{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA782551\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Campylobacterota\"", "rows": [[4592002, "PRJNA782551_P_NODE_21644_length_244_cov_1.368421_g21522_i0", "PRJNA782551", "21644", "244", "1.368421", "3.33894724", "Campylobacter showae", "204", "Bacteria", "Bacteria", "396", "8.829999999999997e-106", "", "NTclustered", "gi|1622747600|gb|CP012544.1|", "204", "g21522", "i0", "95.902", "10.6516393442623", "244", "10", "100", "0", "1", "244", "396894", "397137", "Campylobacter showae strain ATCC 51146 chromosome, complete genome", "blastn", "2599", "396", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [5867183, "PRJNA782551_P_NODE_2065_length_678_cov_2.277686_g1949_i0", "PRJNA782551", "2065", "678", "2.277686", "15.44271108", "Campylobacter showae", "204", "Bacteria", "Bacteria", "1247", "0", "", "NTclustered", "gi|1483583529|emb|LT631453.1|", "204", "g1949", "i0", "99.853", "227.37610619469", "678", "1", "100", "0", "1", "678", "389859", "389182", "Campylobacter showae strain B91_SCBr genome assembly, chromosome: I", "blastn", "154161", "1247", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [7142179, "PRJNA782551_P_NODE_18406_length_248_cov_0.880000_g18284_i0", "PRJNA782551", "18406", "248", "0.88", "2.1824", "Campylobacter showae", "204", "Bacteria", "Bacteria", "398", "2.5e-106", "", "NTclustered", "gi|1483583529|emb|LT631453.1|", "204", "g18284", "i0", "95.565", "9.54838709677419", "248", "11", "100", "0", "1", "248", "1301537", "1301290", "Campylobacter showae strain B91_SCBr genome assembly, chromosome: I", "blastn", "2368", "398", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [7142254, "PRJNA782551_P_NODE_23546_length_242_cov_0.911243_g23424_i0", "PRJNA782551", "23546", "242", "0.911243", "2.20520806", "Campylobacter showae", "204", "Bacteria", "Bacteria", "276", "1.19e-69", "", "NTclustered", "gi|1483583529|emb|LT631453.1|", "204", "g23424", "i0", "87.19", "9", "242", "31", "100", "0", "1", "242", "66783", "66542", "Campylobacter showae strain B91_SCBr genome assembly, chromosome: I", "blastn", "2178", "276", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [12243156, "PRJNA782551_P_NODE_10930_length_287_cov_1.439252_g10808_i0", "PRJNA782551", "10930", "287", "1.439252", "4.13065324", "Campylobacter rectus", "203", "Bacteria", "Bacteria", "470", "6.18e-128", "", "NTclustered", "gi|1622745323|gb|CP012543.1|", "203", "g10808", "i0", "96.491", "3.96515679442509", "285", "9", "99", "1", "1", "285", "1213577", "1213294", "Campylobacter rectus strain ATCC 33238, complete genome", "blastn", "1138", "470", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter rectus"], [21166238, "PRJNA782551_P_NODE_17617_length_249_cov_0.875000_g17495_i0", "PRJNA782551", "17617", "249", "0.875", "2.17875", "Campylobacter rectus", "203", "Bacteria", "Bacteria", "418", "1.9299999999999995e-112", "", "NTclustered", "gi|1622745323|gb|CP012543.1|", "203", "g17495", "i0", "97.166", "152.618473895582", "247", "7", "99", "0", "3", "249", "157332", "157578", "Campylobacter rectus strain ATCC 33238, complete genome", "blastn", "38002", "418", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter rectus"], [22441021, "PRJNA782551_P_NODE_20298_length_246_cov_0.890173_g20176_i0", "PRJNA782551", "20298", "246", "0.890173", "2.18982558", "Campylobacter showae", "204", "Bacteria", "Bacteria", "388", "1.49e-103", "", "NTclustered", "gi|1483583493|emb|LT631417.1|", "204", "g20176", "i0", "95.122", "9.01626016260163", "246", "12", "100", "0", "1", "246", "778986", "778741", "Campylobacter showae genome assembly, chromosome: I", "blastn", "2218", "388", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [23716474, "PRJNA782551_P_NODE_18399_length_248_cov_0.880000_g18277_i0", "PRJNA782551", "18399", "248", "0.88", "2.1824", "Campylobacter showae", "204", "Bacteria", "Bacteria", "335", "1.9899999999999996e-87", "", "NTclustered", "gi|1483583529|emb|LT631453.1|", "204", "g18277", "i0", "94.091", "8.5241935483871", "220", "13", "89", "0", "2", "221", "1427071", "1426852", "Campylobacter showae strain B91_SCBr genome assembly, chromosome: I", "blastn", "2114", "335", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [31380972, "PRJNA782551_P_NODE_19196_length_247_cov_0.885057_g19074_i0", "PRJNA782551", "19196", "247", "0.885057", "2.18609079", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "69.7", "2.54e-13", "", "NR", "GAA6795649.1", "210", "g19074", "i0", "84.4", "1.91902834008097", "77", "12", "93.5", "0", "245", "15", "22", "98", "GAA6795649.1 hypothetical protein Kyoto200A_0500 [Helicobacter pylori]", "diamond", "474", "69.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA782551", "p1": "Pseudomonadati", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA782551", "label": "PRJNA782551", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "blastn", "label": "blastn", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA782551&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 321.05145400055335}