{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA719595\" and tax_phylum = \"Gemmatimonadota\"", "rows": [[5813064, "PRJNA719595_P_NODE_7745_length_248_cov_0.891429_g7710_i0", "PRJNA719595", "7745", "248", "0.891429", "2.21074392", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "274", "4.399999999999999e-69", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g7710", "i0", "86.992", "0.991935483870968", "246", "28", "98", "4", "1", "244", "1513566", "1513323", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "246", "274", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [9637971, "PRJNA719595_P_NODE_7748_length_248_cov_0.891429_g7713_i0", "PRJNA719595", "7748", "248", "0.891429", "2.21074392", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "191", "4.56e-44", "", "NTclustered", "gi|2874253728|emb|OY969570.1|", "412054", "g7713", "i0", "82.727", "0.887096774193548", "220", "32", "88", "5", "32", "248", "5794446", "5794662", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1", "blastn", "220", "191", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [10913522, "PRJNA719595_P_NODE_9329_length_242_cov_0.923077_g9294_i0", "PRJNA719595", "9329", "242", "0.923077", "2.23384634", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "243", "1.2100000000000004e-59", "", "NTclustered", "gi|2874253728|emb|OY969570.1|", "412054", "g9294", "i0", "86.425", "4.97107438016529", "221", "30", "91", "0", "6", "226", "1306510", "1306730", "MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1", "blastn", "1203", "243", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [12188798, "PRJNA719595_P_NODE_9330_length_242_cov_0.923077_g9295_i0", "PRJNA719595", "9330", "242", "0.923077", "2.23384634", "FCB group", "1783270", "Bacteria", "Bacteria", "100", "1.27e-22", "", "NR", "HEV8400734.1", "2448054", "g9295", "i0", "66.7", "4.52479338842975", "72", "24", "89.3", "0", "23", "238", "558", "629", "HEV8400734.1 GNAT family N-acetyltransferase [Gemmatimonadales bacterium]", "diamond", "1095", "101", "0.99009900990099", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [13463202, "PRJNA719595_P_NODE_7351_length_250_cov_0.881356_g7316_i0", "PRJNA719595", "7351", "250", "0.881356", "2.20339", "FCB group", "1783270", "Bacteria", "Bacteria", "106", "1.53e-27", "", "NR", "MBA3585577.1", "2026742", "g7316", "i0", "92", "3.6", "50", "4", "60", "0", "101", "250", "1", "50", "MBA3585577.1 alpha/beta hydrolase [Gemmatimonadota bacterium]", "diamond", "900", "106", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [17287485, "PRJNA719595_P_NODE_6714_length_252_cov_0.871508_g6679_i0", "PRJNA719595", "6714", "252", "0.871508", "2.19620016", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "215", "2.75e-51", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g6679", "i0", "82.558", "1.02380952380952", "258", "31", "98", "7", "1", "247", "3599513", "3599767", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "258", "215", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [17287529, "PRJNA719595_P_NODE_8934_length_244_cov_0.912281_g8899_i0", "PRJNA719595", "8934", "244", "0.912281", "2.22596564", "Gemmatirosa kalamazoonensis", "861299", "Bacteria", "Bacteria", "254", "5.62e-63", "", "NTclustered", "gi|575456455|gb|CP007128.1|", "861299", "g8899", "i0", "85.833", "4.66393442622951", "240", "32", "98", "2", "5", "243", "543071", "542833", "Gemmatirosa kalamazoonesis strain KBS708, complete genome", "blastn", "1138", "254", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Gemmatirosa", "Gemmatirosa kalamazoonensis"], [19836427, "PRJNA719595_P_NODE_8856_length_244_cov_0.912281_g8821_i0", "PRJNA719595", "8856", "244", "0.912281", "2.22596564", "Pseudogemmatithrix", "3237678", "Bacteria", "Bacteria", "91.7", "1.63e-19", "", "NR", "MCC7003936.1", "2026741", "g8821", "i0", "77.8", "3.95901639344262", "54", "12", "66.4", "0", "83", "244", "1", "54", "MCC7003936.1 UDP-glucose/GDP-mannose dehydrogenase family protein [Gemmatimonadaceae bacterium]", "diamond", "966", "92.4", "0.992424242424242", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [21112076, "PRJNA719595_P_NODE_8057_length_247_cov_0.896552_g8022_i0", "PRJNA719595", "8057", "247", "0.896552", "2.21448344", "uncultured Gemmatimonadales bacterium", "412054", "Bacteria", "Bacteria", "303", "5.58e-78", "", "NTclustered", "gi|2874253978|emb|OY970303.1|", "412054", "g8022", "i0", "89.256", "10.9676113360324", "242", "26", "100", "0", "6", "247", "3077426", "3077667", "MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1", "blastn", "2709", "303", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "uncultured Gemmatimonadales bacterium"], [28504778, "PRJNA719595_P_NODE_6587_length_253_cov_0.866667_g6552_i0", "PRJNA719595", "6587", "253", "0.866667", "2.19266751", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "99.8", "1.75e-22", "", "NR", "HSK20400.1", "2910168", "g6552", "i0", "65", "1.92094861660079", "80", "28", "94.9", "0", "253", "14", "301", "380", "HSK20400.1 mechanosensitive ion channel family protein [Longimicrobiales bacterium]", "diamond", "486", "99.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"], [28767798, "PRJNA719595_P_NODE_8507_length_246_cov_0.901734_g8472_i0", "PRJNA719595", "8507", "246", "0.901734", "2.21826564", "Roseisolibacter", "2093335", "Bacteria", "Bacteria", "113", "6.61e-27", "", "NR", "WP_284351320.1", "2014610", "g8472", "i0", "63.8", "2.95121951219512", "80", "29", "97.6", "0", "240", "1", "88", "167", "WP_284351320.1 ABC transporter permease [Roseisolibacter agri]", "diamond", "726", "113", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", "Roseisolibacter", "Roseisolibacter agri"], [28978553, "PRJNA719595_P_NODE_7788_length_248_cov_0.891429_g7753_i0", "PRJNA719595", "7788", "248", "0.891429", "2.21074392", "Gemmatimonadaceae bacterium", "2026741", "Bacteria", "Bacteria", "148", "3.46e-39", "", "NR", "HEX4682909.1", "2026741", "g7753", "i0", "87.8", "2.9758064516129", "82", "10", "99.2", "0", "246", "1", "852", "933", "HEX4682909.1 PDZ domain-containing protein [Gemmatimonadaceae bacterium]", "diamond", "738", "148", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", "Gemmatimonadaceae", null, "Gemmatimonadaceae bacterium"], [30431615, "PRJNA719595_P_NODE_6833_length_252_cov_0.871508_g6798_i0", "PRJNA719595", "6833", "252", "0.871508", "2.19620016", "Gemmatimonadales bacterium", "2448054", "Bacteria", "Bacteria", "173", "6.23e-50", "", "NR", "HVQ47397.1", "2448054", "g6798", "i0", "100", "24", "84", "0", "100", "0", "252", "1", "152", "235", "HVQ47397.1 serine/threonine-protein kinase [Gemmatimonadales bacterium]", "diamond", "6048", "173", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Gemmatimonadia", "Gemmatimonadales", null, null, "Gemmatimonadales bacterium"], [30747197, "PRJNA719595_P_NODE_8494_length_246_cov_0.901734_g8459_i0", "PRJNA719595", "8494", "246", "0.901734", "2.21826564", "Gemmatimonadota bacterium", "2026742", "Bacteria", "Bacteria", "85.9", "7.07e-18", "", "NR", "MDQ3997310.1", "2026742", "g8459", "i0", "58.4", "0.939024390243902", "77", "31", "93.9", "1", "232", "2", "2", "77", "MDQ3997310.1 hypothetical protein [Gemmatimonadota bacterium]", "diamond", "231", "85.9", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", null, null, null, null, "Gemmatimonadota bacterium"], [30999979, "PRJNA719595_P_NODE_8234_length_247_cov_0.896552_g8199_i0", "PRJNA719595", "8234", "247", "0.896552", "2.21448344", "Longimicrobiales bacterium", "2910168", "Bacteria", "Bacteria", "84.7", "6.57e-17", "", "NR", "HUP88371.1", "2910168", "g8199", "i0", "51.9", "1.97975708502024", "81", "39", "98.4", "0", "247", "5", "252", "332", "HUP88371.1 hypothetical protein [Longimicrobiales bacterium]", "diamond", "489", "84.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Gemmatimonadota", "Longimicrobiia", "Longimicrobiales", null, null, "Longimicrobiales bacterium"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA719595", "p1": "Gemmatimonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota", "results": [{"value": "PRJNA719595", "label": "PRJNA719595", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Gemmatimonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota", "results": [{"value": "FCB group", "label": "FCB group", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA719595&tax_phylum=Gemmatimonadota", "results": [{"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA719595", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 317.68664899573196}