{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA635874\", tax_kingdom = \"Pseudomonadati\" and tax_phylum = \"Bdellovibrionota\"", "rows": [[8261475, "PRJNA635874_P_NODE_71207_length_242_cov_0.911243_g71060_i0", "PRJNA635874", "71207", "242", "0.911243", "2.20520806", "Bdellovibrio svalbardensis", "2972972", "Bacteria", "Bacteria", "98.6", "2.19e-23", "", "NR", "WP_277578550.1", "2972972", "g71060", "i0", "58.2", "1.95867768595041", "79", "33", "97.9", "0", "240", "4", "94", "172", "WP_277578550.1 YggS family pyridoxal phosphate-dependent enzyme [Bdellovibrio svalbardensis]", "diamond", "474", "98.6", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio svalbardensis"], [15910266, "PRJNA635874_P_NODE_36993_length_278_cov_1.497561_g36846_i0", "PRJNA635874", "36993", "278", "1.497561", "4.16321958", "Bdellovibrio sp. ZAP7", "2231053", "Bacteria", "Bacteria", "318", "2.2899999999999995e-82", "", "NTclustered", "gi|1700693790|gb|CP030082.1|", "2231053", "g36846", "i0", "87.868", "0.97841726618705", "272", "31", "97", "2", "2", "272", "810475", "810745", "Bdellovibrio sp. ZAP7 chromosome, complete genome", "blastn", "272", "318", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. ZAP7"], [22284536, "PRJNA635874_P_NODE_38638_length_273_cov_1.255000_g38491_i0", "PRJNA635874", "38638", "273", "1.255", "3.42615", "Bacteriovoracia bacterium", "3058048", "Bacteria", "Bacteria", "92", "6.91e-20", "", "NR", "MFP5384796.1", "3058048", "g38491", "i0", "55.9", "2.17582417582418", "68", "30", "74.7", "0", "271", "68", "252", "319", "MFP5384796.1 polyhydroxybutyrate depolymerase [Bacteriovoracia bacterium]", "diamond", "594", "92", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", null, null, null, "Bacteriovoracia bacterium"], [24834077, "PRJNA635874_P_NODE_48120_length_251_cov_0.865169_g47973_i0", "PRJNA635874", "48120", "251", "0.865169", "2.17157419", "Pigmentibacter ruber", "2683196", "Bacteria", "Bacteria", "52.8", "0.023", "", "NTclustered", "gi|2651759839|dbj|AP029159.1|", "2683196", "g47973", "i0", "100", "0.111553784860558", "28", "0", "11", "0", "144", "171", "859799", "859772", "Pigmentibacter ruber GTC16762 DNA, complete genome", "blastn", "28", "52.8", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Silvanigrellales", "Silvanigrellaceae", "Pigmentibacter", "Pigmentibacter ruber"], [25380846, "PRJNA635874_P_NODE_37340_length_277_cov_1.343137_g37193_i0", "PRJNA635874", "37340", "277", "1.343137", "3.72048949", "Bdellovibrio", "958", "Bacteria", "Bacteria", "335", "2.2599999999999993e-87", "", "NTclustered", "gi|2801803968|gb|CP169237.1|", "959", "g37193", "i0", "88.686", "7.65703971119134", "274", "31", "99", "0", "4", "277", "2122284", "2122557", "Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome", "blastn", "2121", "335", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio bacteriovorus"], [28167394, "PRJNA635874_P_NODE_73965_length_241_cov_0.916667_g73818_i0", "PRJNA635874", "73965", "241", "0.916667", "2.20916747", "Bacteria", "2", "Bacteria", "Bacteria", "101", "7.84e-24", "", "NR", "MAV91743.1", "2026715", "g73818", "i0", "49.4", "1.96680497925311", "79", "40", "98.3", "0", "239", "3", "123", "201", "MAV91743.1 hypothetical protein [Pseudobdellovibrionaceae bacterium]", "diamond", "474", "101", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", null, "Pseudobdellovibrionaceae bacterium"], [28344236, "PRJNA635874_P_NODE_53566_length_248_cov_0.880000_g53419_i0", "PRJNA635874", "53566", "248", "0.88", "2.1824", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "77.4", "2.43e-14", "", "NR", "HAG92065.1", "2053517", "g53419", "i0", "43.7", "1.05241935483871", "87", "44", "99.2", "2", "1", "246", "66", "152", "HAG92065.1 hypothetical protein [Bdellovibrionales bacterium]", "diamond", "261", "77.4", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [28596985, "PRJNA635874_P_NODE_61647_length_245_cov_0.895349_g61500_i0", "PRJNA635874", "61647", "245", "0.895349", "2.19360505", "Bdellovibrio sp. HCB2-146", "3394362", "Bacteria", "Bacteria", "143", "1.61e-37", "", "NR", "WP_413940527.1", "3394362", "g61500", "i0", "86.1", "0.96734693877551", "79", "11", "96.7", "0", "2", "238", "291", "369", "WP_413940527.1 transglycosylase domain-containing protein [Bdellovibrio sp. HCB2-146]", "diamond", "237", "143", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio sp. HCB2-146"], [28660137, "PRJNA635874_P_NODE_53947_length_248_cov_0.880000_g53800_i0", "PRJNA635874", "53947", "248", "0.88", "2.1824", "Bdellovibrionota bacterium", "3034175", "Bacteria", "Bacteria", "82", "5.74e-16", "", "NR", "HEY8279360.1", "3034175", "g53800", "i0", "80.4", "1.23387096774194", "51", "10", "61.7", "0", "248", "96", "525", "575", "HEY8279360.1 arginine--tRNA ligase [Bdellovibrionota bacterium]", "diamond", "306", "82", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", null, null, null, null, "Bdellovibrionota bacterium"], [30744533, "PRJNA635874_P_NODE_51534_length_249_cov_0.875000_g51387_i0", "PRJNA635874", "51534", "249", "0.875", "2.17875", "Bdellovibrionales bacterium", "2053517", "Bacteria", "Bacteria", "56.6", "5.24e-7", "", "NR", "MFN8790833.1", "2053517", "g51387", "i0", "64.9", "0.44578313253012", "37", "13", "44.6", "0", "13", "123", "158", "194", "MFN8790833.1 hypothetical protein [Bdellovibrionales bacterium]", "diamond", "111", "56.6", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", null, null, "Bdellovibrionales bacterium"], [31073013, "PRJNA635874_P_NODE_55375_length_248_cov_0.880000_g55228_i0", "PRJNA635874", "55375", "248", "0.88", "2.1824", "Micavibrio", "213485", "Bacteria", "Bacteria", "68.9", "2.3e-11", "", "NR", "PZO79293.1", "349221", "g55228", "i0", "49.3", "2.58870967741935", "69", "33", "83.5", "1", "10", "216", "383", "449", "PZO79293.1 MAG: hypothetical protein DI626_11630 [Micavibrio aeruginosavorus]", "diamond", "642", "68.9", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Micavibrio", "Micavibrio aeruginosavorus"], [31629640, "PRJNA635874_P_NODE_13416_length_412_cov_1.197640_g13269_i0", "PRJNA635874", "13416", "412", "1.19764", "4.9342768", "Silvanigrellaceae bacterium", "2654442", "Bacteria", "Bacteria", "132", "4.9e-37", "", "NR", "MBX9702949.1", "2654442", "g13269", "i0", "70.8", "0.699029126213592", "96", "27", "69.9", "1", "3", "290", "28", "122", "MBX9702949.1 hypothetical protein [Silvanigrellaceae bacterium]", "diamond", "288", "132", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Silvanigrellales", "Silvanigrellaceae", null, "Silvanigrellaceae bacterium"], [31692828, "PRJNA635874_P_NODE_72217_length_241_cov_0.916667_g72070_i0", "PRJNA635874", "72217", "241", "0.916667", "2.20916747", "Oligoflexales bacterium", "2687297", "Bacteria", "Bacteria", "43.5", "0.0177", "", "NR", "MFK7872243.1", "2687297", "g72070", "i0", "37.1", "0.871369294605809", "70", "41", "85.9", "2", "8", "214", "6", "73", "MFK7872243.1 enoyl-ACP reductase [Oligoflexales bacterium]", "diamond", "210", "43.5", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", null, null, "Oligoflexales bacterium"], [32116749, "PRJNA635874_P_NODE_35698_length_282_cov_1.473684_g35551_i0", "PRJNA635874", "35698", "282", "1.473684", "4.15578888", "Halobacteriovorax", "1652133", "Bacteria", "Bacteria", "128", "3.84e-33", "", "NR", "WP_096910288.1", "97084", "g35551", "i0", "63", "1.96808510638298", "92", "34", "97.9", "0", "277", "2", "219", "310", "WP_096910288.1 trans-sulfuration enzyme family protein [Halobacteriovorax marinus]", "diamond", "555", "128", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bacteriovoracia", "Bacteriovoracales", "Halobacteriovoraceae", "Halobacteriovorax", "Halobacteriovorax marinus"], [32167614, "PRJNA635874_P_NODE_40658_length_267_cov_1.190722_g40511_i0", "PRJNA635874", "40658", "267", "1.190722", "3.17922774", "Oligoflexus sp.", "1971216", "Bacteria", "Bacteria", "85.5", "1.23e-18", "", "NR", "WP_324954760.1", "1971216", "g40511", "i0", "68.4", "0.640449438202247", "57", "18", "64", "0", "53", "223", "94", "150", "WP_324954760.1 hypothetical protein [Oligoflexus sp.]", "diamond", "171", "85.5", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Oligoflexia", "Oligoflexales", "Oligoflexaceae", "Oligoflexus", "Oligoflexus sp."], [32483954, "PRJNA635874_P_NODE_44939_length_254_cov_1.685083_g44792_i0", "PRJNA635874", "44939", "254", "1.685083", "4.28011082", "Bdellovibrio bacteriovorus", "959", "Bacteria", "Bacteria", "43.5", "0.0228", "", "NR", "WP_253715556.1", "959", "g44792", "i0", "36", "0.885826771653543", "75", "40", "88.6", "1", "12", "236", "389", "455", "WP_253715556.1 BatD family protein [Bdellovibrio bacteriovorus]", "diamond", "225", "43.5", "1", "Bacteria", null, "Pseudomonadati", "Bdellovibrionota", "Bdellovibrionia", "Bdellovibrionales", "Pseudobdellovibrionaceae", "Bdellovibrio", "Bdellovibrio bacteriovorus"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA635874", "p1": "Pseudomonadati", "p2": "Bdellovibrionota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "PRJNA635874", "label": "PRJNA635874", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_phylum=Bdellovibrionota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "results": [{"value": "Bdellovibrionota", "label": "Bdellovibrionota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA635874&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 494.99393699807115}