{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA763243\" and tax_phylum = \"Thermodesulfobacteriota\"", "rows": [[744058, "PRJNA763243_P_NODE_73061_length_206_cov_4.458647_g72715_i0", "PRJNA763243", "73061", "206", "4.458647", "9.18481282", "Desulfovibrio fairfieldensis", "44742", "Bacteria", "Bacteria", "209", "1.01e-49", "", "NTclustered", "gi|987453195|gb|CP014229.1|", "44742", "g72715", "i0", "87.845", "114.45145631068", "181", "19", "87", "3", "4", "182", "164330", "164509", "Desulfovibrio fairfieldensis strain CCUG 45958 chromosome, complete genome", "blastn", "23577", "209", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio fairfieldensis"], [2480724, "PRJNA763243_P_NODE_50802_length_253_cov_0.911111_g50456_i0", "PRJNA763243", "50802", "253", "0.911111", "2.30511083", "Nitratidesulfovibrio", "2802295", "Bacteria", "Bacteria", "363", "9.339999999999996e-96", "", "NTclustered", "gi|2791413552|dbj|AP036014.1|", "2009266", "g50456", "i0", "94.118", "471.241106719368", "238", "14", "94", "0", "4", "241", "226298", "226535", "Nitratidesulfovibrio sp. HK-II DNA, complete genome", "blastn", "119224", "363", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Nitratidesulfovibrio", "Nitratidesulfovibrio sp. HK-II"], [4572321, "PRJNA763243_P_NODE_70244_length_219_cov_6.287671_g69898_i0", "PRJNA763243", "70244", "219", "6.287671", "13.76999949", "Desulfovibrio fairfieldensis", "44742", "Bacteria", "Bacteria", "254", "4.95e-63", "", "NTclustered", "gi|987453195|gb|CP014229.1|", "44742", "g69898", "i0", "89.604", "205.100456621005", "202", "18", "91", "3", "2", "201", "164408", "164608", "Desulfovibrio fairfieldensis strain CCUG 45958 chromosome, complete genome", "blastn", "44917", "254", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio fairfieldensis"], [9672530, "PRJNA763243_P_NODE_73928_length_202_cov_11.713178_g73582_i0", "PRJNA763243", "73928", "202", "11.713178", "23.66061956", "Desulfovibrio desulfuricans", "876", "Bacteria", "Bacteria", "200", "5.929999999999999e-47", "", "NTclustered", "gi|1621566608|gb|CP036295.1|", "876", "g73582", "i0", "84.878", "233.346534653465", "205", "23", "99", "8", "1", "199", "493205", "493003", "Desulfovibrio desulfuricans strain IC1 chromosome, complete genome", "blastn", "47136", "200", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio desulfuricans"], [13496703, "PRJNA763243_P_NODE_27131_length_313_cov_1.620833_g26785_i0", "PRJNA763243", "27131", "313", "1.620833", "5.07320729", "Nitratidesulfovibrio liaohensis", "2604158", "Bacteria", "Bacteria", "381", "3.289999999999999e-101", "", "NTclustered", "gi|2575677524|gb|CP133659.1|", "2604158", "g26785", "i0", "89.542", "251.134185303514", "306", "24", "96", "6", "3", "303", "1255416", "1255718", "Nitratidesulfovibrio liaohensis strain KPS chromosome, complete genome", "blastn", "78605", "381", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Nitratidesulfovibrio", "Nitratidesulfovibrio liaohensis"], [13497750, "PRJNA763243_P_NODE_70491_length_218_cov_4.068966_g70145_i0", "PRJNA763243", "70491", "218", "4.068966", "8.87034588", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "97.4", "4.68e-24", "", "NR", "GJM17744.1", "2202153", "g70145", "i0", "69.7", "0.908256880733945", "66", "20", "90.8", "0", "214", "17", "62", "127", "GJM17744.1 MAG: hypothetical protein DHS20C13_30710 [Thermodesulfobacteriota bacterium]", "diamond", "198", "97.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [14771774, "PRJNA763243_P_NODE_2312_length_867_cov_17.265743_g2068_i0", "PRJNA763243", "2312", "867", "17.265743", "149.69399181", "Nitratidesulfovibrio liaohensis", "2604158", "Bacteria", "Bacteria", "933", "0", "", "NTclustered", "gi|2575677524|gb|CP133659.1|", "2604158", "g2068", "i0", "86.338", "283.953863898501", "871", "101", "99", "17", "2", "865", "1254314", "1255173", "Nitratidesulfovibrio liaohensis strain KPS chromosome, complete genome", "blastn", "246188", "933", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Nitratidesulfovibrio", "Nitratidesulfovibrio liaohensis"], [15233611, "PRJNA763243_P_NODE_10112_length_472_cov_3.210526_g9769_i0", "PRJNA763243", "10112", "472", "3.210526", "15.15368272", "Oleidesulfovibrio", "2909705", "Bacteria", "Bacteria", "473", "8.269999999999999e-129", "", "NTclustered", "gi|470477329|ref|NR_076377.1|", "58180", "g9769", "i0", "85.288", "306.701271186441", "469", "58", "98", "10", "11", "472", "11", "475", "Desulfovibrio alaskensis strain G20 23S ribosomal RNA gene, complete sequence", "blastn", "144763", "473", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Oleidesulfovibrio", "Oleidesulfovibrio alaskensis"], [15233700, "PRJNA763243_P_NODE_292_length_1906_cov_12.763230_g231_i0", "PRJNA763243", "292", "1906", "12.76323", "243.2671638", "Oleidesulfovibrio", "2909705", "Bacteria", "Bacteria", "1844", "0", "", "NTclustered", "gi|470477329|ref|NR_076377.1|", "58180", "g231", "i0", "84.575", "275.285939139559", "1906", "243", "98", "43", "33", "1905", "1", "1888", "Desulfovibrio alaskensis strain G20 23S ribosomal RNA gene, complete sequence", "blastn", "524695", "1849", "0.997295835586804", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Oleidesulfovibrio", "Oleidesulfovibrio alaskensis"], [16045295, "PRJNA763243_P_NODE_1293_length_1089_cov_9.834646_g1113_i0", "PRJNA763243", "1293", "1089", "9.834646", "107.09929494", "Desulfovibrio fairfieldensis", "44742", "Bacteria", "Bacteria", "1123", "0", "", "NTclustered", "gi|987453195|gb|CP014229.1|", "44742", "g1113", "i0", "85.494", "294.081726354454", "1103", "130", "99", "26", "1", "1086", "165130", "164041", "Desulfovibrio fairfieldensis strain CCUG 45958 chromosome, complete genome", "blastn", "320255", "1123", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio fairfieldensis"], [16508239, "PRJNA763243_P_NODE_72333_length_209_cov_6.772059_g71987_i0", "PRJNA763243", "72333", "209", "6.772059", "14.15360331", "Desulfovibrionaceae", "194924", "Bacteria", "Bacteria", "285", "1.6599999999999998e-72", "", "NTclustered", "gi|1863422180|gb|CP045504.1|", "1121464", "g71987", "i0", "92.157", "253.693779904306", "204", "12", "97", "4", "3", "204", "1153525", "1153324", "Desulfolutivibrio sulfodismutans DSM 3696 chromosome, complete genome", "blastn", "53022", "285", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfolutivibrio", "Desulfolutivibrio sulfodismutans"], [19870238, "PRJNA763243_P_NODE_44776_length_265_cov_3.453125_g44430_i0", "PRJNA763243", "44776", "265", "3.453125", "9.15078125", "Desulfovibrio fairfieldensis", "44742", "Bacteria", "Bacteria", "309", "1.3e-79", "", "NTclustered", "gi|987453195|gb|CP014229.1|", "44742", "g44430", "i0", "88.077", "181.901886792453", "260", "31", "98", "0", "3", "262", "164374", "164115", "Desulfovibrio fairfieldensis strain CCUG 45958 chromosome, complete genome", "blastn", "48204", "309", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio fairfieldensis"], [19870390, "PRJNA763243_P_NODE_51836_length_251_cov_0.865169_g51490_i0", "PRJNA763243", "51836", "251", "0.865169", "2.17157419", "Candidatus Mailhella excrementigallinarum", "2838656", "Bacteria", "Bacteria", "79.7", "3.88e-15", "", "NR", "HIV65968.1", "2838656", "g51490", "i0", "68.4", "7.41035856573705", "57", "18", "68.1", "0", "248", "78", "116", "172", "HIV65968.1 FAD-binding protein [Candidatus Mailhella excrementigallinarum]", "diamond", "1860", "79.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Mailhella", "Candidatus Mailhella excrementigallinarum"], [21145898, "PRJNA763243_P_NODE_41917_length_272_cov_1.648241_g41571_i0", "PRJNA763243", "41917", "272", "1.648241", "4.48321552", "Desulfuromonas soudanensis", "1603606", "Bacteria", "Bacteria", "248", "2.97e-61", "", "NTclustered", "gi|924528553|gb|CP010802.1|", "1603606", "g41571", "i0", "94.444", "108.238970588235", "162", "7", "59", "1", "21", "180", "2966903", "2966742", "Desulfuromonas soudanensis strain WTL chromosome, complete genome", "blastn", "29441", "248", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Desulfuromonadales", "Desulfuromonadaceae", "Desulfuromonas", "Desulfuromonas soudanensis"], [21607283, "PRJNA763243_P_NODE_13157_length_420_cov_2307.504323_g12812_i0", "PRJNA763243", "13157", "420", "2307.504323", "9691.5181566", "Nitratidesulfovibrio", "2802295", "Bacteria", "Bacteria", "333", "1.29e-86", "", "NTclustered", "gi|470481435|ref|NR_076474.1|", "881", "g12812", "i0", "87.329", "288.707142857143", "292", "35", "69", "2", "128", "417", "302", "11", "Desulfovibrio vulgaris strain DP4 23S ribosomal RNA gene, complete sequence", "blastn", "121257", "333", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Nitratidesulfovibrio", "Nitratidesulfovibrio vulgaris"], [22421209, "PRJNA763243_P_NODE_67738_length_229_cov_3.410256_g67392_i0", "PRJNA763243", "67738", "229", "3.410256", "7.80948624", "Nitratidesulfovibrio sp. HK-II", "2009266", "Bacteria", "Bacteria", "322", "1.41e-83", "", "NTclustered", "gi|2791413552|dbj|AP036014.1|", "2009266", "g67392", "i0", "92.511", "262.475982532751", "227", "14", "98", "3", "1", "225", "226094", "226319", "Nitratidesulfovibrio sp. HK-II DNA, complete genome", "blastn", "60107", "322", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Nitratidesulfovibrio", "Nitratidesulfovibrio sp. HK-II"], [24969308, "PRJNA763243_P_NODE_15420_length_393_cov_1.631250_g15075_i0", "PRJNA763243", "15420", "393", "1.63125", "6.4108125", "Nitratidesulfovibrio liaohensis", "2604158", "Bacteria", "Bacteria", "508", "1.86e-139", "", "NTclustered", "gi|2575677524|gb|CP133659.1|", "2604158", "g15075", "i0", "90.306", "336.64631043257", "392", "32", "99", "5", "4", "393", "3034018", "3034405", "Nitratidesulfovibrio liaohensis strain KPS chromosome, complete genome", "blastn", "132302", "508", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Nitratidesulfovibrio", "Nitratidesulfovibrio liaohensis"], [24970121, "PRJNA763243_P_NODE_49520_length_255_cov_2.318681_g49174_i0", "PRJNA763243", "49520", "255", "2.318681", "5.91263655", "Desulfovibrio sp. OttesenSCG-928-M16", "2885171", "Bacteria", "Bacteria", "152", "2.34e-42", "", "NR", "MDL2207175.1", "2885171", "g49174", "i0", "94", "0.988235294117647", "84", "5", "98.8", "0", "252", "1", "349", "432", "MDL2207175.1 glycine reductase complex selenoprotein B [Desulfovibrio sp. OttesenSCG-928-M16]", "diamond", "252", "152", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio sp. OttesenSCG-928-M16"], [27874424, "PRJNA763243_P_NODE_59225_length_244_cov_4.391813_g58879_i0", "PRJNA763243", "59225", "244", "4.391813", "10.71602372", "Desulfobacteraceae bacterium 4572_187", "1971620", "Bacteria", "Bacteria", "119", "3.21e-29", "", "NR", "OQY09318.1", "1971620", "g58879", "i0", "70.5", "1.93032786885246", "78", "23", "95.9", "0", "4", "237", "898", "975", "OQY09318.1 MAG: histidine kinase [Desulfobacteraceae bacterium 4572_187]", "diamond", "471", "119", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium 4572_187"], [28758453, "PRJNA763243_P_NODE_2787_length_803_cov_10.583562_g2522_i0", "PRJNA763243", "2787", "803", "10.583562", "84.98600286", "Desulfobacterales bacterium", "2044940", "Bacteria", "Bacteria", "60.8", "5.89e-7", "", "NR", "PID74746.1", "2044940", "g2522", "i0", "47.7", "1.18804483188045", "65", "33", "24.3", "1", "9", "203", "156", "219", "PID74746.1 MAG: hypothetical protein CSB28_01595 [Desulfobacterales bacterium]", "diamond", "954", "60.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", null, null, "Desulfobacterales bacterium"], [28957818, "PRJNA763243_P_NODE_10488_length_465_cov_1.719388_g10145_i0", "PRJNA763243", "10488", "465", "1.719388", "7.9951542", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "177", "4.6399999999999994e-48", "", "NR", "OQY09318.1", "1971620", "g10145", "i0", "56.1", "2.9741935483871", "157", "66", "99.4", "1", "462", "1", "740", "896", "OQY09318.1 MAG: histidine kinase [Desulfobacteraceae bacterium 4572_187]", "diamond", "1383", "177", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium 4572_187"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA763243", "p1": "Thermodesulfobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "PRJNA763243", "label": "PRJNA763243", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "blastn", "label": "blastn", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA763243&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Thermodesulfobacteriota", "label": "Thermodesulfobacteriota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA763243", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 339.49549798853695}