{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA564013\", tax_clade = \"PVC group\" and tax_phylum = \"Chlamydiota\"", "rows": [[10060341, "PRJNA564013_P_NODE_193508_length_312_cov_5.306773_g190657_i0", "PRJNA564013", "193508", "312", "5.306773", "16.55713176", "Chlamydia", "810", "Bacteria", "Bacteria", "483", "8.729999999999998e-132", "", "NTclustered", "gi|2160499992|gb|CP042720.1|", "813", "g190657", "i0", "99.251", "85.5769230769231", "267", "2", "86", "0", "23", "289", "662119", "662385", "Chlamydia trachomatis strain TC0080-IGR-TC0081::TncL2/tetR-1645 chromosome, complete genome", "blastn", "26700", "483", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia trachomatis"], [27173867, "PRJNA564013_P_NODE_308742_length_220_cov_2.132075_g305890_i0", "PRJNA564013", "308742", "220", "2.132075", "4.690565", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "76.3", "1.25e-16", "", "NR", "MEI8125691.1", "2052176", "g305890", "i0", "90.7", "1.22727272727273", "43", "4", "58.6", "0", "130", "2", "1", "43", "MEI8125691.1 50S ribosomal protein L34 [Parachlamydiaceae bacterium]", "diamond", "270", "76.3", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [27995301, "PRJNA564013_P_NODE_22805_length_778_cov_29.422594_g20453_i0", "PRJNA564013", "22805", "778", "29.422594", "228.90778132", "Simkaniaceae bacterium", "2698248", "Bacteria", "Bacteria", "65.5", "3.43e-8", "", "NR", "MBP9841150.1", "2698248", "g20453", "i0", "42.6", "0.262210796915167", "68", "39", "26.2", "0", "513", "310", "302", "369", "MBP9841150.1 hypothetical protein [Simkaniaceae bacterium]", "diamond", "204", "65.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", null, "Simkaniaceae bacterium"], [28658428, "PRJNA564013_P_NODE_242867_length_267_cov_5.116505_g240015_i0", "PRJNA564013", "242867", "267", "5.116505", "13.66106835", "Chlamydia psittaci 1", "83554", "Bacteria", "Bacteria", "63.5", "2.81e-11", "", "NR", "EPP36750.1", "1238236", "g240015", "i0", "100", "0.314606741573034", "28", "0", "31.5", "0", "97", "14", "24", "51", "EPP36750.1 hypothetical protein CP10743SC13_2238, partial [Chlamydia psittaci 10_743_SC13]", "diamond", "84", "63.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", "Chlamydiaceae", "Chlamydia", "Chlamydia psittaci"], [30503848, "PRJNA564013_P_NODE_94853_length_419_cov_7.435754_g92020_i0", "PRJNA564013", "94853", "419", "7.435754", "31.15580926", "Chlamydiia", "204429", "Bacteria", "Bacteria", "143", "9.84e-38", "", "NR", "WP_068466327.1", "1414722", "g92020", "i0", "56.1", "8.26968973747017", "132", "51", "90.2", "3", "25", "402", "7", "137", "WP_068466327.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Candidatus Protochlamydia phocaeensis]", "diamond", "3465", "144", "0.993055555555556", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia phocaeensis"], [30788168, "PRJNA564013_P_NODE_70994_length_479_cov_10.339713_g68182_i0", "PRJNA564013", "70994", "479", "10.339713", "49.52722527", "Estrella", "483422", "Bacteria", "Bacteria", "213", "1.45e-60", "", "NR", "WP_098037575.1", "483423", "g68182", "i0", "73.3", "4.57202505219207", "146", "39", "91.4", "0", "18", "455", "545", "690", "WP_098037575.1 transcription-repair coupling factor [Estrella lausannensis]", "diamond", "2190", "213", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Criblamydiaceae", "Estrella", "Estrella lausannensis"], [31578485, "PRJNA564013_P_NODE_209896_length_297_cov_1.652542_g207045_i0", "PRJNA564013", "209896", "297", "1.652542", "4.90804974", "Bacteria", "2", "Bacteria", "Bacteria", "60.5", "1.82e-8", "", "NR", "NGX45826.1", "2081524", "g207045", "i0", "63.9", "1.57575757575758", "36", "13", "36.4", "0", "190", "297", "6", "41", "NGX45826.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "468", "60.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"]], "truncated": false, "filtered_table_rows_count": 7, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA564013", "p1": "PVC group", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA564013", "label": "PRJNA564013", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=PVC+group&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "diamond", "label": "diamond", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA564013&tax_clade=PVC+group", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 425.8958919963334}