pirellulales bacterium", "2715253", "Bacteria", "Bacteria", "70.5", "2.19e-12", "", "NR", "MEX2113015.1", "2715253", "g10271", "i0", "62.7", "0.916167664670659", "51", "19", "91.6", "0", "159", "7", "661", "711", "MEX2113015.1 choice-of-anchor L domain-containing protein [Pirellulales bacterium]", "diamond", "153", "70.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Pirellulales", null, null, "Pirellulales bacterium"], [30631479, "PRJNA784979_S_NODE_6793_length_193_cov_1.159722_g6751_i0", "PRJNA784979", "6793", "193", "1.159722", "2.23826346", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "64.7", "3.28e-10", "", "NR", "PYM11754.1", "2026799", "g6751", "i0", "48.4", "7.72538860103627", "62", "32", "96.4", "0", "192", "7", "181", "242", "PYM11754.1 MAG: replicative DNA helicase, partial [Verrucomicrobiota bacterium]", "diamond", "1491", "64.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31033394, "PRJNA784979_S_NODE_2655_length_283_cov_1.645299_g2613_i0", "PRJNA784979", "2655", "283", "1.645299", "4.65619617", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "187", "1.06e-57", "", "NR", "MFI0436135.1", "2052176", "g2613", "i0", "96.8", "0.996466431095406", "94", "3", "99.6", "0", "283", "2", "95", "188", "MFI0436135.1 terminase large subunit [Parachlamydiaceae bacterium]", "diamond", "282", "187", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [31159133, "PRJNA784979_S_NODE_11355_length_165_cov_0.879310_g11313_i0", "PRJNA784979", "11355", "165", "0.87931", "1.4508615", "Tepidisphaeraceae bacterium", "2876886", "Bacteria", "Bacteria", "63.2", "8.19e-10", "", "NR", "MFT3785234.1", "2876886", "g11313", "i0", "56.6", "0.963636363636364", "53", "23", "96.4", "0", "162", "4", "216", "268", "MFT3785234.1 hypothetical protein [Tepidisphaeraceae bacterium]", "diamond", "159", "63.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Phycisphaerae", "Tepidisphaerales", "Tepidisphaeraceae", null, "Tepidisphaeraceae bacterium"], [31570837, "PRJNA784979_S_NODE_12856_length_162_cov_0.902655_g12814_i0", "PRJNA784979", "12856", "162", "0.902655", "1.4623011", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "57.8", "6.33e-8", "", "NR", "MEW6303779.1", "2026799", "g12814", "i0", "51.9", "1", "54", "25", "100", "1", "162", "1", "310", "362", "MEW6303779.1 SNF2-related protein [Verrucomicrobiota bacterium]", "diamond", "162", "57.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [32298638, "PRJNA784979_S_NODE_12319_length_163_cov_0.894737_g12277_i0", "PRJNA784979", "12319", "163", "0.894737", "1.45842131", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "50.1", "3.28e-5", "", "NR", "MEO5720484.1", "2201154", "g12277", "i0", "46.2", "2.83435582822086", "52", "26", "92", "1", "8", "157", "10", "61", "MEO5720484.1 class I SAM-dependent methyltransferase [Chthoniobacterales bacterium]", "diamond", "462", "50.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"], [32520016, "PRJNA784979_S_NODE_12739_length_162_cov_1.097345_g12697_i0", "PRJNA784979", "12739", "162", "1.097345", "1.7776989", "Nibricoccus aquaticus", "2576891", "Bacteria", "Bacteria", "80.5", "1.03e-16", "", "NR", "WP_096055814.1", "2576891", "g12697", "i0", "71.7", "0.981481481481482", "53", "12", "98.1", "1", "159", "1", "25", "74", "WP_096055814.1 hypothetical protein [Nibricoccus aquaticus]", "diamond", "159", "80.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", "Nibricoccus", "Nibricoccus aquaticus"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA784979", "p1": "PVC group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group", "results": [{"value": "PRJNA784979", "label": "PRJNA784979", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group", "results": [{"value": "diamond", "label": "diamond", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group", "results": [{"value": "PVC group", "label": "PVC group", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group", "results": [{"value": "Planctomycetota", "label": "Planctomycetota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group&tax_phylum=Planctomycetota", "selected": false}, {"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": false}, {"value": "Chlamydiota", "label": "Chlamydiota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA784979&tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 285.7101240006159}