{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA675331\" and tax_phylum = \"Bacillota\"", "rows": [[1923829, "PRJNA675331_P_NODE_14302_length_275_cov_1.232673_g14130_i0", "PRJNA675331", "14302", "275", "1.232673", "3.38985075", "Bacteria", "2", "Bacteria", "Bacteria", "126", "2.31e-32", "", "NR", "NLK69503.1", "1898204", "g14130", "i0", "63.3", "16.5927272727273", "90", "33", "98.2", "0", "4", "273", "303", "392", "NLK69503.1 elongation factor Tu [Clostridiaceae bacterium]", "diamond", "4563", "127", "0.992125984251969", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", null, "Clostridiaceae bacterium"], [3198596, "PRJNA675331_P_NODE_10963_length_303_cov_75.169565_g10791_i0", "PRJNA675331", "10963", "303", "75.169565", "227.76378195", "uncultured Streptococcus sp.", "83427", "Bacteria", "Bacteria", "405", "1.88e-108", "", "NTclustered", "gi|2695360723|gb|PP455427.1|", "83427", "g10791", "i0", "92", "120.792079207921", "300", "6", "94", "11", "9", "293", "503", "799", "Uncultured Streptococcus sp. clone def16 16S ribosomal RNA gene, partial sequence", "blastn", "36600", "405", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "uncultured Streptococcus sp."], [5751267, "PRJNA675331_P_NODE_12945_length_284_cov_1.094787_g12773_i0", "PRJNA675331", "12945", "284", "1.094787", "3.10919508", "Neobacillus sp. DY30", "3047871", "Bacteria", "Bacteria", "147", "1.17e-30", "", "NTclustered", "gi|2511398412|gb|CP126093.1|", "3047871", "g12773", "i0", "82.286", "16.306338028169", "175", "25", "60", "5", "105", "275", "164379", "164551", "Neobacillus sp. DY30 chromosome, complete genome", "blastn", "4631", "147", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Neobacillus", "Neobacillus sp. DY30"], [5751328, "PRJNA675331_P_NODE_22805_length_243_cov_0.905882_g22633_i0", "PRJNA675331", "22805", "243", "0.905882", "2.20129326", "Streptococcus mitis", "28037", "Bacteria", "Bacteria", "438", "1.4399999999999996e-118", "", "NTclustered", "gi|2886512733|emb|OZ217346.1|", "28037", "g22633", "i0", "99.177", "99.0740740740741", "243", "2", "100", "0", "1", "243", "173848", "174090", "Streptococcus mitis isolate S. mitis D22 genome assembly, chromosome: 1", "blastn", "24075", "438", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus mitis"], [6272464, "PRJNA675331_P_NODE_15185_length_270_cov_1.436548_g15013_i0", "PRJNA675331", "15185", "270", "1.436548", "3.8786796", "Clostridium", "1485", "Bacteria", "Bacteria", "418", "2.1199999999999993e-112", "", "NTclustered", "gi|2425298477|gb|CP114763.1|", "1492", "g15013", "i0", "95.131", "863.562962962963", "267", "10", "99", "3", "3", "268", "11376", "11640", "Clostridium butyricum strain LV1 chromosome 1, complete sequence", "blastn", "233162", "418", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "Clostridium butyricum"], [10851776, "PRJNA675331_P_NODE_18689_length_250_cov_0.870056_g18517_i0", "PRJNA675331", "18689", "250", "0.870056", "2.17514", "Streptococcus sp. oral taxon 061", "712623", "Bacteria", "Bacteria", "440", "4.1399999999999976e-119", "", "NTclustered", "gi|1866752300|gb|CP058258.1|", "712623", "g18517", "i0", "98.4", "5.996", "250", "4", "100", "0", "1", "250", "284137", "284386", "Streptococcus sp. oral taxon 061 strain F0704 chromosome, complete genome", "blastn", "1499", "440", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus sp. oral taxon 061"], [10851786, "PRJNA675331_P_NODE_20569_length_247_cov_0.885057_g20397_i0", "PRJNA675331", "20569", "247", "0.885057", "2.18609079", "Lactobacillus crispatus", "47770", "Bacteria", "Bacteria", "420", "5.31e-113", "", "NTclustered", "gi|2096299657|gb|CP083392.1|", "47770", "g20397", "i0", "100", "27.5708502024291", "227", "0", "92", "0", "1", "227", "250579", "250353", "Lactobacillus crispatus strain Lc1226 chromosome, complete genome", "blastn", "6810", "420", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Lactobacillaceae", "Lactobacillus", "Lactobacillus crispatus"], [12647843, "PRJNA675331_P_NODE_18410_length_251_cov_0.865169_g18238_i0", "PRJNA675331", "18410", "251", "0.865169", "2.17157419", "Streptococcus", "1301", "Bacteria", "Bacteria", "398", "2.5399999999999994e-106", "", "NTclustered", "gi|1403472623|emb|LS483417.1|", "1313", "g18238", "i0", "95.219", "99.9760956175299", "251", "12", "100", "0", "1", "251", "1155700", "1155950", "Streptococcus pneumoniae strain NCTC11902 genome assembly, chromosome: 1", "blastn", "25094", "398", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus pneumoniae"], [15950529, "PRJNA675331_P_NODE_4813_length_435_cov_1.063536_g4641_i0", "PRJNA675331", "4813", "435", "1.063536", "4.6263816", "Evansella vedderi", "38282", "Bacteria", "Bacteria", "261", "1.34e-81", "", "NR", "WP_307329272.1", "38282", "g4641", "i0", "81.9", "0.993103448275862", "144", "26", "99.3", "0", "434", "3", "244", "387", "WP_307329272.1 beta-glucuronidase [Evansella vedderi]", "diamond", "432", "261", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Evansella", "Evansella vedderi"], [15950548, "PRJNA675331_P_NODE_9253_length_325_cov_1.142857_g9081_i0", "PRJNA675331", "9253", "325", "1.142857", "3.71428525", "Clostridia bacterium", "2044939", "Bacteria", "Bacteria", "162", "2.11e-46", "", "NR", "MDD4685958.1", "2044939", "g9081", "i0", "79", "47.4830769230769", "105", "22", "96.9", "0", "324", "10", "154", "258", "MDD4685958.1 type I glyceraldehyde-3-phosphate dehydrogenase [Clostridia bacterium]", "diamond", "15432", "162", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", null, null, null, "Clostridia bacterium"], [18500028, "PRJNA675331_P_NODE_19595_length_248_cov_2.022857_g19423_i0", "PRJNA675331", "19595", "248", "2.022857", "5.01668536", "Paraclostridium bifermentans", "1490", "Bacteria", "Bacteria", "449", "6.81e-122", "", "NTclustered", "gi|2223161236|gb|CP094933.1|", "1490", "g19423", "i0", "100", "1119.5564516129", "243", "0", "98", "0", "3", "245", "14899", "14657", "Paraclostridium bifermentans strain HD0315_2 chromosome, complete genome", "blastn", "277650", "449", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Peptostreptococcales", "Peptostreptococcaceae", "Paraclostridium", "Paraclostridium bifermentans"], [27239880, "PRJNA675331_P_NODE_20003_length_248_cov_0.880000_g19831_i0", "PRJNA675331", "20003", "248", "0.88", "2.1824", "Clostridiales bacterium", "1898207", "Bacteria", "Bacteria", "64.3", "2.16e-11", "", "NR", "HBV66938.1", "1898207", "g19831", "i0", "46.7", "0.725806451612903", "60", "32", "72.6", "0", "229", "50", "17", "76", "HBV66938.1 hypothetical protein [Clostridiales bacterium]", "diamond", "180", "64.3", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", null, null, "Clostridiales bacterium"], [28293757, "PRJNA675331_P_NODE_4586_length_444_cov_1.326146_g4414_i0", "PRJNA675331", "4586", "444", "1.326146", "5.88808824", "root", "1", "Root_unresolved", "Root_unresolved", "162", "7.64e-46", "", "NR", "MRB67411.1", "1428", "g4414", "i0", "59.4", "5.40540540540541", "133", "47", "89.9", "1", "401", "3", "5", "130", "MRB67411.1 30S ribosomal protein S2 [Bacillus thuringiensis]", "diamond", "2400", "163", "0.993865030674847", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus thuringiensis"], [28408406, "PRJNA675331_P_NODE_19326_length_249_cov_0.875000_g19154_i0", "PRJNA675331", "19326", "249", "0.875", "2.17875", "Oribacterium sinus", "237576", "Bacteria", "Bacteria", "92", "1.84e-19", "", "NR", "WP_304070818.1", "237576", "g19154", "i0", "53", "1.98795180722892", "83", "39", "100", "0", "1", "249", "153", "235", "WP_304070818.1 methyl-accepting chemotaxis protein [Oribacterium sinus]", "diamond", "495", "92", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", "Oribacterium", "Oribacterium sinus"], [28724132, "PRJNA675331_P_NODE_10527_length_308_cov_2.034043_g10355_i0", "PRJNA675331", "10527", "308", "2.034043", "6.26485244", "Veillonella sp.", "1926307", "Bacteria", "Bacteria", "156", "2.9e-47", "", "NR", "WP_366512514.1", "1926307", "g10355", "i0", "73", "1.94805194805195", "100", "27", "97.4", "0", "306", "7", "6", "105", "WP_366512514.1 hypothetical protein [Veillonella sp.]", "diamond", "600", "156", "1", "Bacteria", null, "Bacillati", "Bacillota", "Negativicutes", "Veillonellales", "Veillonellaceae", "Veillonella", "Veillonella sp."], [31218986, "PRJNA675331_P_NODE_13035_length_283_cov_1.114286_g12863_i0", "PRJNA675331", "13035", "283", "1.114286", "3.15342938", "Evansella sp. LMS18", "2924033", "Bacteria", "Bacteria", "44.3", "0.0172", "", "NR", "WP_255244507.1", "2924033", "g12863", "i0", "33.8", "0.816254416961131", "77", "51", "81.6", "0", "4", "234", "325", "401", "WP_255244507.1 asparagine synthase-related protein [Evansella sp. LMS18]", "diamond", "231", "44.3", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Evansella", "Evansella sp. LMS18"], [31326014, "PRJNA675331_P_NODE_16255_length_263_cov_1.215789_g16083_i0", "PRJNA675331", "16255", "263", "1.215789", "3.19752507", "Bacillati", "1783272", "Bacteria", "Bacteria", "43.5", "0.0252", "", "NR", "WP_010246532.1", "35830", "g16083", "i0", "37.9", "1.6425855513308", "66", "37", "73", "2", "69", "260", "213", "276", "WP_010246532.1 hypothetical protein [Acetivibrio cellulolyticus]", "diamond", "432", "43.9", "0.990888382687927", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", "Acetivibrio", "Acetivibrio cellulolyticus"], [31958628, "PRJNA675331_P_NODE_8617_length_335_cov_0.881679_g8445_i0", "PRJNA675331", "8617", "335", "0.881679", "2.95362465", "Bacillati", "1783272", "Bacteria", "Bacteria", "111", "7.090000000000001e-26", "", "NR", "MEE3392634.1", "1898203", "g8445", "i0", "55.6", "4.38805970149254", "81", "36", "72.5", "0", "243", "1", "6", "86", "MEE3392634.1 glutamine synthetase III [Lachnospiraceae bacterium]", "diamond", "1470", "111", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", null, "Lachnospiraceae bacterium"], [32041836, "PRJNA675331_P_NODE_1778_length_685_cov_1.570261_g1617_i0", "PRJNA675331", "1778", "685", "1.570261", "10.75628785", "Clostridia bacterium", "2044939", "Bacteria", "Bacteria", "47.4", "0.0393", "", "NR", "MBQ3461596.1", "2044939", "g1617", "i0", "26.9", "2.19416058394161", "167", "109", "67.9", "4", "475", "11", "4766", "4931", "MBQ3461596.1 cadherin-like beta sandwich domain-containing protein [Clostridia bacterium]", "diamond", "1503", "47.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", null, null, null, "Clostridia bacterium"], [32105037, "PRJNA675331_P_NODE_7118_length_364_cov_1.054983_g6946_i0", "PRJNA675331", "7118", "364", "1.054983", "3.84013812", "Lachnospiraceae bacterium", "1898203", "Bacteria", "Bacteria", "47", "0.00446", "", "NR", "MBO5336739.1", "1898203", "g6946", "i0", "30.6", "0.593406593406593", "72", "50", "59.3", "0", "93", "308", "404", "475", "MBO5336739.1 glucosyltransferase domain-containing protein [Lachnospiraceae bacterium]", "diamond", "216", "47", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", null, "Lachnospiraceae bacterium"], [32799878, "PRJNA675331_P_NODE_23620_length_242_cov_0.911243_g23448_i0", "PRJNA675331", "23620", "242", "0.911243", "2.20520806", "Staphylococcus aureus", "1280", "Bacteria", "Bacteria", "56.2", "3.96e-7", "", "NR", "WP_275218940.1", "1280", "g23448", "i0", "84.6", "0.322314049586777", "26", "4", "32.2", "0", "186", "109", "3", "28", "WP_275218940.1 hypothetical protein, partial [Staphylococcus aureus]", "diamond", "78", "56.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus aureus"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA675331", "p1": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota", "results": [{"value": "PRJNA675331", "label": "PRJNA675331", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA675331&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA675331", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 402.2604080091696}