{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA700095\", tax_clade = \"Opisthokonta\" and tax_phylum = \"Nematoda\"", "rows": [[5786717, "PRJNA700095_P_NODE_39145_length_278_cov_1.453659_g37881_i0", "PRJNA700095", "39145", "278", "1.453659", "4.04117202", "Nematoda environmental sample", "554024", "Nematoda", "Nematoda", "472", "1.6599999999999998e-128", "", "NTclustered", "gi|2743156117|gb|PP910122.1|", "554024", "g37881", "i0", "97.802", "66.158273381295", "273", "6", "98", "0", "6", "278", "580", "308", "Nematoda environmental sample isolate SN_I large subunit ribosomal RNA gene, partial sequence", "blastn", "18392", "472", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", null, null, null, null, "Nematoda environmental sample"], [10887184, "PRJNA700095_P_NODE_20609_length_388_cov_1.587302_g19346_i0", "PRJNA700095", "20609", "388", "1.587302", "6.15873176", "Strongyloides ratti", "34506", "Nematoda", "Nematoda", "363", "1.51e-95", "", "NTclustered", "gi|1376148845|ref|XM_024642710.1|", "34506", "g19346", "i0", "84.658", "94.5309278350515", "365", "54", "94", "2", "25", "388", "1316", "953", "Strongyloides ratti Tubulin beta-2A chain (SRAE_2000390300), partial mRNA", "blastn", "36678", "363", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"], [12663766, "PRJNA700095_P_NODE_64730_length_241_cov_2.339286_g63466_i0", "PRJNA700095", "64730", "241", "2.339286", "5.63767926", "Metazoa", "33208", "Nematoda", "Nematoda", "73.1", "1.67e-8", "", "NTclustered", "gi|256251567|emb|FM207826.1|", "6313", "g63466", "i0", "80.645", "0.771784232365145", "93", "18", "39", "0", "148", "240", "434", "342", "Angiostrongylus cantonensis partial mRNA ORF1 for Putative protein, clone 00012D12", "blastn", "186", "73.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Metastrongylidae", "Angiostrongylus", "Angiostrongylus cantonensis"], [15985968, "PRJNA700095_P_NODE_70973_length_200_cov_5.874016_g69708_i0", "PRJNA700095", "70973", "200", "5.874016", "11.748032", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "52.8", "0.017", "", "NTclustered", "gi|690020769|emb|LM528349.1|", "174720", "g69708", "i0", "100", "0.14", "28", "0", "14", "0", "12", "39", "805", "832", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0002678", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [19810052, "PRJNA700095_P_NODE_24976_length_344_cov_1.701107_g23712_i0", "PRJNA700095", "24976", "344", "1.701107", "5.85180808", "Caenorhabditis elegans", "6239", "Nematoda", "Nematoda", "52.8", "0.033", "", "NTclustered", "gi|413006602|emb|Z83230.2|", "6239", "g23712", "i0", "100", "0.162790697674419", "28", "0", "8", "0", "87", "114", "2024", "1997", "Caenorhabditis elegans Cosmid F56A8, complete sequence", "blastn", "56", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis elegans"], [26619103, "PRJNA700095_P_NODE_51021_length_251_cov_1.719101_g49757_i0", "PRJNA700095", "51021", "251", "1.719101", "4.31494351", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "55.1", "1.66e-6", "", "NR", "VDM66424.1", "40348", "g49757", "i0", "60.4", "10.0996015936255", "48", "18", "57.4", "1", "107", "250", "6", "52", "VDM66424.1 unnamed protein product, partial [Strongylus vulgaris]", "diamond", "2535", "55.5", "0.992792792792793", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongylidae", "Strongylus", "Strongylus vulgaris"], [26650575, "PRJNA700095_P_NODE_23741_length_355_cov_1.354610_g22477_i0", "PRJNA700095", "23741", "355", "1.35461", "4.8088655", "Rhabditida", "6236", "Nematoda", "Nematoda", "142", "2.17e-36", "", "NR", "VDK44839.1", "6269", "g22477", "i0", "54.2", "4.98591549295775", "118", "53", "99.7", "1", "2", "355", "306", "422", "VDK44839.1 unnamed protein product [Anisakis simplex]", "diamond", "1770", "142", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Anisakidae", "Anisakis", "Anisakis simplex"], [26766270, "PRJNA700095_P_NODE_31781_length_303_cov_1.978261_g30517_i0", "PRJNA700095", "31781", "303", "1.978261", "5.99413083", "Cylicocyclus nassatus", "53992", "Nematoda", "Nematoda", "49.7", "2.81e-4", "", "NR", "CAJ0593761.1", "53992", "g30517", "i0", "40.3", "4.23762376237624", "62", "36", "60.4", "1", "112", "294", "60", "121", "CAJ0593761.1 unnamed protein product [Cylicocyclus nassatus]", "diamond", "1284", "49.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongylidae", "Cylicocyclus", "Cylicocyclus nassatus"], [26872762, "PRJNA700095_P_NODE_12161_length_548_cov_2.176842_g10911_i0", "PRJNA700095", "12161", "548", "2.176842", "11.92909416", "Metazoa", "33208", "Nematoda", "Nematoda", "154", "1.7e-39", "", "NR", "CAJ0573087.1", "96644", "g10911", "i0", "45.6", "16.0127737226277", "182", "88", "99.6", "5", "3", "548", "901", "1071", "CAJ0573087.1 unnamed protein product, partial [Mesorhabditis spiculigera]", "diamond", "8775", "155", "0.993548387096774", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Mesorhabditis", "Mesorhabditis spiculigera"], [27872419, "PRJNA700095_P_NODE_5225_length_864_cov_3.318584_g4227_i0", "PRJNA700095", "5225", "864", "3.318584", "28.67256576", "Mesorhabditis spiculigera", "96644", "Nematoda", "Nematoda", "221", "1.85e-61", "", "NR", "CAJ0585849.1", "96644", "g4227", "i0", "41.1", "8.32986111111111", "265", "127", "91.7", "4", "857", "66", "1218", "1454", "CAJ0585849.1 unnamed protein product, partial [Mesorhabditis spiculigera]", "diamond", "7197", "221", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Mesorhabditis", "Mesorhabditis spiculigera"], [28041550, "PRJNA700095_P_NODE_63385_length_242_cov_1.786982_g62121_i0", "PRJNA700095", "63385", "242", "1.786982", "4.32449644", "root", "1", "Root_unresolved", "Root_unresolved", "76.6", "3.64e-14", "", "NR", "KAI3410969.1", "36090", "g62121", "i0", "55", "4.97107438016529", "60", "27", "74.4", "0", "181", "2", "8", "67", "KAI3410969.1 hypothetical protein GPALN_003053 [Globodera pallida]", "diamond", "1203", "76.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Heteroderidae", "Globodera", "Globodera pallida"], [28282664, "PRJNA700095_P_NODE_28966_length_316_cov_1.263374_g27702_i0", "PRJNA700095", "28966", "316", "1.263374", "3.99226184", "Necator americanus", "51031", "Nematoda", "Nematoda", "48.9", "5.55e-4", "", "NR", "XP_013302916.2", "51031", "g27702", "i0", "39.1", "1.44303797468354", "64", "36", "59.8", "2", "277", "89", "179", "240", "XP_013302916.2 hypothetical protein RB195_002921 [Necator americanus]", "diamond", "456", "48.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Ancylostomatidae", "Necator", "Necator americanus"], [28452102, "PRJNA700095_P_NODE_17186_length_436_cov_2.377410_g15923_i0", "PRJNA700095", "17186", "436", "2.37741", "10.3655076", "Metazoa", "33208", "Nematoda", "Nematoda", "209", "1.99e-61", "", "NR", "ULT98270.1", "6238", "g15923", "i0", "65.1", "10.8371559633028", "146", "49", "99.1", "2", "1", "432", "444", "589", "ULT98270.1 hypothetical protein L3Y34_005821 [Caenorhabditis briggsae]", "diamond", "4725", "211", "0.990521327014218", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"], [28503883, "PRJNA700095_P_NODE_10227_length_608_cov_2.013084_g8993_i0", "PRJNA700095", "10227", "608", "2.013084", "12.23955072", "Onchocerca ochengi", "42157", "Nematoda", "Nematoda", "166", "5.289999999999999e-48", "", "NR", "VDN00135.1", "42157", "g8993", "i0", "73.6", "0.991776315789474", "201", "53", "99.2", "0", "5", "607", "5", "205", "VDN00135.1 unnamed protein product, partial [Onchocerca ochengi]", "diamond", "603", "166", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Onchocercidae", "Onchocerca", "Onchocerca ochengi"], [28724943, "PRJNA700095_P_NODE_27267_length_327_cov_1.574803_g26003_i0", "PRJNA700095", "27267", "327", "1.574803", "5.14960581", "Bursaphelenchus xylophilus", "6326", "Nematoda", "Nematoda", "43.9", "0.036", "", "NR", "CAD5231499.1", "6326", "g26003", "i0", "54.8", "0.284403669724771", "31", "14", "28.4", "0", "221", "129", "27", "57", "CAD5231499.1 unnamed protein product [Bursaphelenchus xylophilus]", "diamond", "93", "43.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Aphelenchoididae", "Bursaphelenchus", "Bursaphelenchus xylophilus"], [29020554, "PRJNA700095_P_NODE_13468_length_513_cov_2.213636_g12213_i0", "PRJNA700095", "13468", "513", "2.213636", "11.35595268", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "90.1", "1.09e-17", "", "NR", "XP_042929296.1", "6279", "g12213", "i0", "48.8", "5.39766081871345", "84", "43", "49.1", "0", "511", "260", "286", "369", "XP_042929296.1 splicing factor, CC1-like family protein [Brugia malayi]", "diamond", "2769", "90.9", "0.991199119911991", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Onchocercidae", "Brugia", "Brugia malayi"], [29798313, "PRJNA700095_P_NODE_10771_length_589_cov_2.639535_g9531_i0", "PRJNA700095", "10771", "589", "2.639535", "15.54686115", "Steinernema hermaphroditum", "289476", "Nematoda", "Nematoda", "78.6", "4.65e-13", "", "NR", "KAK0401820.1", "289476", "g9531", "i0", "34.1", "2.69949066213922", "132", "82", "65.2", "2", "585", "202", "961", "1091", "KAK0401820.1 hypothetical protein QR680_015990 [Steinernema hermaphroditum]", "diamond", "1590", "78.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Steinernematidae", "Steinernema", "Steinernema hermaphroditum"], [30841083, "PRJNA700095_P_NODE_16894_length_441_cov_1.024457_g15631_i0", "PRJNA700095", "16894", "441", "1.024457", "4.51785537", "Anisakis simplex", "6269", "Nematoda", "Nematoda", "70.5", "3.02e-11", "", "NR", "VDK58758.1", "6269", "g15631", "i0", "41.4", "0.938775510204082", "70", "41", "47.6", "0", "215", "424", "51", "120", "VDK58758.1 unnamed protein product [Anisakis simplex]", "diamond", "414", "70.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Anisakidae", "Anisakis", "Anisakis simplex"], [31979260, "PRJNA700095_P_NODE_16098_length_456_cov_1.344648_g14835_i0", "PRJNA700095", "16098", "456", "1.344648", "6.13159488", "Haemonchus placei", "6290", "Nematoda", "Nematoda", "120", "1.42e-30", "", "NR", "VDO43976.1", "6290", "g14835", "i0", "50.4", "81.7631578947368", "121", "49", "78.3", "2", "78", "434", "27", "138", "VDO43976.1 unnamed protein product [Haemonchus placei]", "diamond", "37284", "120", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Trichostrongylidae", "Haemonchus", "Haemonchus placei"], [32011027, "PRJNA700095_P_NODE_32278_length_300_cov_3.202643_g31014_i0", "PRJNA700095", "32278", "300", "3.202643", "9.607929", "Aphelenchoides avenae", "70226", "Nematoda", "Nematoda", "65.1", "9.2e-11", "", "NR", "KAH7715393.1", "70226", "g31014", "i0", "56.6", "1.02", "53", "22", "53", "1", "242", "84", "9", "60", "KAH7715393.1 hypothetical protein AAVH_17227, partial [Aphelenchoides avenae]", "diamond", "306", "65.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Aphelenchoididae", "Aphelenchoides", "Aphelenchoides avenae"], [32327794, "PRJNA700095_P_NODE_24499_length_348_cov_1.680000_g23235_i0", "PRJNA700095", "24499", "348", "1.68", "5.8464", "Gnathostoma spinigerum", "75299", "Nematoda", "Nematoda", "79", "2.46e-14", "", "NR", "MFH4976620.1", "75299", "g23235", "i0", "43.9", "4.68965517241379", "107", "57", "92.2", "3", "343", "23", "142", "245", "MFH4976620.1 hypothetical protein [Gnathostoma spinigerum]", "diamond", "1632", "79", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Gnathostomatidae", "Gnathostoma", "Gnathostoma spinigerum"], [32402004, "PRJNA700095_P_NODE_68819_length_228_cov_3.303226_g67554_i0", "PRJNA700095", "68819", "228", "3.303226", "7.53135528", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "58.5", "1.68e-8", "", "NR", "KAK0400478.1", "289476", "g67554", "i0", "60", "2.34210526315789", "45", "18", "59.2", "0", "92", "226", "102", "146", "KAK0400478.1 hypothetical protein QR680_015269 [Steinernema hermaphroditum]", "diamond", "534", "58.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Steinernematidae", "Steinernema", "Steinernema hermaphroditum"], [32485794, "PRJNA700095_P_NODE_50179_length_253_cov_1.322222_g48915_i0", "PRJNA700095", "50179", "253", "1.322222", "3.34522166", "Halicephalobus sp. NKZ332", "2598192", "Nematoda", "Nematoda", "42.4", "0.0487", "", "NR", "KAE9551586.1", "2598192", "g48915", "i0", "32.1", "0.924901185770751", "78", "39", "75.9", "3", "2", "193", "147", "224", "KAE9551586.1 hypothetical protein FO519_005193 [Halicephalobus sp. NKZ332]", "diamond", "234", "42.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Panagrolaimidae", "Halicephalobus", "Halicephalobus sp. NKZ332"], [32623028, "PRJNA700095_P_NODE_64260_length_242_cov_0.905325_g62996_i0", "PRJNA700095", "64260", "242", "0.905325", "2.1908865", "Metazoa", "33208", "Nematoda", "Nematoda", "53.9", "4.27e-6", "", "NR", "EFP13371.1", "31234", "g62996", "i0", "42.7", "6.45867768595041", "75", "39", "93", "2", "242", "18", "673", "743", "EFP13371.1 CRE-EMB-4 protein [Caenorhabditis remanei]", "diamond", "1563", "54.3", "0.992633517495396", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis remanei"]], "truncated": false, "filtered_table_rows_count": 24, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA700095", "p1": "Opisthokonta", "p2": "Nematoda"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda", "results": [{"value": "PRJNA700095", "label": "PRJNA700095", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Opisthokonta&tax_phylum=Nematoda", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda", "results": [{"value": "diamond", "label": "diamond", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_phylum=Nematoda", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta&tax_phylum=Nematoda", "results": [{"value": "Nematoda", "label": "Nematoda", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA700095&tax_clade=Opisthokonta", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 242.9090400109999}