{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA509429\", tax_clade = \"Discoba\" and tax_phylum = \"Heterolobosea\"", "rows": [[3036392, "PRJNA509429_P_NODE_5183_length_635_cov_3.786667_g4509_i0", "PRJNA509429", "5183", "635", "3.786667", "24.04533545", "Naegleria gruberi", "5762", "Heterolobosea", "other_Eukaryota", "1018", "0", "", "NTclustered", "gi|11466174|ref|NC_002573.1|", "5762", "g4509", "i0", "95.597", "86.2944881889764", "636", "27", "100", "1", "1", "635", "955", "320", "Naegleria gruberi mitochondrion, complete genome", "blastn", "54797", "1018", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [4312216, "PRJNA509429_P_NODE_6704_length_563_cov_19.964015_g5952_i0", "PRJNA509429", "6704", "563", "19.964015", "112.39740445", "Naegleria australiensis", "51634", "Heterolobosea", "other_Eukaryota", "977", "0", "", "NTclustered", "gi|32479131|gb|AY321362.1|", "51634", "g5952", "i0", "98.046", "98.4245115452931", "563", "9", "100", "1", "1", "563", "640", "1200", "Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence", "blastn", "55413", "977", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria australiensis"], [6214231, "PRJNA509429_P_NODE_18965_length_312_cov_34.046931_g18137_i0", "PRJNA509429", "18965", "312", "34.046931", "106.22642472", "Naegleria", "5761", "Heterolobosea", "other_Eukaryota", "560", "3.92e-155", "", "NTclustered", "gi|2618963742|gb|OR769034.1|", "5762", "g18137", "i0", "99.038", "10.1346153846154", "312", "3", "100", "0", "1", "312", "5792", "5481", "Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence", "blastn", "3162", "560", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [9413341, "PRJNA509429_P_NODE_25508_length_253_cov_4.935780_g24680_i0", "PRJNA509429", "25508", "253", "4.93578", "12.4875234", "Naegleria gruberi", "5762", "Heterolobosea", "other_Eukaryota", "424", "4.22e-114", "", "NTclustered", "gi|11466174|ref|NC_002573.1|", "5762", "g24680", "i0", "96.838", "47.0553359683794", "253", "8", "100", "0", "1", "253", "1737", "1485", "Naegleria gruberi mitochondrion, complete genome", "blastn", "11905", "424", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [9413474, "PRJNA509429_P_NODE_7888_length_519_cov_4.126033_g7099_i0", "PRJNA509429", "7888", "519", "4.126033", "21.41411127", "Naegleria gruberi", "5762", "Heterolobosea", "other_Eukaryota", "898", "0", "", "NTclustered", "gi|11466174|ref|NC_002573.1|", "5762", "g7099", "i0", "97.881", "38.626204238921", "519", "11", "100", "0", "1", "519", "1479", "961", "Naegleria gruberi mitochondrion, complete genome", "blastn", "20047", "898", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [11313937, "PRJNA509429_P_NODE_3869_length_726_cov_95.062229_g1266_i1", "PRJNA509429", "3869", "726", "95.062229", "690.15178254", "Naegleria", "5761", "Heterolobosea", "other_Eukaryota", "1171", "0", "", "NTclustered", "gi|2618963742|gb|OR769034.1|", "5762", "g1266", "i1", "97.791", "31.3195592286501", "679", "15", "94", "0", "1", "679", "3023", "2345", "Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence", "blastn", "22738", "1171", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [11313969, "PRJNA509429_P_NODE_8009_length_515_cov_22.841667_g7218_i0", "PRJNA509429", "8009", "515", "22.841667", "117.63458505", "Naegleria", "5761", "Heterolobosea", "other_Eukaryota", "952", "0", "", "NTclustered", "gi|2351569|gb|U80057.1|NAU80057", "5764", "g7218", "i0", "100", "99.5669902912621", "515", "0", "100", "0", "1", "515", "696", "1210", "Naegleria andersoni 18S ribosomal RNA gene, partial sequence", "blastn", "51277", "952", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria andersoni"], [12589706, "PRJNA509429_P_NODE_27210_length_241_cov_4.699029_g26382_i0", "PRJNA509429", "27210", "241", "4.699029", "11.32465989", "Naegleria", "5761", "Heterolobosea", "other_Eukaryota", "429", "8.58e-116", "", "NTclustered", "gi|2651357780|gb|PP174296.1|", "36333", "g26382", "i0", "98.755", "24.8008298755187", "241", "3", "100", "0", "1", "241", "4060", "3820", "Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence", "blastn", "5977", "429", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria clarki"], [12589754, "PRJNA509429_P_NODE_9610_length_470_cov_3.416092_g8798_i0", "PRJNA509429", "9610", "470", "3.416092", "16.0556324", "Naegleria", "5761", "Heterolobosea", "other_Eukaryota", "763", "0", "", "NTclustered", "gi|38606345|gb|AY376153.1|", "5762", "g8798", "i0", "95.966", "64.7914893617021", "471", "18", "100", "1", "1", "470", "869", "399", "Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial", "blastn", "30452", "763", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [15787915, "PRJNA509429_P_NODE_22373_length_279_cov_1.639344_g21545_i0", "PRJNA509429", "22373", "279", "1.639344", "4.57376976", "Parafumarolamoeba stagnalis", "2872509", "Heterolobosea", "other_Eukaryota", "496", "9.88e-136", "", "NTclustered", "gi|2086087549|gb|MZ919148.1|", "2872509", "g21545", "i0", "98.917", "8.86021505376344", "277", "3", "99", "0", "1", "277", "721", "997", "Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence", "blastn", "2472", "496", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Parafumarolamoeba", "Parafumarolamoeba stagnalis"], [17062489, "PRJNA509429_P_NODE_10794_length_440_cov_2.708642_g9977_i0", "PRJNA509429", "10794", "440", "2.708642", "11.9180248", "Naegleria gruberi", "5762", "Heterolobosea", "other_Eukaryota", "736", "0", "", "NTclustered", "gi|11466174|ref|NC_002573.1|", "5762", "g9977", "i0", "96.818", "18.9477272727273", "440", "14", "100", "0", "1", "440", "48275", "48714", "Naegleria gruberi mitochondrion, complete genome", "blastn", "8337", "736", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [22161957, "PRJNA509429_P_NODE_1618_length_1076_cov_69.621518_g1266_i0", "PRJNA509429", "1618", "1076", "69.621518", "749.12753368", "Naegleria gruberi", "5762", "Heterolobosea", "other_Eukaryota", "1644", "0", "", "NTclustered", "gi|2618963742|gb|OR769034.1|", "5762", "g1266", "i0", "95.45", "35.8289962825279", "1033", "43", "96", "3", "48", "1076", "2345", "3377", "Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence", "blastn", "38552", "1644", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria gruberi"], [22161992, "PRJNA509429_P_NODE_2958_length_822_cov_19.321474_g2440_i0", "PRJNA509429", "2958", "822", "19.321474", "158.82251628", "Naegleria pringsheimi", "234921", "Heterolobosea", "other_Eukaryota", "1275", "0", "", "NTclustered", "gi|2515557648|gb|OR045415.1|", "234921", "g2440", "i0", "94.775", "24.4221411192214", "823", "35", "100", "7", "1", "822", "5143", "5958", "Naegleria pringsheimi strain Singh(s) rDNA-containing extrachromosomal element genomic sequence; 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence", "blastn", "20075", "1275", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria pringsheimi"], [23437724, "PRJNA509429_P_NODE_47599_length_159_cov_2.298387_g46771_i0", "PRJNA509429", "47599", "159", "2.298387", "3.65443533", "Naegleria fowleri", "5763", "Heterolobosea", "other_Eukaryota", "156", "9.75e-34", "", "NTclustered", "gi|2031943399|emb|OD958269.1|", "5763", "g46771", "i0", "84.906", "34.0691823899371", "159", "19", "97", "5", "1", "155", "158", "1", "Naegleria fowleri Karachi_NF001 strain", "blastn", "5417", "156", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria fowleri"], [24711216, "PRJNA509429_P_NODE_28880_length_231_cov_2.913265_g28052_i0", "PRJNA509429", "28880", "231", "2.913265", "6.72964215", "Naegleria lovaniensis", "51637", "Heterolobosea", "other_Eukaryota", "292", "1.12e-74", "", "NTclustered", "gi|2719226838|gb|PP695237.1|", "51637", "g28052", "i0", "89.407", "9.17748917748918", "236", "20", "100", "2", "1", "231", "2787", "3022", "Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence", "blastn", "2120", "292", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria lovaniensis"], [27772343, "PRJNA509429_P_NODE_45384_length_165_cov_1.230769_g44556_i0", "PRJNA509429", "45384", "165", "1.230769", "2.03076885", "Naegleria lovaniensis", "51637", "Heterolobosea", "other_Eukaryota", "63.9", "1.48e-11", "", "NR", "XP_044541690.1", "51637", "g44556", "i0", "68.1", "0.854545454545454", "47", "15", "85.5", "0", "143", "3", "1", "47", "XP_044541690.1 uncharacterized protein C9374_013830 [Naegleria lovaniensis]", "diamond", "141", "63.9", "1", "Eukaryota", "Discoba", null, "Heterolobosea", null, null, "Vahlkampfiidae", "Naegleria", "Naegleria lovaniensis"]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_clade\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA509429", "p1": "Discoba", "p2": "Heterolobosea"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea", "results": [{"value": "PRJNA509429", "label": "PRJNA509429", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_clade=Discoba&tax_phylum=Heterolobosea", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea", "results": [{"value": "blastn", "label": "blastn", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea", "results": [{"value": "Discoba", "label": "Discoba", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_phylum=Heterolobosea", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba&tax_phylum=Heterolobosea", "results": [{"value": "Heterolobosea", "label": "Heterolobosea", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA509429&tax_clade=Discoba", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 298.6785169923678}