{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA550047\", tax_kingdom = \"Bacillati\" and tax_phylum = \"Mycoplasmatota\"", "rows": [[1788822, "PRJNA550047_P_NODE_176882_length_345_cov_2.849265_g174922_i0", "PRJNA550047", "176882", "345", "2.849265", "9.82996425", "Mycoplasmopsis felifaucium", "35768", "Bacteria", "Bacteria", "86.3", "2.38e-17", "", "NR", "WP_027334686.1", "35768", "g174922", "i0", "81.6", "8.09565217391304", "49", "9", "42.6", "0", "148", "2", "55", "103", "WP_027334686.1 recombinase RecA [Mycoplasmopsis felifaucium]", "diamond", "2793", "86.3", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis felifaucium"], [8165681, "PRJNA550047_P_NODE_140167_length_345_cov_5.356618_g138207_i0", "PRJNA550047", "140167", "345", "5.356618", "18.4803321", "Mesomycoplasma moatsii", "171287", "Bacteria", "Bacteria", "279", "1.38e-70", "", "NTclustered", "gi|2860287645|gb|CP174166.1|", "171287", "g138207", "i0", "100", "2.76231884057971", "151", "0", "88", "0", "195", "345", "179043", "178893", "Mesomycoplasma moatsii strain MK 405 chromosome, complete genome", "blastn", "953", "279", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mesomycoplasma", "Mesomycoplasma moatsii"], [8774462, "PRJNA550047_P_NODE_432747_length_253_cov_0.866667_g430775_i0", "PRJNA550047", "432747", "253", "0.866667", "2.19266751", "Ureaplasma", "2129", "Bacteria", "Bacteria", "462", "8.95e-126", "", "NTclustered", "gi|1493548740|dbj|AP018561.1|", "38504", "g430775", "i0", "99.605", "16", "253", "1", "100", "0", "1", "253", "85263", "85515", "Ureaplasma parvum serovar 3 OMC-P162 DNA, complete genome", "blastn", "4048", "462", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Ureaplasma", "Ureaplasma parvum"], [14545787, "PRJNA550047_P_NODE_469712_length_240_cov_20.329341_g467739_i0", "PRJNA550047", "469712", "240", "20.329341", "48.7904184", "Haploplasma", "2903106", "Bacteria", "Bacteria", "101", "1.1699999999999997e-23", "", "NR", "HHW79407.1", "1898209", "g467739", "i0", "70.5", "2.925", "78", "22", "97.5", "1", "237", "4", "189", "265", "HHW79407.1 tryptophan--tRNA ligase [Acholeplasmataceae bacterium]", "diamond", "702", "101", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Acholeplasmatales", "Acholeplasmataceae", null, "Acholeplasmataceae bacterium"], [18973155, "PRJNA550047_P_NODE_471195_length_240_cov_7.916168_g469222_i0", "PRJNA550047", "471195", "240", "7.916168", "18.9988032", "Ureaplasma", "2129", "Bacteria", "Bacteria", "444", "3.05e-120", "", "NTclustered", "gi|1493548740|dbj|AP018561.1|", "38504", "g469222", "i0", "100", "11", "240", "0", "100", "0", "1", "240", "123825", "123586", "Ureaplasma parvum serovar 3 OMC-P162 DNA, complete genome", "blastn", "2640", "444", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Ureaplasma", "Ureaplasma parvum"], [19642266, "PRJNA550047_P_NODE_401876_length_264_cov_8.602094_g399904_i0", "PRJNA550047", "401876", "264", "8.602094", "22.70952816", "Spiroplasma endosymbiont of 'Nebria riversi'", "2792084", "Bacteria", "Bacteria", "153", "5.62e-41", "", "NR", "WP_215826118.1", "2792084", "g399904", "i0", "87.5", "1", "88", "11", "100", "0", "1", "264", "73", "160", "WP_215826118.1 excinuclease ABC subunit UvrA [Spiroplasma endosymbiont of 'Nebria riversi']", "diamond", "264", "153", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Entomoplasmatales", "Spiroplasmataceae", "Spiroplasma", "Spiroplasma endosymbiont of 'Nebria riversi'"], [22193542, "PRJNA550047_P_NODE_462878_length_243_cov_3.405882_g460905_i0", "PRJNA550047", "462878", "243", "3.405882", "8.27629326", "Acholeplasmataceae bacterium", "1898209", "Bacteria", "Bacteria", "162", "3.26e-44", "", "NR", "NLH45207.1", "1898209", "g460905", "i0", "98.8", "0.987654320987654", "80", "1", "98.8", "0", "2", "241", "299", "378", "NLH45207.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Acholeplasmataceae bacterium]", "diamond", "240", "162", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Acholeplasmatales", "Acholeplasmataceae", null, "Acholeplasmataceae bacterium"], [22798656, "PRJNA550047_P_NODE_412218_length_260_cov_9.262032_g410246_i0", "PRJNA550047", "412218", "260", "9.262032", "24.0812832", "Ureaplasma", "2129", "Bacteria", "Bacteria", "481", "2.55e-131", "", "NTclustered", "gi|620596742|dbj|AP014584.1|", "38504", "g410246", "i0", "100", "16", "260", "0", "100", "0", "1", "260", "114057", "113798", "Ureaplasma parvum serovar 3 DNA, complete genome, strain: SV3F4", "blastn", "4160", "481", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Ureaplasma", "Ureaplasma parvum"], [26729428, "PRJNA550047_P_NODE_265321_length_300_cov_2.581498_g263352_i0", "PRJNA550047", "265321", "300", "2.581498", "7.744494", "Mycoplasmataceae bacterium", "2685873", "Bacteria", "Bacteria", "51.2", "4.36e-5", "", "NR", "MDR0985621.1", "2685873", "g263352", "i0", "31.7", "2.37", "82", "53", "82", "1", "300", "55", "122", "200", "MDR0985621.1 hypothetical protein [Mycoplasmataceae bacterium]", "diamond", "711", "51.2", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Mycoplasmatales", "Mycoplasmataceae", null, "Mycoplasmataceae bacterium"], [26776501, "PRJNA550047_P_NODE_488941_length_234_cov_7.316770_g486968_i0", "PRJNA550047", "488941", "234", "7.31677", "17.1212418", "Bacteria", "2", "Bacteria", "Bacteria", "82", "8.28e-17", "", "NR", "WP_023789067.1", "2137", "g486968", "i0", "50.6", "2.93589743589744", "77", "38", "98.7", "0", "233", "3", "24", "100", "WP_023789067.1 pseudouridine synthase [Spiroplasma apis]", "diamond", "687", "82.8", "0.990338164251208", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Entomoplasmatales", "Spiroplasmataceae", "Spiroplasma", "Spiroplasma apis"], [27962448, "PRJNA550047_P_NODE_308485_length_296_cov_7.542601_g306516_i0", "PRJNA550047", "308485", "296", "7.542601", "22.32609896", "Candidatus Izemoplasmatales bacterium", "3018265", "Bacteria", "Bacteria", "80.9", "2.77e-15", "", "NR", "MFA5037076.1", "3018265", "g306516", "i0", "36.7", "0.993243243243243", "98", "61", "99.3", "1", "294", "1", "451", "547", "MFA5037076.1 hypothetical protein [Candidatus Izemoplasmatales bacterium]", "diamond", "294", "80.9", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Candidatus Izemoplasmatales", null, null, "Candidatus Izemoplasmatales bacterium"], [28183173, "PRJNA550047_P_NODE_180286_length_345_cov_2.544118_g178326_i0", "PRJNA550047", "180286", "345", "2.544118", "8.7772071", "Paracholeplasma morum", "264637", "Bacteria", "Bacteria", "85.5", "1.04e-17", "", "NR", "WP_204433177.1", "264637", "g178326", "i0", "82", "0.434782608695652", "50", "9", "43.5", "0", "344", "195", "155", "204", "WP_204433177.1 deoxyribose-phosphate aldolase [Paracholeplasma morum]", "diamond", "150", "85.5", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Acholeplasmatales", "Acholeplasmataceae", "Paracholeplasma", "Paracholeplasma morum"], [28751778, "PRJNA550047_P_NODE_352227_length_284_cov_7.246445_g350256_i0", "PRJNA550047", "352227", "284", "7.246445", "20.5799038", "Spiroplasma endosymbiont of 'Nebria riversi'", "2792084", "Bacteria", "Bacteria", "95.5", "1.78e-20", "", "NR", "WP_215826922.1", "2792084", "g350256", "i0", "56.5", "0.971830985915493", "92", "36", "94", "2", "6", "272", "266", "356", "WP_215826922.1 ABC transporter permease [Spiroplasma endosymbiont of 'Nebria riversi']", "diamond", "276", "95.5", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Entomoplasmatales", "Spiroplasmataceae", "Spiroplasma", "Spiroplasma endosymbiont of 'Nebria riversi'"], [28909455, "PRJNA550047_P_NODE_460268_length_243_cov_23.582353_g458295_i0", "PRJNA550047", "460268", "243", "23.582353", "57.30511779", "Spiroplasma endosymbiont of 'Nebria riversi'", "2792084", "Bacteria", "Bacteria", "91.7", "2.34e-19", "", "NR", "WP_215826118.1", "2792084", "g458295", "i0", "59.1", "0.814814814814815", "66", "27", "81.5", "0", "243", "46", "152", "217", "WP_215826118.1 excinuclease ABC subunit UvrA [Spiroplasma endosymbiont of 'Nebria riversi']", "diamond", "198", "91.7", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Entomoplasmatales", "Spiroplasmataceae", "Spiroplasma", "Spiroplasma endosymbiont of 'Nebria riversi'"], [30646607, "PRJNA550047_P_NODE_522433_length_223_cov_5.893333_g520460_i0", "PRJNA550047", "522433", "223", "5.893333", "13.14213259", "Candidatus Phytoplasma australasiaticum", "2754999", "Bacteria", "Bacteria", "75.1", "1.16e-15", "", "NR", "MDV3184949.1", "2754999", "g520460", "i0", "77.3", "0.591928251121076", "44", "10", "59.2", "0", "134", "3", "12", "55", "MDV3184949.1 hypothetical protein [Candidatus Phytoplasma australasiaticum]", "diamond", "132", "75.1", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Acholeplasmatales", "Acholeplasmataceae", "Candidatus Phytoplasma", "Candidatus Phytoplasma australasiaticum"], [31831017, "PRJNA550047_P_NODE_517857_length_224_cov_14.158940_g515884_i0", "PRJNA550047", "517857", "224", "14.15894", "31.7160256", "Spiroplasma", "2132", "Bacteria", "Bacteria", "93.2", "1.23e-20", "", "NR", "WP_342224010.1", "3066281", "g515884", "i0", "67.6", "1.82142857142857", "68", "22", "91.1", "0", "11", "214", "101", "168", "WP_342224010.1 ABC transporter substrate-binding protein [Spiroplasma endosymbiont of Asaphidion curtum]", "diamond", "408", "93.2", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Entomoplasmatales", "Spiroplasmataceae", "Spiroplasma", "Spiroplasma endosymbiont of Asaphidion curtum"], [32386094, "PRJNA550047_P_NODE_527119_length_221_cov_10.851351_g525146_i0", "PRJNA550047", "527119", "221", "10.851351", "23.98148571", "Acholeplasmatales bacterium", "2053494", "Bacteria", "Bacteria", "71.6", "1.83e-12", "", "NR", "MCR5706322.1", "2053494", "g525146", "i0", "50.7", "6.43438914027149", "71", "35", "96.4", "0", "2", "214", "73", "143", "MCR5706322.1 anaerobic ribonucleoside-triphosphate reductase [Acholeplasmatales bacterium]", "diamond", "1422", "71.6", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Acholeplasmatales", null, null, "Acholeplasmatales bacterium"]], "truncated": false, "filtered_table_rows_count": 17, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_kingdom\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA550047", "p1": "Bacillati", "p2": "Mycoplasmatota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota", "results": [{"value": "PRJNA550047", "label": "PRJNA550047", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota&analysis=diamond", "selected": false}, {"value": "blastn", "label": "blastn", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota&analysis=blastn", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_phylum=Mycoplasmatota", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati&tax_phylum=Mycoplasmatota", "results": [{"value": "Mycoplasmatota", "label": "Mycoplasmatota", "count": 17, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA550047&tax_kingdom=Bacillati", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 586.8440140038729}