{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA741997\" and tax_phylum = \"Spirochaetota\"", "rows": [[7100349, "PRJNA741997_P_NODE_74066_length_250_cov_0.870056_g72946_i0", "PRJNA741997", "74066", "250", "0.870056", "2.17514", "Treponema socranskii", "53419", "Bacteria", "Bacteria", "392", "1.1699999999999999e-104", "", "NTclustered", "gi|2265187740|gb|CP054258.1|", "69713", "g72946", "i0", "95.161", "2.976", "248", "12", "99", "0", "3", "250", "2418307", "2418060", "Treponema socranskii subsp. buccale strain ATCC 35534 chromosome, complete genome", "blastn", "744", "392", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema socranskii"], [26767764, "PRJNA741997_P_NODE_80761_length_246_cov_0.890173_g79641_i0", "PRJNA741997", "80761", "246", "0.890173", "2.18982558", "Spirochaetia bacterium", "2053615", "Bacteria", "Bacteria", "44.3", "0.0108", "", "NR", "MFO8063133.1", "2053615", "g79641", "i0", "37.2", "1.14634146341463", "94", "34", "84.1", "4", "20", "226", "111", "204", "MFO8063133.1 citramalate synthase [Spirochaetia bacterium]", "diamond", "282", "44.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", null, null, null, "Spirochaetia bacterium"], [27188904, "PRJNA741997_P_NODE_20342_length_508_cov_1.593103_g19227_i0", "PRJNA741997", "20342", "508", "1.593103", "8.09296324", "Bacteria", "2", "Bacteria", "Bacteria", "108", "6.1e-26", "", "NR", "WP_304243006.1", "215591", "g19227", "i0", "42.4", "11.8877952755906", "132", "70", "78", "2", "2", "397", "92", "217", "WP_304243006.1 CAP domain-containing protein [Gracilinema caldarium]", "diamond", "6039", "109", "0.990825688073395", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Breznakiellaceae", "Gracilinema", "Gracilinema caldarium"], [27188917, "PRJNA741997_P_NODE_75742_length_249_cov_0.875000_g74622_i0", "PRJNA741997", "75742", "249", "0.875", "2.17875", "Spirochaetales", "136", "Bacteria", "Bacteria", "90.9", "2.23e-19", "", "NR", "MDR1636004.1", "166", "g74622", "i0", "58.6", "6.20481927710843", "70", "28", "84.3", "1", "210", "1", "63", "131", "MDR1636004.1 NAD-dependent malic enzyme [Treponema sp.]", "diamond", "1545", "91.7", "0.991275899672846", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [27252233, "PRJNA741997_P_NODE_32883_length_380_cov_1.003257_g31763_i0", "PRJNA741997", "32883", "380", "1.003257", "3.8123766", "Cyanobacteriota/Melainabacteria group", "1798711", "Bacteria", "Bacteria", "58.9", "2.26e-7", "", "NR", "MEE0352004.1", "166", "g31763", "i0", "36.9", "2.77894736842105", "122", "70", "96.3", "4", "9", "374", "124", "238", "MEE0352004.1 CAP domain-containing protein [Treponema sp.]", "diamond", "1056", "58.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [27347306, "PRJNA741997_P_NODE_80363_length_246_cov_1.335260_g79243_i0", "PRJNA741997", "80363", "246", "1.33526", "3.2847396", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "63.9", "1.31e-9", "", "NR", "MCB1173069.1", "2026757", "g79243", "i0", "40.5", "1.86585365853659", "79", "45", "93.9", "1", "16", "246", "317", "395", "MCB1173069.1 ion transporter [Leptospiraceae bacterium]", "diamond", "459", "63.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", null, "Leptospiraceae bacterium"], [27652964, "PRJNA741997_P_NODE_66464_length_263_cov_1.215789_g65344_i0", "PRJNA741997", "66464", "263", "1.215789", "3.19752507", "Spirochaetes bacterium RIFOXYC1_FULL_54_7", "1802198", "Bacteria", "Bacteria", "84.7", "5.94e-17", "", "NR", "OHD82390.1", "1802198", "g65344", "i0", "48.2", "4.84790874524715", "85", "44", "97", "0", "256", "2", "307", "391", "OHD82390.1 MAG: hypothetical protein A3J97_09330 [Spirochaetes bacterium RIFOXYC1_FULL_54_7]", "diamond", "1275", "84.7", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetes bacterium RIFOXYC1_FULL_54_7"], [27684724, "PRJNA741997_P_NODE_60644_length_276_cov_1.517241_g59524_i0", "PRJNA741997", "60644", "276", "1.517241", "4.18758516", "Spirochaetes bacterium RBG_16_67_19", "1802196", "Bacteria", "Bacteria", "69.3", "2.41e-11", "", "NR", "OHD76513.1", "1802196", "g59524", "i0", "42", "5.79347826086957", "88", "51", "95.7", "0", "1", "264", "334", "421", "OHD76513.1 MAG: hypothetical protein A2V99_04525 [Spirochaetes bacterium RBG_16_67_19]", "diamond", "1599", "69.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetes bacterium RBG_16_67_19"], [27779215, "PRJNA741997_P_NODE_36284_length_360_cov_2.386760_g35164_i0", "PRJNA741997", "36284", "360", "2.38676", "8.592336", "Leptospiraceae bacterium", "2026757", "Bacteria", "Bacteria", "48.5", "6.87e-5", "", "NR", "MCB1177358.1", "2026757", "g35164", "i0", "41.5", "0.441666666666667", "53", "29", "42.5", "1", "161", "9", "1", "53", "MCB1177358.1 hypothetical protein [Leptospiraceae bacterium]", "diamond", "159", "48.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", null, "Leptospiraceae bacterium"], [27978610, "PRJNA741997_P_NODE_88945_length_241_cov_0.916667_g87825_i0", "PRJNA741997", "88945", "241", "0.916667", "2.20916747", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "90.5", "7.580000000000001e-21", "", "NR", "NNM66752.1", "2026792", "g87825", "i0", "50", "3.89626556016598", "78", "39", "97.1", "0", "5", "238", "74", "151", "NNM66752.1 isoprenylcysteine carboxylmethyltransferase family protein [Spirochaetales bacterium]", "diamond", "939", "90.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [28262646, "PRJNA741997_P_NODE_57746_length_283_cov_1.128571_g56626_i0", "PRJNA741997", "57746", "283", "1.128571", "3.19385593", "Cyanobacteriota/Melainabacteria group", "1798711", "Bacteria", "Bacteria", "75.5", "1.86e-13", "", "NR", "MCZ8156159.1", "178", "g56626", "i0", "44.1", "5.9469964664311", "93", "51", "97.5", "1", "4", "279", "543", "635", "MCZ8156159.1 guanylate cyclase [Leptospira sp.]", "diamond", "1683", "75.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira sp."], [28694941, "PRJNA741997_P_NODE_34267_length_371_cov_1.808725_g33147_i0", "PRJNA741997", "34267", "371", "1.808725", "6.71036975", "Spirochaetales bacterium", "2026792", "Bacteria", "Bacteria", "70.9", "6.27e-12", "", "NR", "MBN2874962.1", "2026792", "g33147", "i0", "39.6", "1.8355795148248", "111", "62", "89.8", "2", "371", "39", "109", "214", "MBN2874962.1 CAP domain-containing protein [Spirochaetales bacterium]", "diamond", "681", "70.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [28704954, "PRJNA741997_P_NODE_4647_length_1280_cov_3.833471_g4057_i0", "PRJNA741997", "4647", "1280", "3.833471", "49.0684288", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "83.6", "4.8e-14", "", "NR", "MDR2632347.1", "166", "g4057", "i0", "27.5", "1.77421875", "193", "116", "41.5", "5", "45", "575", "80", "264", "MDR2632347.1 CAP domain-containing protein [Treponema sp.]", "diamond", "2271", "84", "0.995238095238095", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [28757787, "PRJNA741997_P_NODE_30727_length_394_cov_3.146417_g29607_i0", "PRJNA741997", "30727", "394", "3.146417", "12.396882980000001", "Spirochaetes bacterium GWB1_59_5", "1802176", "Bacteria", "Bacteria", "58.2", "2.84e-7", "", "NR", "OHD18884.1", "1802176", "g29607", "i0", "37.3", "1.91878172588832", "118", "64", "82.2", "2", "21", "344", "14", "131", "OHD18884.1 MAG: hypothetical protein A2Y38_14560 [Spirochaetes bacterium GWB1_59_5]", "diamond", "756", "58.2", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetes bacterium GWB1_59_5"], [28789317, "PRJNA741997_P_NODE_83527_length_244_cov_1.801170_g82407_i0", "PRJNA741997", "83527", "244", "1.80117", "4.3948548", "Leptospira santarosai", "28183", "Bacteria", "Bacteria", "42.4", "0.0498", "", "NR", "WP_282970977.1", "28183", "g82407", "i0", "42.3", "0.639344262295082", "52", "29", "62.7", "1", "170", "18", "260", "311", "WP_282970977.1 phage tail protein [Leptospira santarosai]", "diamond", "156", "42.4", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira santarosai"], [28852370, "PRJNA741997_P_NODE_26208_length_433_cov_1.497222_g25088_i0", "PRJNA741997", "26208", "433", "1.497222", "6.48297126", "Leptospira sp.", "178", "Bacteria", "Bacteria", "150", "1.5399999999999999e-43", "", "NR", "MCU0824711.1", "178", "g25088", "i0", "58.9", "0.859122401847575", "124", "51", "85.9", "0", "372", "1", "1", "124", "MCU0824711.1 MFS transporter [Leptospira sp.]", "diamond", "372", "150", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira sp."], [28884096, "PRJNA741997_P_NODE_45968_length_320_cov_1.145749_g44848_i0", "PRJNA741997", "45968", "320", "1.145749", "3.6663968", "Leptospira perolatii", "2023191", "Bacteria", "Bacteria", "75.9", "1.96e-13", "", "NR", "WP_100714444.1", "2023191", "g44848", "i0", "36.8", "0.815625", "87", "55", "81.6", "0", "30", "290", "183", "269", "WP_100714444.1 ion transporter [Leptospira perolatii]", "diamond", "261", "75.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira perolatii"], [29714878, "PRJNA741997_P_NODE_53030_length_295_cov_1.040541_g51910_i0", "PRJNA741997", "53030", "295", "1.040541", "3.06959595", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "92.4", "2.44e-19", "", "NR", "WP_100786390.1", "2023186", "g51910", "i0", "48.5", "6.86440677966102", "97", "50", "98.6", "0", "292", "2", "303", "399", "WP_100786390.1 PAS domain S-box protein [Leptospira adleri]", "diamond", "2025", "93.2", "0.991416309012876", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira adleri"], [30210321, "PRJNA741997_P_NODE_88652_length_241_cov_1.636905_g87532_i0", "PRJNA741997", "88652", "241", "1.636905", "3.94494105", "Spirochaetaceae bacterium", "1898206", "Bacteria", "Bacteria", "52", "2.04e-5", "", "NR", "MDR2481964.1", "1898206", "g87532", "i0", "36.4", "0.821576763485477", "66", "42", "82.2", "0", "4", "201", "323", "388", "MDR2481964.1 ankyrin repeat domain-containing protein [Spirochaetaceae bacterium]", "diamond", "198", "52", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Spirochaetaceae", null, "Spirochaetaceae bacterium"], [30631226, "PRJNA741997_P_NODE_69353_length_256_cov_1.584699_g68233_i0", "PRJNA741997", "69353", "256", "1.584699", "4.05682944", "Bacteria", "2", "Bacteria", "Bacteria", "58.9", "8.7e-8", "", "NR", "WP_255822795.1", "221027", "g68233", "i0", "37.7", "9.26953125", "69", "43", "80.9", "0", "13", "219", "319", "387", "WP_255822795.1 ABC transporter ATP-binding protein [Treponema putidum]", "diamond", "2373", "58.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema putidum"], [30684306, "PRJNA741997_P_NODE_48453_length_311_cov_0.957983_g47333_i0", "PRJNA741997", "48453", "311", "0.957983", "2.97932713", "Sphaerochaetaceae bacterium", "2791017", "Bacteria", "Bacteria", "82.8", "9.64e-17", "", "NR", "MCY1151088.1", "2791017", "g47333", "i0", "49", "0.983922829581994", "102", "48", "98.4", "1", "308", "3", "50", "147", "MCY1151088.1 SIMPL domain-containing protein [Sphaerochaetaceae bacterium]", "diamond", "306", "82.8", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Sphaerochaetaceae", null, "Sphaerochaetaceae bacterium"], [30968990, "PRJNA741997_P_NODE_53914_length_292_cov_1.054795_g52794_i0", "PRJNA741997", "53914", "292", "1.054795", "3.0800014", "Leptospira ainlahdjerensis", "2810033", "Bacteria", "Bacteria", "58.2", "1.89e-7", "", "NR", "WP_205280276.1", "2810033", "g52794", "i0", "48.3", "1.84931506849315", "60", "31", "61.6", "0", "193", "14", "96", "155", "WP_205280276.1 hypothetical protein [Leptospira ainlahdjerensis]", "diamond", "540", "58.2", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira ainlahdjerensis"], [31538069, "PRJNA741997_P_NODE_61256_length_275_cov_1.331683_g60136_i0", "PRJNA741997", "61256", "275", "1.331683", "3.66212825", "Spirochaetales bacterium", "2026792", "Bacteria", "Bacteria", "117", "1.13e-29", "", "NR", "MDC7239990.1", "2026792", "g60136", "i0", "58.2", "0.992727272727273", "91", "38", "99.3", "0", "275", "3", "126", "216", "MDC7239990.1 NAD(P)-dependent oxidoreductase [Spirochaetales bacterium]", "diamond", "273", "117", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [31790722, "PRJNA741997_P_NODE_20597_length_504_cov_1.429234_g19481_i0", "PRJNA741997", "20597", "504", "1.429234", "7.20333936", "Leptospiraceae bacterium", "2026757", "Bacteria", "Bacteria", "66.2", "2.48e-9", "", "NR", "MCB1190498.1", "2026757", "g19481", "i0", "32.9", "0.976190476190476", "164", "102", "97", "6", "495", "7", "147", "303", "MCB1190498.1 CAP domain-containing protein [Leptospiraceae bacterium]", "diamond", "492", "66.2", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", null, "Leptospiraceae bacterium"], [32307611, "PRJNA741997_P_NODE_84979_length_244_cov_0.900585_g83859_i0", "PRJNA741997", "84979", "244", "0.900585", "2.1974274", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "48.1", "4.83e-4", "", "NR", "HOV94740.1", "2026792", "g83859", "i0", "51.1", "4.11885245901639", "45", "22", "55.3", "0", "244", "110", "881", "925", "HOV94740.1 ankyrin repeat domain-containing protein [Spirochaetales bacterium]", "diamond", "1005", "48.1", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [32644498, "PRJNA741997_P_NODE_35680_length_363_cov_4.555172_g34560_i0", "PRJNA741997", "35680", "363", "4.555172", "16.53527436", "Leptospiraceae bacterium", "2026757", "Bacteria", "Bacteria", "66.6", "6.02e-12", "", "NR", "MCB1177358.1", "2026757", "g34560", "i0", "49.1", "0.43801652892562", "53", "25", "42.1", "1", "164", "12", "1", "53", "MCB1177358.1 hypothetical protein [Leptospiraceae bacterium]", "diamond", "159", "66.6", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", null, "Leptospiraceae bacterium"]], "truncated": false, "filtered_table_rows_count": 26, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA741997", "p1": "Spirochaetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota", "results": [{"value": "PRJNA741997", "label": "PRJNA741997", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota", "results": [{"value": "diamond", "label": "diamond", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA741997&tax_phylum=Spirochaetota", "results": [{"value": "Spirochaetota", "label": "Spirochaetota", "count": 26, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA741997", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 274.16834099858534}