{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA597223\", tax_clade = \"PVC group\" and tax_phylum = \"Chlamydiota\"", "rows": [[569641, "PRJNA597223_P_NODE_9881_length_551_cov_138.372093_g8241_i0", "PRJNA597223", "9881", "551", "138.372093", "762.43023243", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "662", "0", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g8241", "i0", "89.326", "139.693284936479", "534", "47", "96", "8", "2", "528", "654873", "655403", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "76971", "662", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [10773334, "PRJNA597223_P_NODE_3449_length_927_cov_15.553812_g2478_i0", "PRJNA597223", "3449", "927", "15.553812", "144.18383724", "uncultured Parachlamydiaceae bacterium", "464461", "Bacteria", "Bacteria", "259", "5.1400000000000006e-64", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g2478", "i0", "82.051", "41.2308522114347", "312", "48", "33", "8", "620", "927", "2059246", "2059553", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "38221", "259", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [10773748, "PRJNA597223_P_NODE_72009_length_168_cov_1.000000_g70163_i0", "PRJNA597223", "72009", "168", "1", "1.68", "Chlamydia sp. 12-3998_AO002", "1608579", "Bacteria", "Bacteria", "150", "4.86e-32", "", "NTclustered", "gi|795784157|emb|LN810465.1|", "1608579", "g70163", "i0", "82.941", "244.690476190476", "170", "25", "100", "4", "1", "168", "258", "91", "Chlamydia sp. 12-3998_AO002 partial 23S rRNA gene, isolate 12-3998_AO002", "blastn", "41108", "150", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia sp. 12-3998_AO002"], [15168804, "PRJNA597223_P_NODE_27672_length_291_cov_5.070312_g25826_i0", "PRJNA597223", "27672", "291", "5.070312", "14.75460792", "Chlamydiia", "204429", "Bacteria", "Bacteria", "257", "5.32e-64", "", "NTclustered", "gi|2874253688|emb|OY969414.1|", "174324", "g25826", "i0", "85.375", "84.9381443298969", "253", "31", "86", "6", "41", "291", "2366263", "2366015", "MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1", "blastn", "24717", "259", "0.992277992277992", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "uncultured Chlamydiales bacterium"], [18992250, "PRJNA597223_P_NODE_86235_length_151_cov_3.413793_g84389_i0", "PRJNA597223", "86235", "151", "3.413793", "5.15482743", "Parachlamydiales", "1963360", "Bacteria", "Bacteria", "95.3", "2.02e-15", "", "NTclustered", "gi|194594624|gb|EU662269.1|", "112235", "g84389", "i0", "92.424", "10.6026490066225", "66", "5", "44", "0", "6", "71", "1215", "1280", "Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence", "blastn", "1601", "95.3", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Neochlamydia", "Neochlamydia hartmannellae"], [21542535, "PRJNA597223_P_NODE_26977_length_296_cov_6.704981_g25131_i0", "PRJNA597223", "26977", "296", "6.704981", "19.84674376", "Parachlamydia", "83551", "Bacteria", "Bacteria", "444", "3.88e-120", "", "NTclustered", "gi|470491594|ref|NR_077046.1|", "83552", "g25131", "i0", "93.878", "159.148648648649", "294", "18", "99", "0", "3", "296", "2946", "2653", "Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence", "blastn", "47108", "444", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Parachlamydia", "Parachlamydia acanthamoebae"], [22817822, "PRJNA597223_P_NODE_15298_length_428_cov_8.399491_g13502_i0", "PRJNA597223", "15298", "428", "8.399491", "35.94982148", "Chlamydiia", "204429", "Bacteria", "Bacteria", "516", "1.22e-141", "", "NTclustered", "gi|2874253811|emb|OY969795.1|", "464461", "g13502", "i0", "89.398", "141.588785046729", "415", "37", "96", "7", "2", "412", "2060622", "2061033", "MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1", "blastn", "60600", "516", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "uncultured Parachlamydiaceae bacterium"], [23521378, "PRJNA597223_P_NODE_35359_length_245_cov_2.585714_g33513_i0", "PRJNA597223", "35359", "245", "2.585714", "6.3349993", "Candidatus Protochlamydia amoebophila", "362787", "Bacteria", "Bacteria", "311", "3.3000000000000003e-80", "", "NTclustered", "gi|1691252667|emb|BX908798.2|", "264201", "g33513", "i0", "89.712", "37.1387755102041", "243", "25", "99", "0", "2", "244", "2154021", "2153779", "Candidatus Protochlamydia amoebophila UWE25 complete genome", "blastn", "9099", "311", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia amoebophila"], [29763755, "PRJNA597223_P_NODE_19651_length_366_cov_2.870091_g17820_i0", "PRJNA597223", "19651", "366", "2.870091", "10.50453306", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "75.5", "5.14e-13", "", "NR", "HEV7737122.1", "2047757", "g17820", "i0", "66.1", "2.29508196721311", "56", "19", "45.9", "0", "199", "366", "137", "192", "HEV7737122.1 reverse transcriptase family protein [Chlamydiales bacterium]", "diamond", "840", "75.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [31944612, "PRJNA597223_P_NODE_52017_length_193_cov_2.012658_g50171_i0", "PRJNA597223", "52017", "193", "2.012658", "3.88442994", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "42", "0.0149", "", "NR", "MDR3624086.1", "2047757", "g50171", "i0", "84.6", "0.823834196891192", "26", "4", "40.4", "0", "185", "108", "41", "66", "MDR3624086.1 histone [Chlamydiales bacterium]", "diamond", "159", "42", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA597223", "p1": "PVC group", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA597223", "label": "PRJNA597223", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "blastn", "label": "blastn", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA597223&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 444.57821600008174}