{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA699078\", tax_phylum = \"Actinomycetota\" and tax_superkingdom = \"Bacteria\"", "rows": [[1184124, "PRJNA699078_S_NODE_49241_length_244_cov_1.579487_g48292_i0", "PRJNA699078", "49241", "244", "1.579487", "3.85394828", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "451", "1.86e-122", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g48292", "i0", "100", "287.549180327869", "244", "0", "100", "0", "1", "244", "55726", "55969", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "70162", "451", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [3735915, "PRJNA699078_S_NODE_67243_length_206_cov_0.993631_g66294_i0", "PRJNA699078", "67243", "206", "0.993631", "2.04687986", "Brevibacterium", "1696", "Bacteria", "Bacteria", "381", "2.0199999999999994e-101", "", "NTclustered", "gi|1943100173|gb|CP065629.1|", "33889", "g66294", "i0", "100", "346.058252427184", "206", "0", "100", "0", "1", "206", "599203", "599408", "Brevibacterium casei strain FDAARGOS_937 chromosome, complete genome", "blastn", "71288", "381", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Brevibacteriaceae", "Brevibacterium", "Brevibacterium casei"], [5786262, "PRJNA699078_S_NODE_78165_length_190_cov_1.446809_g77216_i0", "PRJNA699078", "78165", "190", "1.446809", "2.7489371", "Brevibacterium casei", "33889", "Bacteria", "Bacteria", "351", "1.4399999999999997e-92", "", "NTclustered", "gi|1943100173|gb|CP065629.1|", "33889", "g77216", "i0", "100", "342.031578947368", "190", "0", "100", "0", "1", "190", "598410", "598599", "Brevibacterium casei strain FDAARGOS_937 chromosome, complete genome", "blastn", "64986", "351", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Brevibacteriaceae", "Brevibacterium", "Brevibacterium casei"], [11387693, "PRJNA699078_S_NODE_70169_length_201_cov_1.638158_g69220_i0", "PRJNA699078", "70169", "201", "1.638158", "3.29269758", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "372", "1.18e-98", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g69220", "i0", "100", "209.164179104478", "201", "0", "100", "0", "1", "201", "56946", "57146", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "42042", "372", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [11387698, "PRJNA699078_S_NODE_92049_length_174_cov_1.408000_g91100_i0", "PRJNA699078", "92049", "174", "1.408", "2.44992", "Kocuria", "57493", "Bacteria", "Bacteria", "322", "1.01e-83", "", "NTclustered", "gi|923033569|gb|CP012507.1|", "71999", "g91100", "i0", "100", "297.551724137931", "174", "0", "100", "0", "1", "174", "219838", "219665", "Kocuria palustris strain MU14/1, complete genome", "blastn", "51774", "322", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Kocuria", "Kocuria palustris"], [12663605, "PRJNA699078_S_NODE_32070_length_305_cov_1.355469_g31121_i0", "PRJNA699078", "32070", "305", "1.355469", "4.13418045", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "518", "2.33e-142", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g31121", "i0", "100", "246.255737704918", "280", "0", "92", "0", "1", "280", "56493", "56214", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "75108", "518", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [17259518, "PRJNA699078_S_NODE_101494_length_166_cov_1.333333_g100545_i0", "PRJNA699078", "101494", "166", "1.333333", "2.21333278", "Aeromicrobium chenweiae", "2079793", "Bacteria", "Bacteria", "67.6", "4.96e-7", "", "NTclustered", "gi|1380481754|gb|CP026952.1|", "2079793", "g100545", "i0", "95.238", "0.427710843373494", "42", "2", "25", "0", "7", "48", "1343662", "1343703", "Aeromicrobium chenweiae strain 592 chromosome, complete genome", "blastn", "71", "67.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Nocardioidaceae", "Aeromicrobium", "Aeromicrobium chenweiae"], [20310424, "PRJNA699078_S_NODE_105496_length_163_cov_2.771930_g104547_i0", "PRJNA699078", "105496", "163", "2.77193", "4.5182459", "Cutibacterium", "1912216", "Bacteria", "Bacteria", "302", "1.22e-77", "", "NTclustered", "gi|1446500593|gb|CP031442.1|", "1747", "g104547", "i0", "100", "256.159509202454", "163", "0", "100", "0", "1", "163", "55547", "55709", "Cutibacterium acnes strain KCOM 1315 chromosome, complete genome", "blastn", "41754", "302", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [28187902, "PRJNA699078_S_NODE_104486_length_164_cov_1.356522_g103537_i0", "PRJNA699078", "104486", "164", "1.356522", "2.22469608", "Nostocoides jenkinsii", "330834", "Bacteria", "Bacteria", "64.7", "3.44e-11", "", "NR", "WP_157038630.1", "330834", "g103537", "i0", "60", "1.00609756097561", "55", "18", "97", "2", "164", "6", "108", "160", "WP_157038630.1 hypothetical protein [Nostocoides jenkinsii]", "diamond", "165", "64.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Intrasporangiaceae", "Nostocoides", "Nostocoides jenkinsii"], [28282651, "PRJNA699078_S_NODE_74206_length_195_cov_2.493151_g73257_i0", "PRJNA699078", "74206", "195", "2.493151", "4.86164445", "Acidimicrobiales bacterium", "2201156", "Bacteria", "Bacteria", "40.8", "0.0443", "", "NR", "HVB51544.1", "2201156", "g73257", "i0", "34.4", "0.938461538461538", "61", "39", "93.8", "1", "13", "195", "35", "94", "HVB51544.1 hypothetical protein [Acidimicrobiales bacterium]", "diamond", "183", "40.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", null, null, "Acidimicrobiales bacterium"], [28377491, "PRJNA699078_S_NODE_17766_length_390_cov_6.797654_g16819_i0", "PRJNA699078", "17766", "390", "6.797654", "26.5108506", "Acidimicrobiales bacterium", "2201156", "Bacteria", "Bacteria", "82.4", "2.4e-15", "", "NR", "HMG42021.1", "2201156", "g16819", "i0", "43.8", "2.58461538461538", "112", "45", "86.2", "3", "389", "54", "458", "551", "HMG42021.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Acidimicrobiales bacterium]", "diamond", "1008", "82.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", null, null, "Acidimicrobiales bacterium"], [28630408, "PRJNA699078_S_NODE_59707_length_219_cov_3.323529_g58758_i0", "PRJNA699078", "59707", "219", "3.323529", "7.27852851", "Kitasatospora acidiphila", "2567942", "Bacteria", "Bacteria", "64.3", "3.4e-10", "", "NR", "WP_141637006.1", "2567942", "g58758", "i0", "53.1", "0.876712328767123", "64", "22", "87.7", "1", "8", "199", "194", "249", "WP_141637006.1 SDR family NAD(P)-dependent oxidoreductase [Kitasatospora acidiphila]", "diamond", "192", "64.3", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Kitasatospora", "Kitasatospora acidiphila"], [29336039, "PRJNA699078_S_NODE_15269_length_413_cov_1.406593_g14330_i0", "PRJNA699078", "15269", "413", "1.406593", "5.80922909", "Streptomyces", "1883", "Bacteria", "Bacteria", "48.5", "0.00213", "", "NR", "WP_061916789.1", "285568", "g14330", "i0", "52.4", "2.32445520581114", "42", "20", "30.5", "0", "4", "129", "581", "622", "WP_061916789.1 AMP-dependent synthetase/ligase [Streptomyces bungoensis]", "diamond", "960", "48.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces bungoensis"], [29482442, "PRJNA699078_S_NODE_82930_length_184_cov_1.629630_g81981_i0", "PRJNA699078", "82930", "184", "1.62963", "2.9985192", "Amycolatopsis acididurans", "2724524", "Bacteria", "Bacteria", "45.4", "8.03e-4", "", "NR", "WP_168521232.1", "2724524", "g81981", "i0", "46.2", "0.635869565217391", "39", "21", "63.6", "0", "183", "67", "103", "141", "WP_168521232.1 DUF6314 family protein [Amycolatopsis acididurans]", "diamond", "117", "45.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Pseudonocardiales", "Pseudonocardiaceae", "Amycolatopsis", "Amycolatopsis acididurans"], [29588277, "PRJNA699078_S_NODE_106590_length_163_cov_0.912281_g105641_i0", "PRJNA699078", "106590", "163", "0.912281", "1.48701803", "Bacillati", "1783272", "Bacteria", "Bacteria", "64.7", "2e-10", "", "NR", "MDT5389383.1", "1785", "g105641", "i0", "55.6", "31.8220858895706", "54", "23", "97.5", "1", "159", "1", "112", "165", "MDT5389383.1 molecular chaperone DnaK [Mycobacterium sp.]", "diamond", "5187", "65.1", "0.993855606758833", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycobacterium", "Mycobacterium sp."], [29640213, "PRJNA699078_S_NODE_98310_length_168_cov_1.722689_g97361_i0", "PRJNA699078", "98310", "168", "1.722689", "2.89411752", "Solirubrobacteraceae bacterium", "2586742", "Bacteria", "Bacteria", "41.6", "0.0168", "", "NR", "HEY8638455.1", "2586742", "g97361", "i0", "39.6", "0.857142857142857", "48", "29", "85.7", "0", "23", "166", "72", "119", "HEY8638455.1 SDR family oxidoreductase [Solirubrobacteraceae bacterium]", "diamond", "144", "41.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Solirubrobacteraceae", null, "Solirubrobacteraceae bacterium"], [29766699, "PRJNA699078_S_NODE_42931_length_263_cov_2.317757_g41982_i0", "PRJNA699078", "42931", "263", "2.317757", "6.09570091", "Coriobacteriales bacterium", "2478480", "Bacteria", "Bacteria", "64.3", "1.98e-11", "", "NR", "MDR0308671.1", "2478480", "g41982", "i0", "48", "1.18631178707224", "50", "26", "57", "0", "19", "168", "1", "50", "MDR0308671.1 ricin-type beta-trefoil lectin domain protein [Coriobacteriales bacterium]", "diamond", "312", "64.3", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Coriobacteriia", "Coriobacteriales", null, null, "Coriobacteriales bacterium"], [30525027, "PRJNA699078_S_NODE_73753_length_196_cov_1.414966_g72804_i0", "PRJNA699078", "73753", "196", "1.414966", "2.77333336", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "52.8", "4.71e-6", "", "NR", "MDA8062228.1", "2900548", "g72804", "i0", "36.1", "0.933673469387755", "61", "36", "88.8", "1", "10", "183", "42", "102", "MDA8062228.1 class I SAM-dependent methyltransferase [Actinomycetota bacterium]", "diamond", "183", "52.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [30967541, "PRJNA699078_S_NODE_57074_length_225_cov_1.448864_g56125_i0", "PRJNA699078", "57074", "225", "1.448864", "3.259944", "Actinomyces minihominis", "2002838", "Bacteria", "Bacteria", "67.8", "4.37e-11", "", "NR", "WP_099331912.1", "2002838", "g56125", "i0", "47.8", "2.81333333333333", "67", "34", "88", "1", "213", "16", "353", "419", "WP_099331912.1 UTP--glucose-1-phosphate uridylyltransferase [Actinomyces minihominis]", "diamond", "633", "67.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Actinomycetales", "Actinomycetaceae", "Actinomyces", "Actinomyces minihominis"], [31124994, "PRJNA699078_S_NODE_82735_length_184_cov_2.311111_g81786_i0", "PRJNA699078", "82735", "184", "2.311111", "4.25244424", "Mycolicibacterium moriokaense", "39691", "Bacteria", "Bacteria", "43.9", "0.00684", "", "NR", "WP_110317104.1", "39691", "g81786", "i0", "38.3", "0.766304347826087", "47", "29", "76.6", "0", "16", "156", "321", "367", "WP_110317104.1 thioester reductase domain-containing protein [Mycolicibacterium moriokaense]", "diamond", "141", "43.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycolicibacterium", "Mycolicibacterium moriokaense"], [31389694, "PRJNA699078_S_NODE_79156_length_189_cov_1.114286_g78207_i0", "PRJNA699078", "79156", "189", "1.114286", "2.10600054", "root", "1", "Root_unresolved", "Root_unresolved", "58.5", "4.38e-9", "", "NR", "MDO4928303.1", "1720", "g78207", "i0", "48.4", "24.3333333333333", "62", "31", "98.4", "1", "4", "189", "45", "105", "MDO4928303.1 iron-sulfur cluster assembly accessory protein [Corynebacterium sp.]", "diamond", "4599", "58.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium sp."]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA699078", "p1": "Actinomycetota", "p2": "Bacteria"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "results": [{"value": "PRJNA699078", "label": "PRJNA699078", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA699078&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 292.7759759986657}