{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA745553\" and tax_phylum = \"Bdellovibrionota\"", "rows": [[5827672, "PRJNA745553_S_NODE_14085_length_328_cov_2.152941_g13890_i0", "PRJNA745553", "14085", "328", "2.152941", "7.06164648", "Bdellovibrio sp. HCB337", "3394358", "Bacteria", "Bacteria", "224", "6.179999999999998e-54", "", "NTclustered", "gi|2895525383|gb|CP178621.1|", "3394358", "g13890", "i0", "79.937", "258.164634146341", "319", "53", "95", "9", "17", "328", "3448035", "3448349", "Bdellovibrio sp. HCB337 chromosome, complete genome", "blastn", "84678", "224", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. HCB337"], [5827896, "PRJNA745553_S_NODE_25945_length_244_cov_2.274854_g25750_i0", "PRJNA745553", "25945", "244", "2.274854", "5.55064376", "uncultured Oligoflexales bacterium", "2735263", "Bacteria", "Bacteria", "148", "2.7299999999999997e-31", "", "NTclustered", "gi|2531963191|emb|OY282434.1|", "2735263", "g25750", "i0", "83.537", "105.204918032787", "164", "22", "66", "5", "21", "180", "954538", "954700", "MAG: uncultured Oligoflexales bacterium genome assembly, chromosome: 1", "blastn", "25670", "148", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", null, null, "uncultured Oligoflexales bacterium"], [8377491, "PRJNA745553_S_NODE_18347_length_288_cov_4.609302_g18152_i0", "PRJNA745553", "18347", "288", "4.609302", "13.27478976", "Peredibacter sp. HCB2-198", "3383025", "Bacteria", "Bacteria", "359", "1.4e-94", "", "NTclustered", "gi|2867657404|gb|CP174607.1|", "3383025", "g18152", "i0", "95.928", "59.1597222222222", "221", "9", "77", "0", "21", "241", "1292539", "1292759", "Peredibacter sp. HCB2-198 chromosome, complete genome", "blastn", "17038", "359", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter sp. HCB2-198"], [9652834, "PRJNA745553_S_NODE_4708_length_514_cov_3.038549_g4517_i0", "PRJNA745553", "4708", "514", "3.038549", "15.61814186", "Peredibacter sp. HCB2-198", "3383025", "Bacteria", "Bacteria", "675", "0", "", "NTclustered", "gi|2867657404|gb|CP174607.1|", "3383025", "g4517", "i0", "91.147", "122.570038910506", "497", "44", "97", "0", "10", "506", "1292276", "1292772", "Peredibacter sp. HCB2-198 chromosome, complete genome", "blastn", "63001", "675", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter sp. HCB2-198"], [10927967, "PRJNA745553_S_NODE_10049_length_382_cov_5.190939_g9854_i0", "PRJNA745553", "10049", "382", "5.190939", "19.82938698", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "322", "2.51e-83", "", "NTclustered", "gi|2556916994|gb|CP129486.1|", "3034175", "g9854", "i0", "83.014", "169.523560209424", "365", "52", "94", "9", "5", "362", "469192", "469553", "MAG: Bdellovibrionota bacterium isolate cMAG.10 chromosome, complete genome", "blastn", "64758", "322", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [12678288, "PRJNA745553_S_NODE_23010_length_258_cov_1.562162_g22815_i0", "PRJNA745553", "23010", "258", "1.562162", "4.03037796", "Peredibacter", "263370", "Bacteria", "Bacteria", "451", "1.98e-122", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g22815", "i0", "98.444", "250.027131782946", "257", "3", "99", "1", "2", "258", "512012", "511757", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "64507", "451", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [13478205, "PRJNA745553_S_NODE_4611_length_518_cov_11.907865_g4421_i0", "PRJNA745553", "4611", "518", "11.907865", "61.6827407", "Peredibacter starrii", "28202", "Bacteria", "Bacteria", "717", "0", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g4421", "i0", "92.742", "100.667953667954", "496", "36", "96", "0", "2", "497", "511179", "510684", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "52146", "717", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [13478287, "PRJNA745553_S_NODE_8551_length_411_cov_5.352071_g8356_i0", "PRJNA745553", "8551", "411", "5.352071", "21.99701181", "Micavibrio aeruginosavorus", "349221", "Bacteria", "Bacteria", "364", "4.469999999999999e-96", "", "NTclustered", "gi|1950812799|gb|CP066681.1|", "349221", "g8356", "i0", "84.01", "254.360097323601", "394", "48", "94", "15", "15", "400", "659521", "659907", "Micavibrio aeruginosavorus isolate NC_groundwater_70_Ag_B-0.1um_54_66 chromosome", "blastn", "104542", "364", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Micavibrio", "Micavibrio aeruginosavorus"], [24150265, "PRJNA745553_S_NODE_17839_length_292_cov_3.232877_g17644_i0", "PRJNA745553", "17839", "292", "3.232877", "9.44000084", "Pseudobdellovibrionaceae", "213483", "Bacteria", "Bacteria", "335", "2.4e-87", "", "NTclustered", "gi|507148233|ref|NR_103040.1|", "453816", "g17644", "i0", "87.415", "219.880136986301", "294", "34", "100", "3", "1", "292", "2394", "2102", "Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence", "blastn", "64205", "335", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Pseudobdellovibrio", "Pseudobdellovibrio exovorus"], [26799517, "PRJNA745553_S_NODE_24681_length_249_cov_4.602273_g24486_i0", "PRJNA745553", "24681", "249", "4.602273", "11.45965977", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "104", "2.81e-26", "", "NR", "HEY8279091.1", "3034175", "g24486", "i0", "70.6", "0.819277108433735", "68", "20", "81.9", "0", "223", "20", "33", "100", "HEY8279091.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Bdellovibrionota bacterium]", "diamond", "204", "104", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [27526691, "PRJNA745553_S_NODE_18443_length_287_cov_5.037383_g18248_i0", "PRJNA745553", "18443", "287", "5.037383", "14.45728921", "Oligoflexus sp.", "1971216", "Bacteria", "Bacteria", "89", "1.61e-19", "", "NR", "WP_324958659.1", "1971216", "g18248", "i0", "54.6", "1.01393728222997", "97", "28", "84.7", "2", "245", "3", "16", "112", "WP_324958659.1 hypothetical protein [Oligoflexus sp.]", "diamond", "291", "89", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", "Oligoflexaceae", "Oligoflexus", "Oligoflexus sp."], [27590029, "PRJNA745553_S_NODE_17144_length_298_cov_3.333333_g16949_i0", "PRJNA745553", "17144", "298", "3.333333", "9.93333234", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "71.6", "5.23e-12", "", "NR", "MBX3023134.1", "2053517", "g16949", "i0", "41.5", "0.825503355704698", "82", "45", "81.5", "2", "286", "44", "206", "285", "MBX3023134.1 hypothetical protein [Bdellovibrionales bacterium]", "diamond", "246", "71.6", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [27653156, "PRJNA745553_S_NODE_28724_length_227_cov_6.597403_g28529_i0", "PRJNA745553", "28724", "227", "6.597403", "14.97610481", "Micavibrio sp.", "2024841", "Bacteria", "Bacteria", "94", "2.6199999999999998e-23", "", "NR", "HEY8189317.1", "2024841", "g28529", "i0", "68.3", "3.87224669603524", "60", "19", "79.3", "0", "48", "227", "1", "60", "HEY8189317.1 CsbD family protein [Micavibrio sp.]", "diamond", "879", "94", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Micavibrio", "Micavibrio sp."], [32171039, "PRJNA745553_S_NODE_26518_length_242_cov_1.366864_g26323_i0", "PRJNA745553", "26518", "242", "1.366864", "3.30781088", "Pseudobdellovibrionaceae bacterium", "2026715", "Bacteria", "Bacteria", "82.8", "5.05e-18", "", "NR", "NJM09770.1", "2026715", "g26323", "i0", "56.1", "0.818181818181818", "66", "29", "81.8", "0", "25", "222", "59", "124", "NJM09770.1 riboflavin synthase [Pseudobdellovibrionaceae bacterium]", "diamond", "198", "82.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", null, "Pseudobdellovibrionaceae bacterium"], [32392301, "PRJNA745553_S_NODE_19919_length_277_cov_1.887255_g19724_i0", "PRJNA745553", "19919", "277", "1.887255", "5.22769635", "Oligoflexus sp.", "1971216", "Bacteria", "Bacteria", "66.6", "1.16e-11", "", "NR", "WP_324954830.1", "1971216", "g19724", "i0", "58", "1.50541516245487", "69", "28", "74.7", "1", "253", "47", "51", "118", "WP_324954830.1 preprotein translocase subunit SecG [Oligoflexus sp.]", "diamond", "417", "66.6", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", "Oligoflexaceae", "Oligoflexus", "Oligoflexus sp."], [32875327, "PRJNA745553_S_NODE_7000_length_447_cov_1.483957_g6806_i0", "PRJNA745553", "7000", "447", "1.483957", "6.63328779", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "172", "2.18e-51", "", "NR", "MBL7714230.1", "2053517", "g6806", "i0", "77.1", "2.40268456375839", "118", "26", "79.2", "1", "94", "447", "2", "118", "MBL7714230.1 NAD(P)-binding domain-containing protein [Bdellovibrionales bacterium]", "diamond", "1074", "172", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA745553", "p1": "Bdellovibrionota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota", "results": [{"value": "PRJNA745553", "label": "PRJNA745553", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota", "results": [{"value": "blastn", "label": "blastn", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA745553&tax_phylum=Bdellovibrionota", "results": [{"value": "Bdellovibrionota", "label": "Bdellovibrionota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA745553", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 316.28739900043}