{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA753704\", tax_clade = \"FCB group\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[1202076, "PRJNA753704_P_NODE_741_length_1234_cov_8.730405_g524_i0", "PRJNA753704", "741", "1234", "8.730405", "107.7331977", "Gemmatimonas", "173479", "Bacteria", "Bacteria", "2052", "0", "", "NTclustered", "gi|470475286|ref|NR_076270.1|", "173480", "g524", "i0", "96.677", "223.22528363047", "1234", "41", "100", "0", "1", "1234", "1712", "479", "Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence", "blastn", "275460", "2052", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [2007142, "PRJNA753704_P_NODE_27922_length_243_cov_0.917647_g27561_i0", "PRJNA753704", "27922", "243", "0.917647", "2.22988221", "Gemmatimonas aurantiaca", "173480", "Bacteria", "Bacteria", "355", "1.49e-93", "", "NTclustered", "gi|226088597|dbj|AP009153.1|", "379066", "g27561", "i0", "93.004", "7.05349794238683", "243", "17", "100", "0", "1", "243", "2062070", "2062312", "Gemmatimonas aurantiaca T-27 DNA, complete genome", "blastn", "1714", "355", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [5834535, "PRJNA753704_P_NODE_12905_length_331_cov_2.244186_g12544_i0", "PRJNA753704", "12905", "331", "2.244186", "7.42825566", "Gemmatimonas phototrophica", "1379270", "Bacteria", "Bacteria", "479", "1.2099999999999996e-130", "", "NTclustered", "gi|1015602748|gb|CP011454.1|", "1379270", "g12544", "i0", "93.009", "152.398791540786", "329", "21", "99", "2", "1", "328", "2075175", "2074848", "Gemmatimonas phototrophica strain AP64, complete genome", "blastn", "50444", "479", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas phototrophica"], [12210430, "PRJNA753704_P_NODE_12590_length_335_cov_1.309160_g12229_i0", "PRJNA753704", "12590", "335", "1.30916", "4.385686", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "150", "5.99e-40", "", "NR", "RMH73596.1", "2026742", "g12229", "i0", "61.3", "0.994029850746269", "111", "42", "99.4", "1", "334", "2", "323", "432", "RMH73596.1 MAG: hypothetical protein D6675_02145, partial [Gemmatimonadota bacterium]", "diamond", "333", "150", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [12681702, "PRJNA753704_P_NODE_21290_length_264_cov_2.157068_g20929_i0", "PRJNA753704", "21290", "264", "2.157068", "5.69465952", "Gemmatimonas", "173479", "Bacteria", "Bacteria", "289", "1.69e-73", "", "NTclustered", "gi|226088597|dbj|AP009153.1|", "379066", "g20929", "i0", "86.466", "52.8939393939394", "266", "32", "100", "4", "1", "264", "4385", "4122", "Gemmatimonas aurantiaca T-27 DNA, complete genome", "blastn", "13964", "289", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatimonas", "Gemmatimonas aurantiaca"], [27157216, "PRJNA753704_P_NODE_24662_length_250_cov_1.491525_g24301_i0", "PRJNA753704", "24662", "250", "1.491525", "3.7288125", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "53.1", "6.62e-6", "", "NR", "MFN0099432.1", "2026741", "g24301", "i0", "73.5", "1.524", "34", "9", "40.8", "0", "104", "3", "9", "42", "MFN0099432.1 SDR family oxidoreductase [Gemmatimonadaceae bacterium]", "diamond", "381", "53.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [28925853, "PRJNA753704_P_NODE_24608_length_250_cov_1.762712_g24247_i0", "PRJNA753704", "24608", "250", "1.762712", "4.40678", "Bacteria", "2", "Bacteria", "Bacteria", "50.1", "7.45e-5", "", "NR", "MCA9751700.1", "2026742", "g24247", "i0", "50", "1.596", "60", "26", "67.2", "1", "168", "1", "9", "68", "MCA9751700.1 thioredoxin family protein [Gemmatimonadota bacterium]", "diamond", "399", "50.4", "0.994047619047619", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [30505169, "PRJNA753704_P_NODE_26333_length_246_cov_2.265896_g25972_i0", "PRJNA753704", "26333", "246", "2.265896", "5.57410416", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "62.8", "3.3e-9", "", "NR", "UCF20388.1", "2026742", "g25972", "i0", "40.5", "3.39024390243902", "74", "43", "90.2", "1", "235", "14", "18", "90", "UCF20388.1 MAG: AMP-binding protein [Gemmatimonadota bacterium]", "diamond", "834", "62.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [32771021, "PRJNA753704_P_NODE_19200_length_277_cov_1.294118_g18839_i0", "PRJNA753704", "19200", "277", "1.294118", "3.58470686", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "99.4", "6.91e-22", "", "NR", "MBK8246466.1", "2026742", "g18839", "i0", "84.8", "2.15523465703971", "66", "10", "71.5", "0", "6", "203", "386", "451", "MBK8246466.1 hypothetical protein [Gemmatimonadota bacterium]", "diamond", "597", "99.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA753704", "p1": "FCB group", "p2": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA753704", "label": "PRJNA753704", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA753704&tax_clade=FCB+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 447.4533649990917}