{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA690592\", tax_clade = \"delta/epsilon subdivisions\" and tax_superkingdom = \"Bacteria\"", "rows": [[14700561, "PRJNA690592_S_NODE_29292_length_558_cov_2.072165_g28292_i0", "PRJNA690592", "29292", "558", "2.072165", "11.5626807", "Persicimonas caeni", "2292766", "Bacteria", "Bacteria", "69.4", "5.46e-7", "", "NTclustered", "gi|1695542189|gb|CP041186.1|", "2292766", "g28292", "i0", "89.091", "0.263440860215054", "55", "6", "10", "0", "1", "55", "7226688", "7226742", "Persicimonas caeni strain YN101 chromosome", "blastn", "147", "69.4", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Bradymonadaceae", "Persicimonas", "Persicimonas caeni"], [17249586, "PRJNA690592_S_NODE_38234_length_494_cov_7.308789_g37223_i0", "PRJNA690592", "38234", "494", "7.308789", "36.10541766", "uncultured delta proteobacterium", "34034", "Bacteria", "Bacteria", "647", "0", "", "NTclustered", "gi|374854163|dbj|AP011765.1|", "34034", "g37223", "i0", "90.342", "201.779352226721", "497", "42", "100", "6", "1", "494", "14674", "14181", "Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12", "blastn", "99679", "647", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "uncultured delta proteobacterium"], [19030646, "PRJNA690592_S_NODE_153555_length_274_cov_1.517413_g152541_i0", "PRJNA690592", "153555", "274", "1.517413", "4.15771162", "Myxococcota", "2818505", "Bacteria", "Bacteria", "388", "1.69e-103", "", "NTclustered", "gi|386873771|gb|JQ624277.1|", "34034", "g152541", "i0", "92.364", "100.386861313869", "275", "17", "99", "4", "1", "273", "402", "674", "Uncultured delta proteobacterium clone OTU-2-AFB 16S ribosomal RNA gene, partial sequence", "blastn", "27506", "388", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "uncultured delta proteobacterium"], [27177065, "PRJNA690592_S_NODE_136902_length_288_cov_1.400000_g135888_i0", "PRJNA690592", "136902", "288", "1.4", "4.032", "Bradymonadales bacterium", "2099667", "Bacteria", "Bacteria", "49.7", "2.3e-4", "", "NR", "MBN1946190.1", "2099667", "g135888", "i0", "36.4", "1.11458333333333", "55", "35", "57.3", "0", "2", "166", "721", "775", "MBN1946190.1 methionine--tRNA ligase [Bradymonadales bacterium]", "diamond", "321", "49.7", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", null, null, "Bradymonadales bacterium"], [27662679, "PRJNA690592_S_NODE_110764_length_314_cov_2.128631_g109750_i0", "PRJNA690592", "110764", "314", "2.128631", "6.68390134", "Myxococcota", "2818505", "Bacteria", "Bacteria", "70.9", "2.66e-12", "", "NR", "OGQ91000.1", "1797895", "g109750", "i0", "41.1", "3", "107", "52", "99.4", "3", "2", "313", "54", "152", "OGQ91000.1 MAG: hypothetical protein A2289_00830 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "942", "70.9", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [27840384, "PRJNA690592_S_NODE_193984_length_248_cov_1.422857_g192970_i0", "PRJNA690592", "193984", "248", "1.422857", "3.52868536", "Deltaproteobacteria bacterium SM23_61", "1703399", "Bacteria", "Bacteria", "43.5", "0.0197", "", "NR", "KPK87443.1", "1703399", "g192970", "i0", "51.2", "0.495967741935484", "41", "19", "49.6", "1", "15", "137", "216", "255", "KPK87443.1 MAG: 2-ketoisovalerate ferredoxin oxidoreductase [Deltaproteobacteria bacterium SM23_61]", "diamond", "123", "43.5", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium SM23_61"], [28250854, "PRJNA690592_S_NODE_142726_length_283_cov_1.271429_g141712_i0", "PRJNA690592", "142726", "283", "1.271429", "3.59814407", "Persicimonas sp.", "2766932", "Bacteria", "Bacteria", "81.6", "5.85e-16", "", "NR", "MFP4598647.1", "2766932", "g141712", "i0", "47.9", "1.96113074204947", "94", "47", "99.6", "1", "282", "1", "52", "143", "MFP4598647.1 DMT family transporter [Persicimonas sp.]", "diamond", "555", "81.6", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Bradymonadaceae", "Persicimonas", "Persicimonas sp."], [29083482, "PRJNA690592_S_NODE_94828_length_335_cov_0.881679_g93814_i0", "PRJNA690592", "94828", "335", "0.881679", "2.95362465", "Bacteria", "2", "Bacteria", "Bacteria", "69.7", "2.04e-13", "", "NR", "PIU86675.1", "1973970", "g93814", "i0", "68.2", "0.770149253731343", "44", "14", "39.4", "0", "307", "176", "1", "44", "PIU86675.1 MAG: hypothetical protein COS67_01255, partial [Deltaproteobacteria bacterium CG06_land_8_20_14_3_00_44_19]", "diamond", "258", "69.7", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG06_land_8_20_14_3_00_44_19"], [29292900, "PRJNA690592_S_NODE_152609_length_275_cov_1.143564_g151595_i0", "PRJNA690592", "152609", "275", "1.143564", "3.144801", "Deltaproteobacteria bacterium CG23_combo_of_CG", "2026735", "Bacteria", "Bacteria", "43.9", "0.018", "", "NR", "PIP43900.1", "1973981", "g151595", "i0", "34.5", "0.6", "55", "35", "58.9", "1", "45", "206", "21", "75", "PIP43900.1 MAG: hypothetical protein COX17_04520 [Deltaproteobacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_60_8]", "diamond", "165", "43.9", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_60_8"], [29356229, "PRJNA690592_S_NODE_216589_length_240_cov_2.305389_g215575_i0", "PRJNA690592", "216589", "240", "2.305389", "5.5329336", "Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21", "2013749", "Bacteria", "Bacteria", "46.2", "5.89e-4", "", "NR", "PKN23782.1", "2013749", "g215575", "i0", "42.9", "0.7", "56", "28", "65", "1", "10", "165", "29", "84", "PKN23782.1 MAG: hypothetical protein CVU64_23660 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21]", "diamond", "168", "46.2", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21"], [30082369, "PRJNA690592_S_NODE_52812_length_429_cov_3.174157_g51798_i0", "PRJNA690592", "52812", "429", "3.174157", "13.61713353", "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15", "1797895", "Bacteria", "Bacteria", "106", "2.46e-25", "", "NR", "OGQ91000.1", "1797895", "g51798", "i0", "42.9", "1.97202797202797", "140", "76", "97.9", "2", "421", "2", "54", "189", "OGQ91000.1 MAG: hypothetical protein A2289_00830 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "846", "106", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [30114005, "PRJNA690592_S_NODE_197912_length_247_cov_0.885057_g196898_i0", "PRJNA690592", "197912", "247", "0.885057", "2.18609079", "Persicimonas caeni", "2292766", "Bacteria", "Bacteria", "97.1", "2.92e-21", "", "NR", "WP_141201199.1", "2292766", "g196898", "i0", "59.3", "4.89473684210526", "81", "33", "98.4", "0", "247", "5", "377", "457", "WP_141201199.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Persicimonas caeni]", "diamond", "1209", "97.1", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Bradymonadaceae", "Persicimonas", "Persicimonas caeni"], [30967243, "PRJNA690592_S_NODE_13954_length_786_cov_2.208976_g13087_i0", "PRJNA690592", "13954", "786", "2.208976", "17.36255136", "Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_6", "2026735", "Bacteria", "Bacteria", "148", "2.86e-40", "", "NR", "OGQ79495.1", "1797894", "g13087", "i0", "44.9", "0.603053435114504", "158", "86", "60.3", "1", "312", "785", "10", "166", "OGQ79495.1 MAG: hypothetical protein A3F90_11480 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19]", "diamond", "474", "148", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19"], [31389634, "PRJNA690592_S_NODE_184056_length_252_cov_1.290503_g183042_i0", "PRJNA690592", "184056", "252", "1.290503", "3.25206756", "Bacteria", "2", "Bacteria", "Bacteria", "89.4", "1.58e-19", "", "NR", "OGQ24388.1", "1797848", "g183042", "i0", "53", "7.90476190476191", "83", "39", "98.8", "0", "2", "250", "140", "222", "OGQ24388.1 MAG: hypothetical protein A2138_06805 [Deltaproteobacteria bacterium RBG_16_71_12]", "diamond", "1992", "89.4", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RBG_16_71_12"], [31852478, "PRJNA690592_S_NODE_60177_length_406_cov_1.042042_g59163_i0", "PRJNA690592", "60177", "406", "1.042042", "4.23069052", "Microvenator marinus", "2600177", "Bacteria", "Bacteria", "143", "1.58e-36", "", "NR", "WP_146958785.1", "2600177", "g59163", "i0", "53.8", "5.88916256157635", "132", "58", "97.5", "2", "397", "2", "689", "817", "WP_146958785.1 bifunctional aspartate kinase/diaminopimelate decarboxylase [Microvenator marinus]", "diamond", "2391", "143", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Microvenatoraceae", "Microvenator", "Microvenator marinus"], [31947178, "PRJNA690592_S_NODE_114397_length_310_cov_1.624473_g113383_i0", "PRJNA690592", "114397", "310", "1.624473", "5.0358663", "Bradymonadales bacterium", "2099667", "Bacteria", "Bacteria", "60.5", "4.95e-8", "", "NR", "MBN1946190.1", "2099667", "g113383", "i0", "33.3", "0.958064516129032", "99", "64", "95.8", "1", "298", "2", "562", "658", "MBN1946190.1 methionine--tRNA ligase [Bradymonadales bacterium]", "diamond", "297", "60.5", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", null, null, "Bradymonadales bacterium"], [31958783, "PRJNA690592_S_NODE_14957_length_761_cov_3.559593_g14070_i0", "PRJNA690592", "14957", "761", "3.559593", "27.08850273", "delta/epsilon subdivisions", "68525", "Bacteria", "Bacteria", "150", "6.67e-40", "", "NR", "PJB39919.1", "1973967", "g14070", "i0", "40.7", "10.3521681997372", "236", "110", "91.9", "7", "759", "61", "93", "301", "PJB39919.1 MAG: hypothetical protein CO108_16020 [Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12]", "diamond", "7878", "150", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_63_12"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA690592", "p1": "delta/epsilon subdivisions", "p2": "Bacteria"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "results": [{"value": "PRJNA690592", "label": "PRJNA690592", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "results": [{"value": "diamond", "label": "diamond", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "results": [{"value": "delta/epsilon subdivisions", "label": "delta/epsilon subdivisions", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690592&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "results": [], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 197.45901799979038}