{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA643700\" and tax_phylum = \"Nematoda\"", "rows": [[1894303, "PRJNA643700_P_NODE_227442_length_255_cov_4.199029_g225886_i0", "PRJNA643700", "227442", "255", "4.199029", "10.70752395", "Strongyloides ratti", "34506", "Nematoda", "Nematoda", "52.8", "0.023", "", "NTclustered", "gi|1376134401|ref|XM_024647160.1|", "34506", "g225886", "i0", "100", "0.109803921568627", "28", "0", "11", "0", "221", "248", "141", "168", "Strongyloides ratti N-alpha-acetyltransferase 35, NatC auxiliary subunit (SRAE_1000033900), partial mRNA", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides ratti"], [4445766, "PRJNA643700_P_NODE_205224_length_274_cov_1.155556_g203668_i0", "PRJNA643700", "205224", "274", "1.155556", "3.16622344", "Caenorhabditis elegans", "6239", "Nematoda", "Nematoda", "52.8", "0.025", "", "NTclustered", "gi|687865582|emb|LK927621.1|", "6239", "g203668", "i0", "100", "0.204379562043796", "28", "0", "10", "0", "15", "42", "136086", "136059", "Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000084", "blastn", "56", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis elegans"], [15920883, "PRJNA643700_P_NODE_111733_length_393_cov_2.485465_g110179_i0", "PRJNA643700", "111733", "393", "2.485465", "9.76787745", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "52.8", "0.038", "", "NTclustered", "gi|690020008|emb|LM527523.1|", "174720", "g110179", "i0", "100", "0.0712468193384224", "28", "0", "7", "0", "121", "148", "328", "301", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000112", "blastn", "28", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [15920966, "PRJNA643700_P_NODE_234053_length_251_cov_1.029703_g232497_i0", "PRJNA643700", "234053", "251", "1.029703", "2.58455453", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "52.8", "0.023", "", "NTclustered", "gi|687022698|emb|LM525612.1|", "174720", "g232497", "i0", "92.105", "0.151394422310757", "38", "2", "15", "1", "37", "74", "40236", "40200", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000022", "blastn", "38", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [17196138, "PRJNA643700_P_NODE_38234_length_660_cov_2.746318_g36885_i0", "PRJNA643700", "38234", "660", "2.746318", "18.1256988", "Caenorhabditis elegans", "6239", "Nematoda", "Nematoda", "54.7", "0.018", "", "NTclustered", "gi|351061203|emb|FO081081.1|", "6239", "g36885", "i0", "100", "0.0878787878787879", "29", "0", "4", "0", "203", "231", "36070", "36042", "Caenorhabditis elegans Cosmid F54D7, complete sequence", "blastn", "58", "54.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis elegans"], [24844535, "PRJNA643700_P_NODE_331940_length_194_cov_1.075862_g330384_i0", "PRJNA643700", "331940", "194", "1.075862", "2.08717228", "Strongyloides papillosus", "174720", "Nematoda", "Nematoda", "52.8", "0.017", "", "NTclustered", "gi|690018472|emb|LM525710.1|", "174720", "g330384", "i0", "100", "0.288659793814433", "28", "0", "14", "0", "93", "120", "77094", "77067", "Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000106", "blastn", "56", "52.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Strongyloididae", "Strongyloides", "Strongyloides papillosus"], [26923117, "PRJNA643700_P_NODE_249102_length_240_cov_1.633508_g247546_i0", "PRJNA643700", "249102", "240", "1.633508", "3.9204192", "Anisakis simplex", "6269", "Nematoda", "Nematoda", "42.4", "0.0091", "", "NR", "VDK78339.1", "6269", "g247546", "i0", "64.1", "0.4875", "39", "13", "47.5", "1", "1", "114", "44", "82", "VDK78339.1 unnamed protein product [Anisakis simplex]", "diamond", "117", "42.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Anisakidae", "Anisakis", "Anisakis simplex"], [27061911, "PRJNA643700_P_NODE_387422_length_169_cov_0.866667_g385866_i0", "PRJNA643700", "387422", "169", "0.866667", "1.46466723", "Onchocercidae", "6296", "Nematoda", "Nematoda", "45.8", "0.00114", "", "NR", "CDQ02964.2", "6279", "g385866", "i0", "48.7", "5.53846153846154", "39", "18", "69.2", "1", "17", "133", "425", "461", "CDQ02964.2 Bm7449, isoform b [Brugia malayi]", "diamond", "936", "45.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Onchocercidae", "Brugia", "Brugia malayi"], [27207475, "PRJNA643700_P_NODE_424402_length_162_cov_0.920354_g422846_i0", "PRJNA643700", "424402", "162", "0.920354", "1.49097348", "Caenorhabditis briggsae", "6238", "Nematoda", "Nematoda", "47.4", "2.86e-4", "", "NR", "XP_002635469.2", "6238", "g422846", "i0", "85.7", "2.57407407407407", "21", "3", "38.9", "0", "99", "161", "745", "765", "XP_002635469.2 Protein CBG08763 [Caenorhabditis briggsae]", "diamond", "417", "47.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"], [27788611, "PRJNA643700_P_NODE_101304_length_414_cov_3.389041_g99751_i0", "PRJNA643700", "101304", "414", "3.389041", "14.03062974", "Trichostrongylidae", "6315", "Nematoda", "Nematoda", "57.8", "1.24e-6", "", "NR", "CDJ94991.1", "6289", "g99751", "i0", "42.9", "4.3768115942029", "70", "34", "46.4", "2", "146", "337", "409", "478", "CDJ94991.1 RNA-directed DNA polymerase (reverse transcriptase) domain containing protein [Haemonchus contortus]", "diamond", "1812", "57.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Trichostrongylidae", "Haemonchus", "Haemonchus contortus"], [28344526, "PRJNA643700_P_NODE_411306_length_164_cov_2.260870_g409750_i0", "PRJNA643700", "411306", "164", "2.26087", "3.7078268", "Aphelenchoides besseyi", "269767", "Nematoda", "Nematoda", "53.5", "1.98e-6", "", "NR", "KAI6180585.1", "269767", "g409750", "i0", "41.5", "0.969512195121951", "53", "31", "97", "0", "160", "2", "557", "609", "KAI6180585.1 Alpha-galactosidase [Aphelenchoides besseyi]", "diamond", "159", "53.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Aphelenchoididae", "Aphelenchoides", "Aphelenchoides besseyi"], [30049499, "PRJNA643700_P_NODE_372411_length_175_cov_1.380952_g370855_i0", "PRJNA643700", "372411", "175", "1.380952", "2.416666", "Ancylostoma ceylanicum", "53326", "Nematoda", "Nematoda", "40.4", "0.0477", "", "NR", "EYC22546.1", "53326", "g370855", "i0", "46.2", "0.668571428571429", "39", "19", "63.4", "1", "47", "157", "60", "98", "EYC22546.1 hypothetical protein Y032_0017g3413 [Ancylostoma ceylanicum]", "diamond", "117", "40.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Ancylostomatidae", "Ancylostoma", "Ancylostoma ceylanicum"], [31250296, "PRJNA643700_P_NODE_199095_length_279_cov_2.134783_g197539_i0", "PRJNA643700", "199095", "279", "2.134783", "5.95604457", "Caenorhabditis briggsae", "6238", "Nematoda", "Nematoda", "43.9", "0.0202", "", "NR", "UMM34810.1", "6238", "g197539", "i0", "34.4", "1.37634408602151", "64", "42", "68.8", "0", "210", "19", "65", "128", "UMM34810.1 hypothetical protein L5515_007713 [Caenorhabditis briggsae]", "diamond", "384", "43.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"], [32306880, "PRJNA643700_P_NODE_140979_length_345_cov_1.756757_g139424_i0", "PRJNA643700", "140979", "345", "1.756757", "6.06081165", "root", "1", "Root_unresolved", "Root_unresolved", "218", "1.79e-67", "", "NR", "UMM35145.1", "6238", "g139424", "i0", "91.2", "492.321739130435", "114", "10", "99.1", "0", "3", "344", "206", "319", "UMM35145.1 hypothetical protein L5515_007902 [Caenorhabditis briggsae]", "diamond", "169851", "220", "0.990909090909091", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis briggsae"], [32370048, "PRJNA643700_P_NODE_284079_length_218_cov_2.124260_g282523_i0", "PRJNA643700", "284079", "218", "2.12426", "4.6308868", "Opisthokonta", "33154", "Nematoda", "Nematoda", "65.1", "3.09e-10", "", "NR", "EFP04527.1", "31234", "g282523", "i0", "55.3", "3.6743119266055", "47", "21", "64.7", "0", "214", "74", "207", "253", "EFP04527.1 hypothetical protein CRE_31234 [Caenorhabditis remanei]", "diamond", "801", "65.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Nematoda", "Chromadorea", "Rhabditida", "Rhabditidae", "Caenorhabditis", "Caenorhabditis remanei"]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA643700", "p1": "Nematoda"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda", "results": [{"value": "PRJNA643700", "label": "PRJNA643700", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Nematoda", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA643700&tax_phylum=Nematoda", "results": [{"value": "Nematoda", "label": "Nematoda", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA643700", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 356.47858001175337}