{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA690234\" and tax_clade = \"PVC group\"", "rows": [[670412, "PRJNA690234_P_NODE_32461_length_233_cov_2.831250_g32094_i0", "PRJNA690234", "32461", "233", "2.83125", "6.5968125", "Fuerstiella marisgermanici", "1891926", "Bacteria", "Bacteria", "303", "5.21e-78", "", "NTclustered", "gi|1140105870|gb|CP017641.1|", "1891926", "g32094", "i0", "90.435", "73.2103004291845", "230", "22", "99", "0", "4", "233", "5363654", "5363425", "Fuerstiella marisgermanici strain NH11 chromosome, complete genome", "blastn", "17058", "303", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", "Fuerstiella", "Fuerstiella marisgermanici"], [1945989, "PRJNA690234_P_NODE_12382_length_360_cov_1.358885_g12015_i0", "PRJNA690234", "12382", "360", "1.358885", "4.891986", "planctomycete str. 139", "149588", "Bacteria", "Bacteria", "494", "4.72e-135", "", "NTclustered", "gi|12583967|gb|AF245371.1|AF245371", "149588", "g12015", "i0", "91.413", "59.2083333333333", "361", "30", "100", "1", "1", "360", "1415", "1775", "Planctomycete str. 139 23S ribosomal RNA gene, partial sequence", "blastn", "21315", "494", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", null, "planctomycete str. 139"], [8323184, "PRJNA690234_P_NODE_19247_length_289_cov_1.143519_g18880_i0", "PRJNA690234", "19247", "289", "1.143519", "3.30476991", "Planctomyces sp. SH-PL14", "1632864", "Bacteria", "Bacteria", "340", "5.0999999999999986e-89", "", "NTclustered", "gi|1015434452|gb|CP011270.1|", "1632864", "g18880", "i0", "87.889", "6.2076124567474", "289", "35", "100", "0", "1", "289", "7872801", "7873089", "Planctomyces sp. SH-PL14, complete genome", "blastn", "1794", "340", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", "Planctomyces", "Planctomyces sp. SH-PL14"], [10873939, "PRJNA690234_P_NODE_11529_length_374_cov_1.790698_g11163_i0", "PRJNA690234", "11529", "374", "1.790698", "6.69721052", "uncultured Planctomycetaceae bacterium", "100233", "Bacteria", "Bacteria", "344", "5.24e-90", "", "NTclustered", "gi|2874253903|emb|OY970228.1|", "100233", "g11163", "i0", "83.463", "199.885026737968", "387", "47", "99", "11", "1", "373", "2664416", "2664033", "MAG: uncultured Planctomycetaceae bacterium isolate MFD00731.bin.c.1 genome assembly, chromosome: 1", "blastn", "74757", "344", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", null, "uncultured Planctomycetaceae bacterium"], [13424273, "PRJNA690234_P_NODE_5991_length_529_cov_1.557018_g5627_i0", "PRJNA690234", "5991", "529", "1.557018", "8.23662522", "Planctomyces sp. SH-PL62", "1636152", "Bacteria", "Bacteria", "542", "2.53e-149", "", "NTclustered", "gi|1015454008|gb|CP011273.1|", "1636152", "g5627", "i0", "93.261", "73.3005671077505", "371", "20", "70", "3", "1", "369", "1155480", "1155113", "Planctomyces sp. SH-PL62, complete genome", "blastn", "38776", "542", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", "Planctomyces", "Planctomyces sp. SH-PL62"], [19797021, "PRJNA690234_P_NODE_19436_length_287_cov_2.864486_g19069_i0", "PRJNA690234", "19436", "287", "2.864486", "8.22107482", "Symmachiella dynata", "2527995", "Bacteria", "Bacteria", "424", "4.88e-114", "", "NTclustered", "gi|1712609668|gb|CP036276.1|", "2527995", "g19069", "i0", "93.38", "125.390243902439", "287", "17", "99", "2", "1", "286", "1041543", "1041258", "Symmachiella dynata strain Mal52 chromosome, complete genome", "blastn", "35987", "424", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", "Symmachiella", "Symmachiella dynata"], [22347394, "PRJNA690234_P_NODE_17418_length_304_cov_1.350649_g17051_i0", "PRJNA690234", "17418", "304", "1.350649", "4.10597296", "Prosthecobacter vanneervenii", "48466", "Bacteria", "Bacteria", "510", "3.89e-140", "", "NTclustered", "gi|12583975|gb|AF245379.1|AF245379", "48466", "g17051", "i0", "97.039", "235.148026315789", "304", "8", "100", "1", "1", "304", "1256", "954", "Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence", "blastn", "71485", "510", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter vanneervenii"], [27019131, "PRJNA690234_P_NODE_28502_length_247_cov_0.896552_g28135_i0", "PRJNA690234", "28502", "247", "0.896552", "2.21448344", "Pirellulales bacterium", "2715253", "Bacteria", "Bacteria", "124", "9.63e-31", "", "NR", "MEX2091435.1", "2715253", "g28135", "i0", "70.7", "0.995951417004049", "82", "24", "99.6", "0", "2", "247", "275", "356", "MEX2091435.1 endo-1,4-beta-xylanase [Pirellulales bacterium]", "diamond", "246", "124", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Pirellulales", null, null, "Pirellulales bacterium"], [27177030, "PRJNA690234_P_NODE_19922_length_284_cov_1.734597_g19555_i0", "PRJNA690234", "19922", "284", "1.734597", "4.92625548", "Gemmataceae bacterium", "2052164", "Bacteria", "Bacteria", "54.7", "3.03e-6", "", "NR", "MFN4258049.1", "2052164", "g19555", "i0", "35.9", "0.823943661971831", "78", "50", "82.4", "0", "51", "284", "5", "82", "MFN4258049.1 tetratricopeptide repeat protein [Gemmataceae bacterium]", "diamond", "234", "54.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Gemmatales", "Gemmataceae", null, "Gemmataceae bacterium"], [27714618, "PRJNA690234_P_NODE_26824_length_250_cov_0.881356_g26457_i0", "PRJNA690234", "26824", "250", "0.881356", "2.20339", "Planctomyces sp.", "37635", "Bacteria", "Bacteria", "142", "1.47e-39", "", "NR", "MBA4029640.1", "37635", "g26457", "i0", "84.3", "0.996", "83", "13", "99.6", "0", "250", "2", "96", "178", "MBA4029640.1 nucleotide pyrophosphatase [Planctomyces sp.]", "diamond", "249", "142", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", "Planctomycetia", "Planctomycetales", "Planctomycetaceae", "Planctomyces", "Planctomyces sp."], [31725839, "PRJNA690234_P_NODE_6097_length_524_cov_1.620843_g5733_i0", "PRJNA690234", "6097", "524", "1.620843", "8.49321732", "Simkaniaceae bacterium", "2698248", "Bacteria", "Bacteria", "183", "7.559999999999998e-54", "", "NR", "MCI5051869.1", "2698248", "g5733", "i0", "54.6", "1.9236641221374", "174", "76", "99.6", "2", "524", "3", "140", "310", "MCI5051869.1 transaldolase [Simkaniaceae bacterium]", "diamond", "1008", "183", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", null, "Simkaniaceae bacterium"], [32169056, "PRJNA690234_P_NODE_14498_length_333_cov_2.630769_g14131_i0", "PRJNA690234", "14498", "333", "2.630769", "8.76046077", "Candidatus Udaeobacter sp.", "2665650", "Bacteria", "Bacteria", "45.1", "0.00974", "", "NR", "HEU0273395.1", "2665650", "g14131", "i0", "30.7", "1.86486486486486", "114", "66", "92.8", "3", "326", "18", "40", "151", "HEU0273395.1 YdeI family protein [Candidatus Udaeobacter sp.]", "diamond", "621", "45.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Candidatus Udaeobacter", "Candidatus Udaeobacter sp."]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA690234", "p1": "PVC group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group", "results": [{"value": "PRJNA690234", "label": "PRJNA690234", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group", "results": [{"value": "blastn", "label": "blastn", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 5, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group", "results": [{"value": "PVC group", "label": "PVC group", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group", "results": [{"value": "Planctomycetota", "label": "Planctomycetota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group&tax_phylum=Planctomycetota", "selected": false}, {"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": false}, {"value": "Chlamydiota", "label": "Chlamydiota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA690234&tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 179.47464203462005}