{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA715462\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Bdellovibrionota\"", "rows": [[5809292, "PRJNA715462_P_NODE_26185_length_352_cov_0.824373_g25389_i0", "PRJNA715462", "26185", "352", "0.824373", "2.90179296", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "52.8", "0.033", "", "NTclustered", "gi|2626289182|emb|OY843585.1|", "2053517", "g25389", "i0", "100", "0.0795454545454545", "28", "0", "8", "0", "40", "67", "298368", "298341", "MAG: Bdellovibrionales bacterium isolate 022bb5af-5c53-4953-82b0-2ef8059d9f16 genome assembly, chromosome: 1", "blastn", "28", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [19044006, "PRJNA715462_P_NODE_29715_length_327_cov_2.421260_g28919_i0", "PRJNA715462", "29715", "327", "2.42126", "7.9175202", "Peredibacter", "263370", "Bacteria", "Bacteria", "544", "4.16e-150", "", "NTclustered", "gi|2631252187|gb|CP139487.1|", "28202", "g28919", "i0", "96.646", "211.079510703364", "328", "10", "100", "1", "1", "327", "511251", "511578", "Peredibacter starrii strain A3.12 chromosome, complete genome", "blastn", "69023", "549", "0.990892531876138", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Bacteriovoracaceae", "Peredibacter", "Peredibacter starrii"], [19833198, "PRJNA715462_P_NODE_57296_length_247_cov_1.770115_g56500_i0", "PRJNA715462", "57296", "247", "1.770115", "4.37218405", "Bdellovibrio sp. HCB117", "3394359", "Bacteria", "Bacteria", "198", "2.71e-46", "", "NTclustered", "gi|2895987660|gb|CP178622.1|", "3394359", "g56500", "i0", "81.481", "1.73279352226721", "243", "43", "98", "2", "6", "247", "2734488", "2734729", "Bdellovibrio sp. HCB117 chromosome, complete genome", "blastn", "428", "198", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. HCB117"], [26862422, "PRJNA715462_P_NODE_35001_length_299_cov_0.840708_g34205_i0", "PRJNA715462", "35001", "299", "0.840708", "2.51371692", "Pseudobdellovibrionaceae bacterium", "2026715", "Bacteria", "Bacteria", "44.3", "0.0197", "", "NR", "MBN22457.1", "2026715", "g34205", "i0", "37.7", "0.531772575250836", "53", "33", "53.2", "0", "108", "266", "335", "387", "MBN22457.1 AAA family ATPase [Pseudobdellovibrionaceae bacterium]", "diamond", "159", "44.3", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", null, "Pseudobdellovibrionaceae bacterium"], [27567927, "PRJNA715462_P_NODE_56184_length_248_cov_0.880000_g55388_i0", "PRJNA715462", "56184", "248", "0.88", "2.1824", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "53.1", "8.49e-6", "", "NR", "MBO9666903.1", "28201", "g55388", "i0", "42", "11.4314516129032", "81", "44", "98", "3", "248", "6", "373", "450", "MBO9666903.1 S9 family peptidase [Bdellovibrio sp.]", "diamond", "2835", "53.5", "0.992523364485981", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp."], [27873193, "PRJNA715462_P_NODE_62445_length_245_cov_0.895349_g61649_i0", "PRJNA715462", "62445", "245", "0.895349", "2.19360505", "Pseudobdellovibrio exovorus", "453816", "Bacteria", "Bacteria", "43.1", "0.0221", "", "NR", "WP_015470185.1", "453816", "g61649", "i0", "40", "0.73469387755102", "60", "36", "73.5", "0", "1", "180", "146", "205", "WP_015470185.1 HdeD family acid-resistance protein [Pseudobdellovibrio exovorus]", "diamond", "180", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Pseudobdellovibrio", "Pseudobdellovibrio exovorus"], [29514868, "PRJNA715462_P_NODE_46070_length_263_cov_1.247368_g45274_i0", "PRJNA715462", "46070", "263", "1.247368", "3.28057784", "Oligoflexia bacterium", "2599941", "Bacteria", "Bacteria", "63.5", "8.93e-10", "", "NR", "MDR3605782.1", "2599941", "g45274", "i0", "42.5", "0.992395437262357", "87", "38", "99.2", "1", "262", "2", "124", "198", "MDR3605782.1 SEC59/DGK1/VTE5 family protein [Oligoflexia bacterium]", "diamond", "261", "63.5", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", null, null, null, "Oligoflexia bacterium"], [29862393, "PRJNA715462_P_NODE_56871_length_248_cov_0.880000_g56075_i0", "PRJNA715462", "56871", "248", "0.88", "2.1824", "Bdellovibrio bacteriovorus", "959", "Bacteria", "Bacteria", "63.2", "6.17e-10", "", "NR", "WP_374080345.1", "959", "g56075", "i0", "44.2", "0.931451612903226", "77", "41", "91.9", "2", "246", "19", "79", "154", "WP_374080345.1 HEAT repeat domain-containing protein [Bdellovibrio bacteriovorus]", "diamond", "231", "63.2", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio bacteriovorus"], [31769171, "PRJNA715462_P_NODE_26237_length_351_cov_1.589928_g25441_i0", "PRJNA715462", "26237", "351", "1.589928", "5.58064728", "root", "1", "Root_unresolved", "Root_unresolved", "163", "3.58e-46", "", "NR", "MBC7743086.1", "28201", "g25441", "i0", "75", "9", "108", "27", "92.3", "0", "1", "324", "282", "389", "MBC7743086.1 cystathionine gamma-synthase [Bdellovibrio sp.]", "diamond", "3159", "164", "0.99390243902439", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp."], [32454979, "PRJNA715462_P_NODE_35579_length_296_cov_1.031390_g34783_i0", "PRJNA715462", "35579", "296", "1.03139", "3.0529144", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "46.6", "0.0021", "", "NR", "NQY99292.1", "2053517", "g34783", "i0", "47.6", "1.86486486486486", "42", "22", "42.6", "0", "244", "119", "162", "203", "NQY99292.1 50S ribosomal protein L4 [Bdellovibrionales bacterium]", "diamond", "552", "46.6", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA715462", "p1": "Pseudomonadati", "p2": "Bdellovibrionota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "PRJNA715462", "label": "PRJNA715462", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bdellovibrionota", "label": "Bdellovibrionota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA715462&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 466.1315979974461}