{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA688931\" and tax_phylum = \"Thermodesulfobacteriota\"", "rows": [[5006390, "PRJNA688931_P_NODE_24264_length_208_cov_0.955975_g24051_i0", "PRJNA688931", "24264", "208", "0.955975", "1.988428", "Geomonas", "2651583", "Bacteria", "Bacteria", "331", "2.0900000000000002e-86", "", "NTclustered", "gi|2233265061|gb|CP096574.1|", "2740185", "g24051", "i0", "95.261", "196.745192307692", "211", "7", "100", "2", "1", "208", "885209", "885419", "Geomonas paludis strain RG22 chromosome, complete genome", "blastn", "40923", "331", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", "Geomonas", "Geomonas paludis"], [8321747, "PRJNA688931_P_NODE_41967_length_163_cov_0.912281_g41754_i0", "PRJNA688931", "41967", "163", "0.912281", "1.48701803", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "195", "2.13e-45", "", "NTclustered", "gi|2893358420|emb|OZ220712.1|", "2202153", "g41754", "i0", "88.415", "173", "164", "16", "99", "3", "1", "162", "1711983", "1711821", "MAG: Thermodesulfobacteriota bacterium isolate 564989d4-0a31-48dd-8468-51938819ad86 genome assembly, chromosome: 1", "blastn", "28199", "195", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [20304449, "PRJNA688931_P_NODE_22296_length_217_cov_0.970238_g22083_i0", "PRJNA688931", "22296", "217", "0.970238", "2.10541646", "Geotalea", "2910589", "Bacteria", "Bacteria", "298", "2.23e-76", "", "NTclustered", "gi|221562406|gb|CP001390.1|", "316067", "g22083", "i0", "93.564", "212.175115207373", "202", "9", "92", "3", "1", "200", "2114849", "2114650", "Geobacter daltonii FRC-32, complete genome", "blastn", "46042", "298", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Geobacterales", "Geobacteraceae", "Geotalea", "Geotalea daltonii"], [25404592, "PRJNA688931_P_NODE_42240_length_163_cov_0.903509_g42027_i0", "PRJNA688931", "42240", "163", "0.903509", "1.47271967", "root", "1", "Root_unresolved", "Root_unresolved", "302", "1.22e-77", "", "NTclustered", "gi|470481184|ref|NR_076459.1|", "29543", "g42027", "i0", "100", "183.20245398773", "163", "0", "100", "0", "1", "163", "994", "832", "Pelobacter propionicus strain Ott Bd 1 23S ribosomal RNA gene, complete sequence", "blastn", "29862", "302", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Desulfuromonadales", "Desulfuromonadaceae", "Pelobacter", "Pelobacter propionicus"], [26639123, "PRJNA688931_P_NODE_5041_length_495_cov_1.307175_g4829_i0", "PRJNA688931", "5041", "495", "1.307175", "6.47051625", "Desulfobacteraceae bacterium", "2049433", "Bacteria", "Bacteria", "151", "2.47e-39", "", "NR", "HAO22905.1", "2049433", "g4829", "i0", "39.8", "1.06666666666667", "176", "92", "98.2", "2", "6", "491", "213", "388", "HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium]", "diamond", "528", "151", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium"], [27240222, "PRJNA688931_P_NODE_10903_length_318_cov_4.416357_g10690_i0", "PRJNA688931", "10903", "318", "4.416357", "14.04401526", "Desulfatiglandales bacterium", "3024416", "Bacteria", "Bacteria", "43.5", "0.0397", "", "NR", "MFO7461411.1", "3024416", "g10690", "i0", "30.9", "0.886792452830189", "94", "56", "80.2", "3", "35", "289", "98", "191", "MFO7461411.1 cyclic nucleotide-binding domain-containing protein [Desulfatiglandales bacterium]", "diamond", "282", "43.5", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfatiglandales", null, null, "Desulfatiglandales bacterium"], [27240234, "PRJNA688931_P_NODE_1983_length_805_cov_3.078042_g1826_i0", "PRJNA688931", "1983", "805", "3.078042", "24.7782381", "Desulfobacter sp.", "2294", "Bacteria", "Bacteria", "184", "3.23e-49", "", "NR", "MDD9301020.1", "2294", "g1826", "i0", "40.3", "1.73664596273292", "233", "137", "86.8", "1", "5", "703", "566", "796", "MDD9301020.1 DUF819 family protein [Desulfobacter sp.]", "diamond", "1398", "184", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", "Desulfobacter", "Desulfobacter sp."], [27430211, "PRJNA688931_P_NODE_39583_length_165_cov_0.896552_g39370_i0", "PRJNA688931", "39583", "165", "0.896552", "1.4793108", "Thermodesulfobacterium sp. TA1", "2234087", "Bacteria", "Bacteria", "56.6", "1.59e-7", "", "NR", "WP_150071660.1", "2234087", "g39370", "i0", "50", "3.81818181818182", "52", "26", "94.5", "0", "8", "163", "302", "353", "WP_150071660.1 pyridoxal phosphate-dependent aminotransferase [Thermodesulfobacterium sp. TA1]", "diamond", "630", "56.6", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Thermodesulfobacteria", "Thermodesulfobacteriales", "Thermodesulfobacteriaceae", "Thermodesulfobacterium", "Thermodesulfobacterium sp. TA1"], [27777437, "PRJNA688931_P_NODE_4944_length_500_cov_1.505543_g4732_i0", "PRJNA688931", "4944", "500", "1.505543", "7.527715", "Desulfobacteraceae bacterium", "2049433", "Bacteria", "Bacteria", "82", "1.12e-14", "", "NR", "HAO22905.1", "2049433", "g4732", "i0", "30.6", "0.864", "144", "97", "84.6", "1", "4", "426", "411", "554", "HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium]", "diamond", "432", "82", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium"], [28124625, "PRJNA688931_P_NODE_38325_length_166_cov_0.888889_g38112_i0", "PRJNA688931", "38325", "166", "0.888889", "1.47555574", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "65.9", "8.86e-11", "", "NR", "MEW5733838.1", "2202153", "g38112", "i0", "55.8", "0.939759036144578", "52", "23", "94", "0", "9", "164", "309", "360", "MEW5733838.1 hypothetical protein [Thermodesulfobacteriota bacterium]", "diamond", "156", "65.9", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [29071996, "PRJNA688931_P_NODE_8_length_3936_cov_8.681760_g7_i0", "PRJNA688931", "8", "3936", "8.68176", "341.7140736", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "54.7", "6.32e-4", "", "NR", "GJM17643.1", "2202153", "g7", "i0", "25.3", "0.171493902439024", "225", "133", "16.1", "7", "1936", "1304", "10", "213", "GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium]", "diamond", "675", "54.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [29545281, "PRJNA688931_P_NODE_33750_length_173_cov_1.427419_g33537_i0", "PRJNA688931", "33750", "173", "1.427419", "2.46943487", "Candidatus Dadabacteria bacterium", "2080303", "Bacteria", "Bacteria", "113", "5.76e-31", "", "NR", "KAB2834671.1", "2080303", "g33537", "i0", "98.2", "0.988439306358382", "57", "1", "98.8", "0", "2", "172", "23", "79", "KAB2834671.1 MAG: ATPase, partial [Candidatus Dadabacteria bacterium]", "diamond", "171", "113", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Candidatus Dadabacteria", null, null, null, "Candidatus Dadabacteria bacterium"], [29829538, "PRJNA688931_P_NODE_40971_length_164_cov_0.895652_g40758_i0", "PRJNA688931", "40971", "164", "0.895652", "1.46886928", "Desulfobulbaceae bacterium", "2053307", "Bacteria", "Bacteria", "89.7", "2.4e-19", "", "NR", "MCK5195349.1", "2053307", "g40758", "i0", "85.2", "4.9390243902439", "54", "8", "98.8", "0", "163", "2", "7", "60", "MCK5195349.1 aldehyde dehydrogenase family protein [Desulfobulbaceae bacterium]", "diamond", "810", "89.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", null, "Desulfobulbaceae bacterium"], [29987547, "PRJNA688931_P_NODE_22711_length_215_cov_1.090361_g22498_i0", "PRJNA688931", "22711", "215", "1.090361", "2.34427615", "Desulfobacteraceae bacterium IS3", "1934248", "Bacteria", "Bacteria", "42.4", "0.0355", "", "NR", "OQX09992.1", "1934248", "g22498", "i0", "39.7", "0.948837209302326", "68", "38", "94.9", "2", "4", "207", "365", "429", "OQX09992.1 MAG: hypothetical protein BWK80_46230 [Desulfobacteraceae bacterium IS3]", "diamond", "204", "42.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium IS3"], [30220146, "PRJNA688931_P_NODE_21472_length_221_cov_1.197674_g21259_i0", "PRJNA688931", "21472", "221", "1.197674", "2.64685954", "Bacteria", "2", "Bacteria", "Bacteria", "48.5", "2.52e-4", "", "NR", "OGR10760.1", "1797910", "g21259", "i0", "27.9", "1.84615384615385", "68", "49", "92.3", "0", "217", "14", "312", "379", "OGR10760.1 MAG: sphingosine-1-phosphate lyase [Desulfobacula sp. GWF2_41_7]", "diamond", "408", "48.9", "0.991820040899796", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", "Desulfobacula", "Desulfobacula sp. GWF2_41_7"], [30587703, "PRJNA688931_P_NODE_36813_length_167_cov_1.313559_g36600_i0", "PRJNA688931", "36813", "167", "1.313559", "2.19364353", "Desulfobacteraceae bacterium", "2049433", "Bacteria", "Bacteria", "47", "4.25e-4", "", "NR", "HAO22905.1", "2049433", "g36600", "i0", "36.5", "0.934131736526946", "52", "33", "93.4", "0", "158", "3", "377", "428", "HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium]", "diamond", "156", "47", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium"], [31219419, "PRJNA688931_P_NODE_36655_length_167_cov_1.745763_g36442_i0", "PRJNA688931", "36655", "167", "1.745763", "2.91542421", "Candidatus Dadabacteria bacterium", "2080303", "Bacteria", "Bacteria", "45.1", "0.00101", "", "NR", "MCA9809949.1", "2080303", "g36442", "i0", "68.6", "1.92215568862275", "35", "11", "62.9", "0", "153", "49", "113", "147", "MCA9809949.1 3'(2'),5'-bisphosphate nucleotidase [Candidatus Dadabacteria bacterium]", "diamond", "321", "45.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Candidatus Dadabacteria", null, null, null, "Candidatus Dadabacteria bacterium"], [31409580, "PRJNA688931_P_NODE_29476_length_187_cov_1.449275_g29263_i0", "PRJNA688931", "29476", "187", "1.449275", "2.71014425", "Desulfobacterales bacterium", "2044940", "Bacteria", "Bacteria", "50.8", "1.41e-5", "", "NR", "MDX1707326.1", "2044940", "g29263", "i0", "41.5", "0.850267379679144", "53", "31", "85", "0", "186", "28", "34", "86", "MDX1707326.1 2-isopropylmalate synthase [Desulfobacterales bacterium]", "diamond", "159", "50.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", null, null, "Desulfobacterales bacterium"], [31757471, "PRJNA688931_P_NODE_8997_length_355_cov_1.339869_g8784_i0", "PRJNA688931", "8997", "355", "1.339869", "4.75653495", "Desulfobacteraceae bacterium", "2049433", "Bacteria", "Bacteria", "57", "1.33e-6", "", "NR", "HAO22905.1", "2049433", "g8784", "i0", "33.3", "1.84225352112676", "108", "59", "82.8", "4", "55", "348", "360", "464", "HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium]", "diamond", "654", "57", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium"], [31788882, "PRJNA688931_P_NODE_4477_length_528_cov_2.459290_g4267_i0", "PRJNA688931", "4477", "528", "2.45929", "12.9850512", "Desulfobulbaceae bacterium", "2053307", "Bacteria", "Bacteria", "45.8", "0.0412", "", "NR", "MCK5232122.1", "2053307", "g4267", "i0", "29.7", "0.670454545454545", "118", "59", "61.4", "3", "479", "156", "171", "274", "MCK5232122.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Desulfobulbaceae bacterium]", "diamond", "354", "45.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", null, "Desulfobulbaceae bacterium"], [31820587, "PRJNA688931_P_NODE_4237_length_543_cov_2.987854_g4030_i0", "PRJNA688931", "4237", "543", "2.987854", "16.22404722", "Desulfobacteraceae bacterium", "2049433", "Bacteria", "Bacteria", "172", "6.63e-48", "", "NR", "MCK5313174.1", "2049433", "g4030", "i0", "46.9", "0.988950276243094", "179", "94", "98.9", "1", "538", "2", "130", "307", "MCK5313174.1 M20/M25/M40 family metallo-hydrolase [Desulfobacteraceae bacterium]", "diamond", "537", "172", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium"], [32073820, "PRJNA688931_P_NODE_13638_length_281_cov_1.327586_g13425_i0", "PRJNA688931", "13638", "281", "1.327586", "3.73051666", "Desulfobacteraceae bacterium", "2049433", "Bacteria", "Bacteria", "72", "2.94e-12", "", "NR", "HAO22905.1", "2049433", "g13425", "i0", "35.4", "0.875444839857651", "82", "53", "87.5", "0", "258", "13", "402", "483", "HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium]", "diamond", "246", "72", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium"], [32105390, "PRJNA688931_P_NODE_11938_length_302_cov_2.549407_g11725_i0", "PRJNA688931", "11938", "302", "2.549407", "7.69920914", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "50.1", "1.24e-4", "", "NR", "GJM17643.1", "2202153", "g11725", "i0", "28.9", "0.963576158940397", "97", "66", "96.4", "2", "1", "291", "97", "190", "GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium]", "diamond", "291", "50.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [32137207, "PRJNA688931_P_NODE_438_length_1464_cov_2.990813_g386_i0", "PRJNA688931", "438", "1464", "2.990813", "43.78550232", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "59.7", "2.46e-5", "", "NR", "MCX8116456.1", "2202153", "g386", "i0", "23.3", "0.491803278688525", "240", "149", "48.8", "6", "34", "747", "210", "416", "MCX8116456.1 sodium-translocating pyrophosphatase [Thermodesulfobacteriota bacterium]", "diamond", "720", "59.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [32275386, "PRJNA688931_P_NODE_12038_length_301_cov_1.682540_g11825_i0", "PRJNA688931", "12038", "301", "1.68254", "5.0644454", "Cyanobacteriota/Melainabacteria group", "1798711", "Bacteria", "Bacteria", "51.6", "4.02e-5", "", "NR", "NLZ17542.1", "2053307", "g11825", "i0", "44.3", "2.90033222591362", "70", "35", "69.8", "2", "299", "90", "161", "226", "NLZ17542.1 CAP domain-containing protein [Desulfobulbaceae bacterium]", "diamond", "873", "51.6", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfobulbaceae", null, "Desulfobulbaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 25, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA688931", "p1": "Thermodesulfobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "PRJNA688931", "label": "PRJNA688931", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "diamond", "label": "diamond", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Thermodesulfobacteriota", "label": "Thermodesulfobacteriota", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 184.47964001097716}