{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA562549\", tax_clade = \"Sar\" and tax_phylum = \"Oomycota\"", "rows": [[2406287, "PRJNA562549_P_NODE_35902_length_203_cov_0.915493_g35669_i0", "PRJNA562549", "35902", "203", "0.915493", "1.85845079", "Oomycota", "4762", "SAR_Eukaryotes", "SAR_Eukaryotes", "108", "1.08e-25", "", "NR", "OQS01905.1", "74557", "g35669", "i0", "69.7", "10.7290640394089", "66", "20", "97.5", "0", "3", "200", "338", "403", "OQS01905.1 coatomer subunit beta' [Thraustotheca clavata]", "diamond", "2178", "109", "0.990825688073395", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Achlyaceae", "Thraustotheca", "Thraustotheca clavata"], [4958871, "PRJNA562549_P_NODE_16544_length_284_cov_1.170404_g16311_i0", "PRJNA562549", "16544", "284", "1.170404", "3.32394736", "Peronosporomycetes", "3418804", "SAR_Eukaryotes", "SAR_Eukaryotes", "144", "1.14e-41", "", "NR", "TMW62875.1", "41045", "g16311", "i0", "73.6", "8.67253521126761", "91", "24", "96.1", "0", "11", "283", "3", "93", "TMW62875.1 hypothetical protein Poli38472_005493 [Pythium oligandrum]", "diamond", "2463", "145", "0.993103448275862", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium oligandrum"], [6923727, "PRJNA562549_P_NODE_19046_length_266_cov_1.765854_g18813_i0", "PRJNA562549", "19046", "266", "1.765854", "4.69717164", "Saprolegniales", "4763", "SAR_Eukaryotes", "SAR_Eukaryotes", "139", "1.0599999999999998e-37", "", "NR", "OQS04692.1", "74557", "g18813", "i0", "85.2", "3.7218045112782", "81", "12", "91.4", "0", "244", "2", "1", "81", "OQS04692.1 aspartyl/Asparaginyl beta-hydroxylase [Thraustotheca clavata]", "diamond", "990", "139", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Achlyaceae", "Thraustotheca", "Thraustotheca clavata"], [8783729, "PRJNA562549_P_NODE_21227_length_253_cov_1.458333_g20994_i0", "PRJNA562549", "21227", "253", "1.458333", "3.68958249", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "265", "2.71e-66", "", "NTclustered", "gi|1917931691|gb|MT811915.1|", "82946", "g20994", "i0", "85.714", "87.7470355731225", "252", "34", "99", "2", "1", "251", "1084", "1334", "Pythium periplocum culture CBS:532.74 tubulin alpha chain (Tua) mRNA, complete cds", "blastn", "22200", "265", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium periplocum"], [10750124, "PRJNA562549_P_NODE_31609_length_211_cov_0.866667_g31376_i0", "PRJNA562549", "31609", "211", "0.866667", "1.82866737", "Peronosporaceae", "4777", "SAR_Eukaryotes", "SAR_Eukaryotes", "100", "1.05e-22", "", "NR", "XP_067821135.1", "4779", "g31376", "i0", "69.1", "5.80094786729858", "68", "21", "96.7", "0", "209", "6", "355", "422", "XP_067821135.1 hypothetical protein CCR75_001768 [Bremia lactucae]", "diamond", "1224", "101", "0.99009900990099", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Bremia", "Bremia lactucae"], [10750230, "PRJNA562549_P_NODE_8329_length_398_cov_1.477745_g8096_i0", "PRJNA562549", "8329", "398", "1.477745", "5.8814251", "Oomycota", "4762", "SAR_Eukaryotes", "SAR_Eukaryotes", "198", "1.26e-61", "", "NR", "XP_012205266.1", "695850", "g8096", "i0", "72", "58.6206030150754", "132", "37", "99.5", "0", "2", "397", "92", "223", "XP_012205266.1 guanine nucleotide-binding protein subunit beta-2-like 1 [Saprolegnia parasitica CBS 223.65]", "diamond", "23331", "199", "0.994974874371859", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Saprolegniaceae", "Saprolegnia", "Saprolegnia parasitica"], [14574654, "PRJNA562549_P_NODE_14912_length_298_cov_1.624473_g14679_i0", "PRJNA562549", "14912", "298", "1.624473", "4.84092954", "root", "1", "Root_unresolved", "Root_unresolved", "102", "5.7e-23", "", "NR", "XP_024571672.1", "4781", "g14679", "i0", "82", "4.97315436241611", "61", "11", "61.4", "0", "8", "190", "624", "684", "XP_024571672.1 polyadenylate-binding protein 1-like isoform 1 [Plasmopara halstedii]", "diamond", "1482", "103", "0.990291262135922", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Plasmopara", "Plasmopara halstedii"], [19672278, "PRJNA562549_P_NODE_32096_length_210_cov_0.872483_g31863_i0", "PRJNA562549", "32096", "210", "0.872483", "1.8322143", "Peronosporomycetes", "3418804", "SAR_Eukaryotes", "SAR_Eukaryotes", "108", "3.3500000000000006e-27", "", "NR", "TMW55108.1", "41045", "g31863", "i0", "85", "10.4142857142857", "60", "9", "85.7", "0", "188", "9", "130", "189", "TMW55108.1 hypothetical protein Poli38472_013870 [Pythium oligandrum]", "diamond", "2187", "109", "0.990825688073395", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium oligandrum"], [20947787, "PRJNA562549_P_NODE_14937_length_298_cov_1.092827_g14704_i0", "PRJNA562549", "14937", "298", "1.092827", "3.25662446", "Oomycota", "4762", "SAR_Eukaryotes", "SAR_Eukaryotes", "149", "2.7899999999999993e-43", "", "NR", "XP_024577953.1", "4781", "g14704", "i0", "77.8", "7.82214765100671", "99", "22", "99.7", "0", "298", "2", "22", "120", "XP_024577953.1 ribosomal protein s4 [Plasmopara halstedii]", "diamond", "2331", "150", "0.993333333333333", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Plasmopara", "Plasmopara halstedii"], [23498003, "PRJNA562549_P_NODE_14139_length_306_cov_1.061224_g13906_i0", "PRJNA562549", "14139", "306", "1.061224", "3.24734544", "Phytophthora infestans", "4787", "SAR_Eukaryotes", "SAR_Eukaryotes", "226", "1.59e-54", "", "NTclustered", "gi|301107276|ref|XM_002902675.1|", "403677", "g13906", "i0", "81.404", "73.921568627451", "285", "45", "92", "6", "20", "300", "592", "872", "Phytophthora infestans T30-4 adenosylhomocysteinase (PITG_10198), partial mRNA", "blastn", "22620", "226", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora infestans"], [24772026, "PRJNA562549_P_NODE_31680_length_210_cov_3.006711_g31447_i0", "PRJNA562549", "31680", "210", "3.006711", "6.3140931", "Aphanomyces euteiches", "100861", "SAR_Eukaryotes", "SAR_Eukaryotes", "220", "4.77e-53", "", "NTclustered", "gi|166047767|emb|CU362882.1|", "100861", "g31447", "i0", "92.258", "76.5333333333333", "155", "12", "74", "0", "45", "199", "98", "252", "Aphanomyces euteiches cDNA", "blastn", "16072", "220", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Verrucalvaceae", "Aphanomyces", "Aphanomyces euteiches"], [26699121, "PRJNA562549_P_NODE_29841_length_216_cov_1.612903_g29608_i0", "PRJNA562549", "29841", "216", "1.612903", "3.48387048", "Pythium oligandrum", "41045", "SAR_Eukaryotes", "SAR_Eukaryotes", "51.2", "2.01e-5", "", "NR", "TMW59429.1", "41045", "g29608", "i0", "46.5", "1.97222222222222", "71", "33", "98.6", "2", "215", "3", "164", "229", "TMW59429.1 hypothetical protein Poli38472_004498 [Pythium oligandrum]", "diamond", "426", "51.2", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium oligandrum"], [27251023, "PRJNA562549_P_NODE_36403_length_202_cov_0.921986_g36170_i0", "PRJNA562549", "36403", "202", "0.921986", "1.86241172", "Oomycota", "4762", "SAR_Eukaryotes", "SAR_Eukaryotes", "103", "7.27e-25", "", "NR", "KAG2784318.1", "29920", "g36170", "i0", "75.4", "9.08910891089109", "61", "15", "90.6", "0", "19", "201", "135", "195", "KAG2784318.1 hypothetical protein Pcac1_g5706 [Phytophthora cactorum]", "diamond", "1836", "104", "0.990384615384615", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora cactorum"], [29005924, "PRJNA562549_P_NODE_29108_length_219_cov_1.120253_g28875_i0", "PRJNA562549", "29108", "219", "1.120253", "2.45335407", "Phytophthora nicotianae", "4792", "SAR_Eukaryotes", "SAR_Eukaryotes", "69.7", "2.99e-13", "", "NR", "KUF91740.1", "4792", "g28875", "i0", "47.3", "1.01369863013699", "74", "35", "98.6", "2", "1", "216", "41", "112", "KUF91740.1 hypothetical protein AM588_10004643 [Phytophthora nicotianae]", "diamond", "222", "69.7", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora nicotianae"], [29257847, "PRJNA562549_P_NODE_21569_length_251_cov_1.957895_g21336_i0", "PRJNA562549", "21569", "251", "1.957895", "4.91431645", "Phytophthora rubi", "129364", "SAR_Eukaryotes", "SAR_Eukaryotes", "107", "2.29e-27", "", "NR", "KAE9308873.1", "129364", "g21336", "i0", "62.2", "5.8804780876494", "82", "31", "98", "0", "248", "3", "7", "88", "KAE9308873.1 hypothetical protein PR003_g20640 [Phytophthora rubi]", "diamond", "1476", "107", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Phytophthora", "Phytophthora rubi"], [29335130, "PRJNA562549_P_NODE_15089_length_296_cov_2.531915_g14856_i0", "PRJNA562549", "15089", "296", "2.531915", "7.4944684", "Oomycota", "4762", "SAR_Eukaryotes", "SAR_Eukaryotes", "129", "1.4799999999999998e-32", "", "NR", "XP_024573476.1", "4781", "g14856", "i0", "64.1", "10.0033783783784", "92", "33", "93.2", "0", "276", "1", "533", "624", "XP_024573476.1 dead deah box helicase [Plasmopara halstedii]", "diamond", "2961", "129", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Peronosporales", "Peronosporaceae", "Plasmopara", "Plasmopara halstedii"], [30724872, "PRJNA562549_P_NODE_32214_length_210_cov_0.872483_g31981_i0", "PRJNA562549", "32214", "210", "0.872483", "1.8322143", "Eukaryota", "2759", "SAR_Eukaryotes", "SAR_Eukaryotes", "90.5", "3.71e-19", "", "NR", "GLE05944.1", "114742", "g31981", "i0", "67.1", "2.01428571428571", "70", "23", "100", "0", "210", "1", "337", "406", "GLE05944.1 hypothetical protein PINS_up015155 [Pythium insidiosum]", "diamond", "423", "90.9", "0.995599559955996", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium insidiosum"], [31103942, "PRJNA562549_P_NODE_36575_length_202_cov_0.921986_g36342_i0", "PRJNA562549", "36575", "202", "0.921986", "1.86241172", "Oomycota", "4762", "SAR_Eukaryotes", "SAR_Eukaryotes", "50.8", "2.89e-5", "", "NR", "TMW66516.1", "41045", "g36342", "i0", "37.9", "6.65346534653465", "58", "36", "86.1", "0", "179", "6", "94", "151", "TMW66516.1 hypothetical protein Poli38472_004281 [Pythium oligandrum]", "diamond", "1344", "51.2", "0.9921875", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium oligandrum"], [31343142, "PRJNA562549_P_NODE_22436_length_247_cov_1.064516_g22203_i0", "PRJNA562549", "22436", "247", "1.064516", "2.62935452", "Aphanomyces astaci", "112090", "SAR_Eukaryotes", "SAR_Eukaryotes", "80.1", "6.18e-16", "", "NR", "RLO11541.1", "112090", "g22203", "i0", "48.7", "0.947368421052632", "78", "35", "94.7", "1", "236", "3", "124", "196", "RLO11541.1 hypothetical protein DYB28_000642 [Aphanomyces astaci]", "diamond", "234", "80.1", "1", "Eukaryota", "Sar", null, "Oomycota", "Saprolegniomycetes", "Saprolegniales", "Verrucalvaceae", "Aphanomyces", "Aphanomyces astaci"], [32527797, "PRJNA562549_P_NODE_24039_length_239_cov_1.460674_g23806_i0", "PRJNA562549", "24039", "239", "1.460674", "3.49101086", "Oomycota", "4762", "SAR_Eukaryotes", "SAR_Eukaryotes", "124", "3.43e-34", "", "NR", "KAJ0410394.1", "114742", "g23806", "i0", "72.7", "6.82845188284519", "77", "21", "96.7", "0", "238", "8", "51", "127", "KAJ0410394.1 hypothetical protein P43SY_002726 [Pythium insidiosum]", "diamond", "1632", "125", "0.992", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium insidiosum"], [32559420, "PRJNA562549_P_NODE_21419_length_252_cov_1.701571_g21186_i0", "PRJNA562549", "21419", "252", "1.701571", "4.28795892", "Peronosporomycetes", "3418804", "SAR_Eukaryotes", "SAR_Eukaryotes", "85.1", "4.81e-17", "", "NR", "CCI43303.1", "65357", "g21186", "i0", "62", "13.8095238095238", "71", "26", "83.3", "1", "211", "2", "409", "479", "CCI43303.1 unnamed protein product [Albugo candida]", "diamond", "3480", "85.9", "0.990686845168801", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Albuginales", "Albuginaceae", "Albugo", "Albugo candida"], [32828894, "PRJNA562549_P_NODE_31560_length_211_cov_0.866667_g31327_i0", "PRJNA562549", "31560", "211", "0.866667", "1.82866737", "Pythium insidiosum", "114742", "SAR_Eukaryotes", "SAR_Eukaryotes", "92.4", "5.47e-21", "", "NR", "KAJ0405492.1", "114742", "g31327", "i0", "57.1", "2.98578199052133", "70", "30", "99.5", "0", "2", "211", "90", "159", "KAJ0405492.1 hypothetical protein ATCC90586_000155 [Pythium insidiosum]", "diamond", "630", "92.4", "1", "Eukaryota", "Sar", null, "Oomycota", "Peronosporomycetes", "Pythiales", "Pythiaceae", "Pythium", "Pythium insidiosum"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA562549", "p1": "Sar", "p2": "Oomycota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "PRJNA562549", "label": "PRJNA562549", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Sar&tax_phylum=Oomycota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "diamond", "label": "diamond", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "Sar", "label": "Sar", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_phylum=Oomycota", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar&tax_phylum=Oomycota", "results": [{"value": "Oomycota", "label": "Oomycota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA562549&tax_clade=Sar", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 232.9060939955525}