{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA688931\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Spirochaetota\"", "rows": [[1944691, "PRJNA688931_P_NODE_6602_length_425_cov_3.369681_g6389_i0", "PRJNA688931", "6602", "425", "3.369681", "14.32114425", "root", "1", "Root_unresolved", "Root_unresolved", "200", "5.07e-63", "", "NR", "MCC5815248.1", "178", "g6389", "i0", "72.2", "11.7811764705882", "126", "34", "88.9", "1", "423", "46", "30", "154", "MCC5815248.1 glycine dehydrogenase (aminomethyl-transferring) [Leptospira sp.]", "diamond", "5007", "202", "0.99009900990099", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira sp."], [26618994, "PRJNA688931_P_NODE_521_length_1392_cov_24.794490_g461_i0", "PRJNA688931", "521", "1392", "24.79449", "345.1393008", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "75.5", "3.42e-11", "", "NR", "MDR2632347.1", "166", "g461", "i0", "27.5", "2.16379310344828", "189", "121", "38.1", "5", "1346", "816", "80", "264", "MDR2632347.1 CAP domain-containing protein [Treponema sp.]", "diamond", "3012", "75.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [26892647, "PRJNA688931_P_NODE_16601_length_252_cov_1.512315_g16388_i0", "PRJNA688931", "16601", "252", "1.512315", "3.8110338", "Leptospira perolatii", "2023191", "Bacteria", "Bacteria", "47", "0.00112", "", "NR", "WP_100715319.1", "2023191", "g16388", "i0", "50", "0.5", "42", "21", "50", "0", "252", "127", "196", "237", "WP_100715319.1 MORN repeat-containing protein [Leptospira perolatii]", "diamond", "126", "47", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Leptospira", "Leptospira perolatii"], [27461677, "PRJNA688931_P_NODE_23563_length_211_cov_0.950617_g23350_i0", "PRJNA688931", "23563", "211", "0.950617", "2.00580187", "Treponema sp.", "166", "Bacteria", "Bacteria", "55.1", "3.38e-7", "", "NR", "MBD5434140.1", "166", "g23350", "i0", "64.1", "0.554502369668246", "39", "14", "55.5", "0", "26", "142", "56", "94", "MBD5434140.1 ankyrin repeat domain-containing protein [Treponema sp.]", "diamond", "117", "55.1", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [27935183, "PRJNA688931_P_NODE_13025_length_288_cov_1.916318_g12812_i0", "PRJNA688931", "13025", "288", "1.916318", "5.51899584", "Spirochaetales bacterium", "2026792", "Bacteria", "Bacteria", "69.3", "9.1e-12", "", "NR", "MBN2874962.1", "2026792", "g12812", "i0", "52.9", "2.65625", "85", "40", "88.5", "0", "256", "2", "94", "178", "MBN2874962.1 CAP domain-containing protein [Spirochaetales bacterium]", "diamond", "765", "69.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [28945749, "PRJNA688931_P_NODE_28828_length_189_cov_1.850000_g28615_i0", "PRJNA688931", "28828", "189", "1.85", "3.4965", "Turneriella parva DSM 21527", "869212", "Bacteria", "Bacteria", "44.7", "0.00377", "", "NR", "AFM10782.1", "869212", "g28615", "i0", "38.3", "6.03174603174603", "60", "29", "95.2", "1", "182", "3", "152", "203", "AFM10782.1 membrane protease FtsH catalytic subunit [Turneriella parva DSM 21527]", "diamond", "1140", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Leptospirales", "Leptospiraceae", "Turneriella", "Turneriella parva"], [29588169, "PRJNA688931_P_NODE_37230_length_167_cov_0.881356_g37017_i0", "PRJNA688931", "37230", "167", "0.881356", "1.47186452", "Borreliella", "64895", "Bacteria", "Bacteria", "48.5", "1.09e-4", "", "NR", "WP_231036684.1", "139", "g37017", "i0", "52", "2.73053892215569", "50", "21", "88", "2", "154", "8", "62", "109", "WP_231036684.1 pseudouridine synthase family protein, partial [Borreliella burgdorferi]", "diamond", "456", "48.5", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Borreliaceae", "Borreliella", "Borreliella burgdorferi"], [30125197, "PRJNA688931_P_NODE_6012_length_448_cov_2.127820_g5800_i0", "PRJNA688931", "6012", "448", "2.12782", "9.5326336", "Treponema", "157", "Bacteria", "Bacteria", "55.5", "5.5e-6", "", "NR", "WP_253728023.1", "1643513", "g5800", "i0", "53.8", "1.81473214285714", "52", "23", "34.8", "1", "446", "291", "162", "212", "WP_253728023.1 CAP domain-containing protein [Treponema sp. OMZ 857]", "diamond", "813", "55.8", "0.99462365591397806", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp. OMZ 857"], [30176980, "PRJNA688931_P_NODE_21892_length_219_cov_0.911765_g21679_i0", "PRJNA688931", "21892", "219", "0.911765", "1.99676535", "Spirochaetaceae bacterium", "1898206", "Bacteria", "Bacteria", "49.3", "9.73e-5", "", "NR", "MDR1142748.1", "1898206", "g21679", "i0", "37.3", "1.58904109589041", "67", "41", "91.8", "1", "203", "3", "82", "147", "MDR1142748.1 hypothetical protein [Spirochaetaceae bacterium]", "diamond", "348", "49.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Spirochaetaceae", null, "Spirochaetaceae bacterium"], [30998650, "PRJNA688931_P_NODE_42214_length_163_cov_0.912281_g42001_i0", "PRJNA688931", "42214", "163", "0.912281", "1.48701803", "Treponema sp.", "166", "Bacteria", "Bacteria", "47.8", "2.18e-4", "", "NR", "MBQ7166522.1", "166", "g42001", "i0", "42.6", "7.76687116564417", "54", "31", "99.4", "0", "2", "163", "406", "459", "MBQ7166522.1 ATP-dependent zinc metalloprotease FtsH [Treponema sp.]", "diamond", "1266", "47.8", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [31314618, "PRJNA688931_P_NODE_16835_length_250_cov_1.517413_g16622_i0", "PRJNA688931", "16835", "250", "1.517413", "3.7935325", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "58.9", "7.88e-8", "", "NR", "MCX7023101.1", "2202144", "g16622", "i0", "43.4", "3.588", "76", "40", "91.2", "1", "1", "228", "345", "417", "MCX7023101.1 CAP domain-containing protein [Spirochaetota bacterium]", "diamond", "897", "58.9", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [31915591, "PRJNA688931_P_NODE_29417_length_187_cov_1.500000_g29204_i0", "PRJNA688931", "29417", "187", "1.5", "2.805", "Treponema sp.", "166", "Bacteria", "Bacteria", "64.3", "4.31e-10", "", "NR", "MDR1506793.1", "166", "g29204", "i0", "45.8", "2.82352941176471", "59", "32", "94.7", "0", "183", "7", "169", "227", "MDR1506793.1 aspartate aminotransferase family protein [Treponema sp.]", "diamond", "528", "64.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."], [32105391, "PRJNA688931_P_NODE_12138_length_300_cov_1.290837_g11925_i0", "PRJNA688931", "12138", "300", "1.290837", "3.872511", "Spirochaetota bacterium", "2202144", "Bacteria", "Bacteria", "46.2", "0.00261", "", "NR", "MBN1495173.1", "2202144", "g11925", "i0", "47.4", "0.38", "38", "19", "37", "1", "112", "2", "23", "60", "MBN1495173.1 hypothetical protein [Spirochaetota bacterium]", "diamond", "114", "46.2", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", null, null, null, null, "Spirochaetota bacterium"], [32560240, "PRJNA688931_P_NODE_13719_length_280_cov_1.445887_g13506_i0", "PRJNA688931", "13719", "280", "1.445887", "4.0484836", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "49.3", "9.03e-5", "", "NR", "WP_022932077.1", "163", "g13506", "i0", "45.5", "3.18214285714286", "66", "28", "69.6", "3", "203", "9", "60", "118", "WP_022932077.1 rhodanese-like domain-containing protein [Treponema bryantii]", "diamond", "891", "49.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema bryantii"], [32560262, "PRJNA688931_P_NODE_4739_length_512_cov_2.639309_g4528_i0", "PRJNA688931", "4739", "512", "2.639309", "13.51326208", "Treponema", "157", "Bacteria", "Bacteria", "50.4", "5.87e-4", "", "NR", "WP_303932732.1", "158", "g4528", "i0", "36.2", "3.345703125", "94", "55", "55.1", "3", "21", "302", "113", "201", "WP_303932732.1 CAP domain-containing protein [Treponema denticola]", "diamond", "1713", "50.4", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema denticola"], [32737651, "PRJNA688931_P_NODE_7260_length_403_cov_2.305085_g7047_i0", "PRJNA688931", "7260", "403", "2.305085", "9.28949255", "Spirochaetales bacterium", "2026792", "Bacteria", "Bacteria", "45.8", "0.0175", "", "NR", "MBQ1999626.1", "2026792", "g7047", "i0", "28", "0.796526054590571", "107", "74", "77.4", "2", "372", "61", "338", "444", "MBQ1999626.1 response regulator [Spirochaetales bacterium]", "diamond", "321", "45.8", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", null, null, "Spirochaetales bacterium"], [32811872, "PRJNA688931_P_NODE_29260_length_188_cov_1.115108_g29047_i0", "PRJNA688931", "29260", "188", "1.115108", "2.09640304", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "49.3", "7.93e-5", "", "NR", "MDY2843495.1", "166", "g29047", "i0", "45.9", "2.93617021276596", "61", "28", "97.3", "2", "6", "188", "181", "236", "MDY2843495.1 CAP domain-containing protein [Treponema sp.]", "diamond", "552", "49.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Treponemataceae", "Treponema", "Treponema sp."]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA688931", "p1": "Pseudomonadati", "p2": "Spirochaetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "PRJNA688931", "label": "PRJNA688931", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "diamond", "label": "diamond", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_phylum=Spirochaetota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "results": [{"value": "Spirochaetota", "label": "Spirochaetota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688931&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 283.1423740135506}