{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA640143\", tax_clade = \"PVC group\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[1885883, "PRJNA640143_S_NODE_13922_length_233_cov_3.637755_g13712_i0", "PRJNA640143", "13922", "233", "3.637755", "8.47596915", "uncultured Verrucomicrobiae bacterium", "412056", "Bacteria", "Bacteria", "219", "1.94e-52", "", "NTclustered", "gi|2874253779|emb|OY969763.1|", "412056", "g13712", "i0", "88.827", "37.931330472103", "179", "19", "76", "1", "34", "211", "3833600", "3833422", "MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1", "blastn", "8838", "219", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "uncultured Verrucomicrobiae bacterium"], [15912915, "PRJNA640143_S_NODE_29033_length_161_cov_3.443548_g28823_i0", "PRJNA640143", "29033", "161", "3.443548", "5.54411228", "Congregicoccus parvus", "3081749", "Bacteria", "Bacteria", "56.5", "0.001", "", "NTclustered", "gi|2599616993|dbj|AP028972.1|", "3081749", "g28823", "i0", "92.308", "0.242236024844721", "39", "3", "24", "0", "99", "137", "4161834", "4161872", "Opitutales bacterium ASA1 DNA, complete genome", "blastn", "39", "56.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Alterococcaceae", "Congregicoccus", "Congregicoccus parvus"], [22286871, "PRJNA640143_S_NODE_17198_length_211_cov_1.959770_g16988_i0", "PRJNA640143", "17198", "211", "1.95977", "4.1351147", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "125", "5.38e-32", "", "NR", "MCC6234743.1", "2026801", "g16988", "i0", "85.7", "0.995260663507109", "70", "10", "99.5", "0", "211", "2", "219", "288", "MCC6234743.1 acyl-CoA carboxylase subunit beta [Verrucomicrobiales bacterium]", "diamond", "210", "125", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [30807754, "PRJNA640143_S_NODE_30694_length_156_cov_1.310924_g30484_i0", "PRJNA640143", "30694", "156", "1.310924", "2.04504144", "Opitutaceae bacterium", "2006848", "Bacteria", "Bacteria", "89.4", "2.3e-19", "", "NR", "MBP7140831.1", "2006848", "g30484", "i0", "67.3", "2", "52", "17", "100", "0", "1", "156", "310", "361", "MBP7140831.1 multicopper oxidase domain-containing protein [Opitutaceae bacterium]", "diamond", "312", "89.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", null, "Opitutaceae bacterium"], [32483999, "PRJNA640143_S_NODE_28959_length_162_cov_1.240000_g28749_i0", "PRJNA640143", "28959", "162", "1.24", "2.0088", "Prosthecobacter sp.", "1965333", "Bacteria", "Bacteria", "39.7", "0.0399", "", "NR", "MFM7606245.1", "1965333", "g28749", "i0", "90", "0.37037037037037", "20", "2", "37", "0", "160", "101", "65", "84", "MFM7606245.1 hypothetical protein [Prosthecobacter sp.]", "diamond", "60", "39.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Prosthecobacter", "Prosthecobacter sp."], [32673061, "PRJNA640143_S_NODE_7500_length_308_cov_2.509225_g7290_i0", "PRJNA640143", "7500", "308", "2.509225", "7.728413", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "43.1", "0.0469", "", "NR", "MBU6300000.1", "2026799", "g7290", "i0", "45.6", "0.555194805194805", "57", "26", "50.6", "1", "81", "236", "32", "88", "MBU6300000.1 alpha/beta fold hydrolase [Verrucomicrobiota bacterium]", "diamond", "171", "43.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"]], "truncated": false, "filtered_table_rows_count": 6, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA640143", "p1": "PVC group", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA640143", "label": "PRJNA640143", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA640143&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 244.72299799890607}