{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA560932\" and tax_clade = \"delta/epsilon subdivisions\"", "rows": [[1820182, "PRJNA560932_P_NODE_16282_length_435_cov_1.629834_g15926_i0", "PRJNA560932", "16282", "435", "1.629834", "7.0897779", "Bradymonas sediminis", "1548548", "Bacteria", "Bacteria", "52.8", "0.042", "", "NTclustered", "gi|1406952946|gb|CP030032.1|", "1548548", "g15926", "i0", "100", "0.064367816091954", "28", "0", "6", "0", "316", "343", "2923192", "2923165", "Bradymonas sediminis strain FA350 chromosome, complete genome", "blastn", "28", "52.8", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Bradymonadaceae", "Bradymonas", "Bradymonas sediminis"], [26966414, "PRJNA560932_P_NODE_63562_length_243_cov_0.905882_g63206_i0", "PRJNA560932", "63562", "243", "0.905882", "2.20129326", "Bacteria", "2", "Bacteria", "Bacteria", "50.8", "5.29e-5", "", "NR", "OGQ89419.1", "1797895", "g63206", "i0", "41.2", "1.25925925925926", "51", "26", "63", "2", "242", "90", "1129", "1175", "OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "306", "50.8", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [28103532, "PRJNA560932_P_NODE_34745_length_308_cov_1.374468_g34389_i0", "PRJNA560932", "34745", "308", "1.374468", "4.23336144", "Bacteria", "2", "Bacteria", "Bacteria", "88.2", "9.17e-18", "", "NR", "OGQ89419.1", "1797895", "g34389", "i0", "43.2", "1.85064935064935", "95", "50", "92.5", "2", "292", "8", "1130", "1220", "OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "570", "88.2", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [28261385, "PRJNA560932_P_NODE_56146_length_248_cov_1.480000_g55790_i0", "PRJNA560932", "56146", "248", "1.48", "3.6704", "Bradymonas", "1779136", "Bacteria", "Bacteria", "89.7", "9.51e-20", "", "NR", "WP_204355067.1", "1548548", "g55790", "i0", "61.2", "4.16129032258065", "67", "25", "81", "1", "48", "248", "35", "100", "WP_204355067.1 CDP-alcohol phosphatidyltransferase family protein [Bradymonas sediminis]", "diamond", "1032", "89.7", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Bradymonadaceae", "Bradymonas", "Bradymonas sediminis"], [28608899, "PRJNA560932_P_NODE_38567_length_293_cov_0.895455_g38211_i0", "PRJNA560932", "38567", "293", "0.895455", "2.62368315", "root", "1", "Root_unresolved", "Root_unresolved", "68.2", "8.1e-11", "", "NR", "OGQ89419.1", "1797895", "g38211", "i0", "35.8", "3.35836177474403", "81", "51", "82.9", "1", "29", "271", "1185", "1264", "OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "984", "68.2", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [28672172, "PRJNA560932_P_NODE_54267_length_250_cov_0.870056_g53911_i0", "PRJNA560932", "54267", "250", "0.870056", "2.17514", "Bacteria", "2", "Bacteria", "Bacteria", "65.1", "5.45e-10", "", "NR", "OGQ89419.1", "1797895", "g53911", "i0", "38", "1.896", "79", "46", "94.8", "1", "248", "12", "1190", "1265", "OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "474", "65.1", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [29177409, "PRJNA560932_P_NODE_45609_length_271_cov_0.944444_g45253_i0", "PRJNA560932", "45609", "271", "0.944444", "2.55944324", "Bacteria", "2", "Bacteria", "Bacteria", "48.1", "6.47e-4", "", "NR", "OIP32185.1", "1805126", "g45253", "i0", "37", "2.39114391143911", "81", "41", "78.6", "4", "48", "260", "498", "578", "OIP32185.1 MAG: hypothetical protein AUK47_20995, partial [Deltaproteobacteria bacterium CG2_30_63_29]", "diamond", "648", "48.1", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG2_30_63_29"], [29587355, "PRJNA560932_P_NODE_27050_length_344_cov_2.225092_g26694_i0", "PRJNA560932", "27050", "344", "2.225092", "7.65431648", "Bacteria", "2", "Bacteria", "Bacteria", "77.4", "8.77e-14", "", "NR", "OGQ89419.1", "1797895", "g26694", "i0", "39.4", "1.72674418604651", "99", "55", "84.6", "3", "31", "321", "1187", "1282", "OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "594", "77.4", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [30472271, "PRJNA560932_P_NODE_60713_length_245_cov_0.895349_g60357_i0", "PRJNA560932", "60713", "245", "0.895349", "2.19360505", "Bacteria", "2", "Bacteria", "Bacteria", "66.2", "2.05e-10", "", "NR", "OGQ89419.1", "1797895", "g60357", "i0", "41", "1.91020408163265", "78", "44", "94.3", "2", "231", "1", "1155", "1231", "OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "468", "66.2", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [31072529, "PRJNA560932_P_NODE_27055_length_344_cov_2.114391_g26699_i0", "PRJNA560932", "27055", "344", "2.114391", "7.27350504", "Myxococcota", "2818505", "Bacteria", "Bacteria", "48.5", "0.00111", "", "NR", "OIP32185.1", "1805126", "g26699", "i0", "63.6", "3.43604651162791", "33", "12", "28.8", "0", "343", "245", "280", "312", "OIP32185.1 MAG: hypothetical protein AUK47_20995, partial [Deltaproteobacteria bacterium CG2_30_63_29]", "diamond", "1182", "48.9", "0.991820040899796", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG2_30_63_29"], [32021251, "PRJNA560932_P_NODE_17718_length_418_cov_1.115942_g17362_i0", "PRJNA560932", "17718", "418", "1.115942", "4.66463756", "Bacteria", "2", "Bacteria", "Bacteria", "101", "7.07e-22", "", "NR", "OGQ89419.1", "1797895", "g17362", "i0", "38.7", "1.96650717703349", "137", "74", "96.9", "4", "418", "14", "1148", "1276", "OGQ89419.1 MAG: hypothetical protein A2289_07420 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "822", "101", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [32260665, "PRJNA560932_P_NODE_23838_length_364_cov_0.955326_g23482_i0", "PRJNA560932", "23838", "364", "0.955326", "3.47738664", "Bradymonadaceae bacterium", "2740543", "Bacteria", "Bacteria", "79.7", "1.68e-14", "", "NR", "MFB6372782.1", "2740543", "g23482", "i0", "43.9", "0.807692307692308", "98", "51", "80.8", "2", "3", "296", "1367", "1460", "MFB6372782.1 alpha-2-macroglobulin family protein [Bradymonadaceae bacterium]", "diamond", "294", "79.7", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Bradymonadaceae", null, "Bradymonadaceae bacterium"], [32496014, "PRJNA560932_P_NODE_33239_length_314_cov_2.506224_g32883_i0", "PRJNA560932", "33239", "314", "2.506224", "7.86954336", "Myxococcota", "2818505", "Bacteria", "Bacteria", "112", "6.3200000000000006e-27", "", "NR", "OGQ90744.1", "1797895", "g32883", "i0", "56.8", "2.72292993630573", "95", "41", "90.8", "0", "28", "312", "1", "95", "OGQ90744.1 MAG: hypothetical protein A2289_26095 [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "855", "112", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [32545386, "PRJNA560932_P_NODE_28299_length_337_cov_4.814394_g27943_i0", "PRJNA560932", "28299", "337", "4.814394", "16.22450778", "Deltaproteobacteria bacterium CG2_3", "2026735", "Bacteria", "Bacteria", "121", "4.66e-32", "", "NR", "OIP38195.1", "1805126", "g27943", "i0", "65.1", "1.65578635014837", "86", "30", "76.6", "0", "260", "3", "7", "92", "OIP38195.1 MAG: hypothetical protein AUK47_12410 [Deltaproteobacteria bacterium CG2_30_63_29]", "diamond", "558", "121", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG2_30_63_29"]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 order by rowid limit 101", "params": {"p0": "PRJNA560932", "p1": "delta/epsilon subdivisions"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "PRJNA560932", "label": "PRJNA560932", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=delta%2Fepsilon+subdivisions", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "delta/epsilon subdivisions", "label": "delta/epsilon subdivisions", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA560932", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA560932&tax_clade=delta%2Fepsilon+subdivisions", "results": [], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 334.584847005317}