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"diamond", "69", "44.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28184449, "PRJNA564013_P_NODE_357606_length_193_cov_3.833333_g354754_i0", "PRJNA564013", "357606", "193", "3.833333", "7.39833269", "Arcobacter suis", "1278212", "Bacteria", "Bacteria", "58.5", "2.45e-8", "", "NR", "WP_118885857.1", "1278212", "g354754", "i0", "48.2", "0.870466321243523", "56", "29", "87", "0", "25", "192", "107", "162", "WP_118885857.1 hypothetical protein [Arcobacter suis]", "diamond", "168", "58.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter suis"], [28247689, "PRJNA564013_P_NODE_46686_length_574_cov_21.998051_g43940_i0", "PRJNA564013", "46686", "574", "21.998051", "126.26881274", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "56.6", "3.49e-7", "", "NR", "GAA9043165.1", "210", "g43940", "i0", "68.6", "0.684668989547038", "35", "11", "18.3", "0", "48", "152", "16", "50", "GAA9043165.1 hypothetical protein Kyoto184A_02530 [Helicobacter pylori]", "diamond", "393", "56.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28311071, "PRJNA564013_P_NODE_358106_length_193_cov_2.431818_g355254_i0", "PRJNA564013", "358106", "193", "2.431818", "4.69340874", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "57.4", "4.09e-9", "", "NR", "GAA8703816.1", "210", "g355254", "i0", "71.4", "1.13471502590674", "35", "10", "54.4", "0", "50", "154", "5", "39", "GAA8703816.1 hypothetical protein Kyoto145A_3440 [Helicobacter pylori]", "diamond", "219", "57.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28437372, 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"0.99462365591397806", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter jejuni"], [28469044, "PRJNA564013_P_NODE_350366_length_198_cov_3.591241_g347514_i0", "PRJNA564013", "350366", "198", "3.591241", "7.11065718", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "43.5", "0.0011", "", "NR", "GAA9129654.1", "210", "g347514", "i0", "50", "0.848484848484849", "56", "17", "77.3", "2", "27", "179", "7", "56", "GAA9129654.1 hypothetical protein Kyoto190A_1920 [Helicobacter pylori]", "diamond", "168", "43.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28640659, "PRJNA564013_P_NODE_170007_length_333_cov_246.547794_g167157_i0", "PRJNA564013", "170007", "333", "246.547794", "821.00415402", "Bacteria", "2", "Bacteria", "Bacteria", "66.6", "1.95e-11", "", "NR", "MDU9799813.1", "210", "g167157", "i0", "80", "1.8018018018018", "40", "8", "36", "0", "120", "1", "1", "40", "MDU9799813.1 hypothetical protein [Helicobacter pylori]", "diamond", "600", "66.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28798177, "PRJNA564013_P_NODE_66807_length_492_cov_150.213457_g64002_i0", "PRJNA564013", "66807", "492", "150.213457", "739.05020844", "Bacteria", "2", "Bacteria", "Bacteria", "56.2", "8.65e-7", "", "NR", "MDU9799813.1", "210", "g64002", "i0", "100", "0.280487804878049", "23", "0", "14", "0", "1", "69", "2", "24", "MDU9799813.1 hypothetical protein [Helicobacter pylori]", "diamond", "138", "56.2", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [29068922, "PRJNA564013_P_NODE_294908_length_228_cov_14.610778_g292056_i0", "PRJNA564013", "294908", "228", "14.610778", "33.31257384", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "40", "0.0251", "", "NR", "GAA6875668.1", "210", "g292056", "i0", "93.1", "0.381578947368421", "29", "2", "38.2", "0", "93", "7", "11", "39", "GAA6875668.1 hypothetical protein Kyoto206A_4490 [Helicobacter pylori]", "diamond", "87", "40", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30047486, "PRJNA564013_P_NODE_368291_length_181_cov_15.391667_g365439_i0", "PRJNA564013", "368291", "181", "15.391667", "27.85891727", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "39.3", "0.0421", "", "NR", "GAA8930966.1", "210", "g365439", "i0", "55.6", "0.447513812154696", "27", "12", "44.8", "0", "137", "57", "1", "27", "GAA8930966.1 hypothetical protein Kyoto166A_4300 [Helicobacter pylori]", "diamond", "81", "39.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30251253, "PRJNA564013_P_NODE_110712_length_394_cov_7.768769_g107871_i0", "PRJNA564013", "110712", "394", "7.768769", "30.60894986", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "50.8", "9.94e-6", "", "NR", "MBQ7134643.1", "205", "g107871", "i0", "64.7", "0.49492385786802", "34", "12", "25.9", "0", "270", "371", "9", "42", "MBQ7134643.1 BspA family leucine-rich repeat surface protein [Campylobacter sp.]", "diamond", "195", "51.2", "0.9921875", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter sp."], [30269124, "PRJNA564013_P_NODE_352452_length_197_cov_2.147059_g349600_i0", "PRJNA564013", "352452", "197", "2.147059", "4.22970623", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "39.7", "0.0243", "", "NR", "GAA8912035.1", "210", "g349600", "i0", "68.2", "0.33502538071066", "22", "7", "33.5", "0", "3", "68", "16", "37", "GAA8912035.1 hypothetical protein Kyoto166A_2340 [Helicobacter pylori]", "diamond", "66", "39.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30440723, "PRJNA564013_P_NODE_37873_length_627_cov_239.150177_g35193_i0", "PRJNA564013", "37873", "627", "239.150177", "1499.47160979", "Bacteria", "2", "Bacteria", "Bacteria", "44.3", "0.0463", "", "NR", "MDU9799813.1", "210", "g35193", "i0", "81.5", "0.38755980861244", "27", "5", "12.9", "0", "81", "1", "14", "40", "MDU9799813.1 hypothetical protein [Helicobacter pylori]", "diamond", "243", "44.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30647737, "PRJNA564013_P_NODE_70253_length_482_cov_2.384798_g67441_i0", "PRJNA564013", "70253", "482", "2.384798", "11.49472636", "Desulfurellales bacterium", "2482794", "Bacteria", "Bacteria", "99.8", "1.1699999999999997e-23", "", "NR", "TXH56981.1", "2482794", "g67441", "i0", "61.5", "0.485477178423237", "78", "29", "47.9", "1", "386", "156", "1", "78", "TXH56981.1 MAG: hypothetical protein E6Q97_05170 [Desulfurellales bacterium]", "diamond", "234", "99.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Desulfurellia", "Desulfurellales", null, null, "Desulfurellales bacterium"], [30774509, "PRJNA564013_P_NODE_29674_length_696_cov_6.782677_g27119_i0", "PRJNA564013", "29674", "696", "6.782677", "47.20743192", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "49.7", "1.76e-4", "", "NR", "GAA8930966.1", "210", "g27119", "i0", "69", "0.125", "29", "9", "12.5", "0", "263", "349", "14", "42", "GAA8930966.1 hypothetical protein Kyoto166A_4300 [Helicobacter pylori]", "diamond", "87", "49.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30995572, "PRJNA564013_P_NODE_268794_length_246_cov_18.562162_g265942_i0", "PRJNA564013", "268794", "246", "18.562162", "45.66291852", "Desulfurellales bacterium", "2482794", "Bacteria", "Bacteria", "53.9", "4.5e-6", "", "NR", "TXH46962.1", "2482794", "g265942", "i0", "40.7", "0.719512195121951", "59", "35", "72", "0", "241", "65", "677", "735", "TXH46962.1 MAG: hypothetical protein E6Q97_28150 [Desulfurellales bacterium]", "diamond", "177", "53.9", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Desulfurellia", "Desulfurellales", null, null, "Desulfurellales bacterium"], [31311499, "PRJNA564013_P_NODE_355435_length_195_cov_2.059701_g352583_i0", "PRJNA564013", "355435", "195", "2.059701", "4.01641695", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "47.8", "2.41e-5", "", "NR", "GAA8930966.1", "210", "g352583", "i0", "95", "0.615384615384615", "20", "1", "30.8", "0", "195", "136", "26", "45", "GAA8930966.1 hypothetical protein Kyoto166A_4300 [Helicobacter pylori]", "diamond", "120", "47.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32070763, "PRJNA564013_P_NODE_341418_length_203_cov_3.704225_g338566_i0", "PRJNA564013", "341418", "203", "3.704225", "7.51957675", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "42.4", "0.00489", "", "NR", "GAA6820949.1", "210", "g338566", "i0", "48.7", "0.901477832512315", "39", "13", "47.3", "1", "201", "106", "1", "39", "GAA6820949.1 hypothetical protein Kyoto200A_3790 [Helicobacter pylori]", "diamond", "183", "42.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32179639, "PRJNA564013_P_NODE_327138_length_210_cov_0.872483_g324286_i0", "PRJNA564013", "327138", "210", "0.872483", "1.8322143", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "72", "1.12e-12", "", "NR", "MFA6193201.1", "2022749", "g324286", "i0", "49.3", "5.91428571428571", "69", "35", "98.6", "0", "209", "3", "431", "499", "MFA6193201.1 diguanylate cyclase [Sulfurimonas sp.]", "diamond", "1242", "72", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurimonadaceae", "Sulfurimonas", "Sulfurimonas sp."], [32197405, "PRJNA564013_P_NODE_250858_length_260_cov_12.623116_g248006_i0", "PRJNA564013", "250858", "260", "12.623116", "32.8201016", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "42.4", "0.0043", "", "NR", "GAA6875668.1", "210", "g248006", "i0", "71.8", "0.45", "39", "6", "39.2", "1", "228", "127", "1", "39", "GAA6875668.1 hypothetical protein Kyoto206A_4490 [Helicobacter pylori]", "diamond", "117", "42.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32197407, "PRJNA564013_P_NODE_270898_length_245_cov_3.135870_g268046_i0", "PRJNA564013", "270898", "245", "3.13587", "7.6828815", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "41.6", "0.0241", "", "NR", "GAA8919759.1", "210", "g268046", "i0", "84.2", "0.23265306122449", "19", "3", "23.3", "0", "192", "136", "1", "19", "GAA8919759.1 hypothetical protein Kyoto166A_3640 [Helicobacter pylori]", "diamond", "57", "41.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32229188, "PRJNA564013_P_NODE_60158_length_516_cov_7.780220_g57367_i0", "PRJNA564013", "60158", "516", "7.78022", "40.1459352", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "61.2", "4.18e-9", "", "NR", "GAA9038100.1", "210", "g57367", "i0", "81.8", "0.616279069767442", "33", "6", "19.2", "0", "281", "183", "12", "44", "GAA9038100.1 hypothetical protein Kyoto184A_01000 [Helicobacter pylori]", "diamond", "318", "61.2", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32292632, "PRJNA564013_P_NODE_259679_length_253_cov_13.953125_g256827_i0", "PRJNA564013", "259679", "253", "13.953125", "35.30140625", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "42", "0.0109", "", "NR", "GAA9184181.1", "210", "g256827", "i0", "76", "0.296442687747036", "25", "6", "29.6", "0", "139", "65", "3", "27", "GAA9184181.1 hypothetical protein Kyoto193A_2860 [Helicobacter pylori]", "diamond", "75", "42", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32559440, "PRJNA564013_P_NODE_337299_length_205_cov_2.611111_g334447_i0", "PRJNA564013", "337299", "205", "2.611111", "5.35277755", "Bacteria", "2", "Bacteria", "Bacteria", "56.2", "1.3e-8", "", "NR", "GAA6899098.1", "210", "g334447", "i0", "77.4", "1.40487804878049", "31", "6", "45.4", "1", "20", "112", "7", "36", "GAA6899098.1 hypothetical protein Kyoto207A_0760 [Helicobacter pylori]", "diamond", "288", "56.6", "0.992932862190813", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32765838, "PRJNA564013_P_NODE_360880_length_191_cov_2.715385_g358028_i0", "PRJNA564013", "360880", "191", "2.715385", "5.18638535", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "55.1", "1.97e-8", "", "NR", "GAA8838853.1", "210", "g358028", "i0", "89.7", "0.455497382198953", "29", "3", "45.5", "0", "189", "103", "14", "42", "GAA8838853.1 hypothetical protein Kyoto149A_5200 [Helicobacter pylori]", "diamond", "87", "55.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 57, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA564013", "p1": "Pseudomonadati", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA564013", "label": "PRJNA564013", "count": 57, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 34, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 57, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 57, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 57, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 750.2008700103033}