{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where bioproject = \"PRJNA495391\", tax_phylum = \"Kitrinoviricota\" and tax_superkingdom = \"Viruses\"", "rows": [[477289, "PRJNA495391_S_NODE_70681_length_150_cov_2.165217_g69629_i0", "PRJNA495391", "70681", "150", "2.165217", "3.2478255", "Potexvirus trifolii", "3433859", "Viruses", "Viruses", "267", "4.009999999999999e-67", "", "NTclustered", "gi|564614830|gb|KF421939.1|", "12188", "g69629", "i0", "98.667", "33.84", "150", "2", "100", "0", "1", "150", "5248", "5397", "White clover mosaic virus isolate 05TGP00172 putative RNA replicase, putative triple gene block protein 1, putative triple gene block protein 2, putative triple gene block protein 3, and putative coat protein genes, complete cds", "blastn", "5076", "267", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Alsuviricetes", "Tymovirales", "Alphaflexiviridae", "Potexvirus", "Potexvirus trifolii"], [1750855, "PRJNA495391_S_NODE_19642_length_271_cov_1.644068_g18590_i0", "PRJNA495391", "19642", "271", "1.644068", "4.45542428", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "451", "2.0999999999999997e-122", "", "NTclustered", "gi|380719829|gb|JQ071528.1|", "11099", "g18590", "i0", "96.679", "99.3579335793358", "271", "9", "100", "0", "1", "271", "16", "286", "Bovine viral diarrhea virus 1 strain GS2 polyprotein gene, partial cds", "blastn", "26926", "451", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [1750900, "PRJNA495391_S_NODE_2142_length_949_cov_11.221007_g1285_i0", "PRJNA495391", "2142", "949", "11.221007", "106.48735643", "Pestivirus brazilense", "3052620", "Viruses", "Viruses", "1642", "0", "", "NTclustered", "gi|2813517649|gb|PQ362002.1|", "381707", "g1285", "i0", "97.803", "66.4257112750263", "956", "13", "99", "4", "2", "949", "1017", "62", "Bovine viral diarrhea virus 3 isolate HN2009, partial genome", "blastn", "63038", "1642", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus brazilense"], [1751225, "PRJNA495391_S_NODE_33102_length_211_cov_3.125000_g32050_i0", "PRJNA495391", "33102", "211", "3.125", "6.59375", "Erysiphe necator associated deltaflexivirus 4", "2743097", "Viruses", "Viruses", "390", "3.459999999999999e-104", "", "NTclustered", "gi|2288523299|gb|ON811606.1|", "2743097", "g32050", "i0", "100", "1.51184834123223", "211", "0", "100", "0", "1", "211", "6837", "7047", "MAG: Erysiphe necator associated deltaflexivirus 4 isolate TIGMIC_2, complete genome", "blastn", "319", "390", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Alsuviricetes", "Tymovirales", "Deltaflexiviridae", "Deltaflexivirus", "Erysiphe necator associated deltaflexivirus 4"], [1751329, "PRJNA495391_S_NODE_36982_length_201_cov_1.542169_g35930_i0", "PRJNA495391", "36982", "201", "1.542169", "3.09975969", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "333", "5.569999999999999e-87", "", "NTclustered", "gi|2440740783|gb|ON411191.1|", "11099", "g35930", "i0", "96.517", "22.9800995024876", "201", "7", "100", "0", "1", "201", "9588", "9388", "Bovine viral diarrhea virus 1 isolate 21NM-44 polyprotein gene, complete cds", "blastn", "4619", "333", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [8129835, "PRJNA495391_S_NODE_51747_length_172_cov_1.737226_g50695_i0", "PRJNA495391", "51747", "172", "1.737226", "2.98802872", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "278", "2.19e-70", "", "NTclustered", "gi|586616531|gb|KF896608.1|", "11099", "g50695", "i0", "95.906", "95.8662790697674", "171", "7", "99", "0", "2", "172", "6754", "6924", "Bovine viral diarrhea virus 1 isolate Bega-like polyprotein gene, complete cds", "blastn", "16489", "278", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [10679312, "PRJNA495391_S_NODE_11089_length_360_cov_5.092308_g10037_i0", "PRJNA495391", "11089", "360", "5.092308", "18.3323088", "Potexvirus trifolii", "3433859", "Viruses", "Viruses", "612", "1.2499999999999997e-170", "", "NTclustered", "gi|2054359742|gb|MW248353.1|", "12188", "g10037", "i0", "97.486", "30.1361111111111", "358", "9", "99", "0", "3", "360", "5843", "5486", "White clover mosaic virus isolate DSMZ PV-0310 replication-associated protein (ORF1), triple gene block 1 protein (ORF2), triple gene block 2 protein (ORF3), triple gene block 3 protein (ORF4), and capsid protein (ORF5) genes, complete cds", "blastn", "10849", "612", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Alsuviricetes", "Tymovirales", "Alphaflexiviridae", "Potexvirus", "Potexvirus trifolii"], [10679912, "PRJNA495391_S_NODE_32829_length_212_cov_2.435028_g31777_i0", "PRJNA495391", "32829", "212", "2.435028", "5.16225936", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "331", "2.1400000000000006e-86", "", "NTclustered", "gi|2448011657|gb|ON624287.1|", "11099", "g31777", "i0", "94.811", "97.3349056603774", "212", "11", "100", "0", "1", "212", "7146", "7357", "Bovine viral diarrhea virus 1 isolate 21SD-16 polyprotein gene, complete cds", "blastn", "20635", "331", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [15778400, "PRJNA495391_S_NODE_14333_length_316_cov_2.362989_g13281_i0", "PRJNA495391", "14333", "316", "2.362989", "7.46704524", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "464", "3.2099999999999996e-126", "", "NTclustered", "gi|2449445617|gb|OQ348280.1|", "11099", "g13281", "i0", "92.722", "61.1170886075949", "316", "23", "100", "0", "1", "316", "8405", "8720", "MAG: Bovine viral diarrhea virus 1 isolate ASRA5 polyprotein gene, partial cds", "blastn", "19313", "464", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [15779824, "PRJNA495391_S_NODE_68173_length_153_cov_1.144068_g67121_i0", "PRJNA495391", "68173", "153", "1.144068", "1.75042404", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "241", "2.49e-59", "", "NTclustered", "gi|1831805881|emb|LR760748.1|", "11099", "g67121", "i0", "95.364", "34.8496732026144", "151", "7", "99", "0", "3", "153", "1945", "1795", "Bovine viral diarrhea virus 1 complete genome gene for viral polyprotein", "blastn", "5332", "241", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [18327845, "PRJNA495391_S_NODE_29595_length_222_cov_2.711230_g28543_i0", "PRJNA495391", "29595", "222", "2.71123", "6.0189306", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "313", "8.18e-81", "", "NTclustered", "gi|2905035930|gb|PQ782224.1|", "11099", "g28543", "i0", "91.964", "28.3513513513514", "224", "16", "100", "2", "1", "222", "10534", "10311", "Bovine viral diarrhea virus 1 isolate BVDV-1c-IM-2018, complete genome", "blastn", "6294", "313", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [18328280, "PRJNA495391_S_NODE_46075_length_181_cov_3.095890_g45023_i0", "PRJNA495391", "46075", "181", "3.09589", "5.6035609", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "285", "1.39e-72", "", "NTclustered", "gi|2429573847|gb|ON098979.1|", "11099", "g45023", "i0", "95.028", "82.4585635359116", "181", "9", "100", "0", "1", "181", "8055", "8235", "Bovine viral diarrhea virus 1 isolate 21NX-300, complete genome", "blastn", "14925", "285", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [18958738, "PRJNA495391_S_NODE_25755_length_237_cov_3.069307_g24703_i0", "PRJNA495391", "25755", "237", "3.069307", "7.27425759", "root", "1", "Root_unresolved", "Root_unresolved", "383", "6.64e-102", "", "NTclustered", "gi|1129880669|gb|KX170702.1|", "11099", "g24703", "i0", "95.781", "99.4725738396624", "237", "10", "100", "0", "1", "237", "850", "614", "Bovine viral diarrhea virus 1 isolate V008 NS5B gene, partial cds", "blastn", "23575", "383", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [20877575, "PRJNA495391_S_NODE_1477_length_1260_cov_4.899592_g713_i0", "PRJNA495391", "1477", "1260", "4.899592", "61.7348592", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "1733", "0", "", "NTclustered", "gi|2563906172|gb|ON732849.1|", "11099", "g713", "i0", "91.515", "80.7150793650794", "1261", "104", "100", "3", "1", "1260", "10421", "9163", "Bovine viral diarrhea virus 1 isolate SDJN01, complete genome", "blastn", "101701", "1733", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [20879136, "PRJNA495391_S_NODE_8457_length_416_cov_2.556430_g7406_i0", "PRJNA495391", "8457", "416", "2.55643", "10.6347488", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "625", "1.8799999999999998e-174", "", "NTclustered", "gi|2563906172|gb|ON732849.1|", "11099", "g7406", "i0", "93.75", "44.1129807692308", "416", "26", "100", "0", "1", "416", "8815", "8400", "Bovine viral diarrhea virus 1 isolate SDJN01, complete genome", "blastn", "18351", "625", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [22153846, "PRJNA495391_S_NODE_71138_length_150_cov_1.382609_g70086_i0", "PRJNA495391", "71138", "150", "1.382609", "2.0739135", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "265", "1.44e-66", "", "NTclustered", "gi|2905035930|gb|PQ782224.1|", "11099", "g70086", "i0", "98.658", "23.98", "149", "2", "99", "0", "1", "149", "8664", "8812", "Bovine viral diarrhea virus 1 isolate BVDV-1c-IM-2018, complete genome", "blastn", "3597", "265", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [23428475, "PRJNA495391_S_NODE_25559_length_238_cov_2.650246_g24507_i0", "PRJNA495391", "25559", "238", "2.650246", "6.30758548", "Pestivirus bovis", "3052619", "Viruses", "Viruses", "348", "2.4300000000000005e-91", "", "NTclustered", "gi|1831805881|emb|LR760748.1|", "11099", "g24507", "i0", "92.917", "51.6554621848739", "240", "15", "100", "1", "1", "238", "7982", "7743", "Bovine viral diarrhea virus 1 complete genome gene for viral polyprotein", "blastn", "12294", "348", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus bovis"], [23429602, "PRJNA495391_S_NODE_68039_length_153_cov_1.338983_g66987_i0", "PRJNA495391", "68039", "153", "1.338983", "2.04864399", "Pestivirus brazilense", "3052620", "Viruses", "Viruses", "272", "8.84e-69", "", "NTclustered", "gi|2813517655|gb|PQ362005.1|", "381707", "g66987", "i0", "98.693", "29.9738562091503", "153", "2", "100", "0", "1", "153", "9630", "9782", "Bovine viral diarrhea virus 3 isolate HN2247, partial genome", "blastn", "4586", "272", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Flasuviricetes", "Amarillovirales", "Flaviviridae", "Pestivirus", "Pestivirus brazilense"], [27614230, "PRJNA495391_S_NODE_50364_length_174_cov_2.007194_g49312_i0", "PRJNA495391", "50364", "174", "2.007194", "3.49251756", "Erysiphe necator associated flexivirus 3", "2743100", "Viruses", "Viruses", "123", "7.019999999999999e-31", "", "NR", "QKN22675.1", "2743100", "g49312", "i0", "96.5", "0.982758620689655", "57", "2", "98.3", "0", "3", "173", "1751", "1807", "QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3]", "diamond", "171", "123", "1", "Viruses", null, "Orthornavirae", "Kitrinoviricota", "Alsuviricetes", "Tymovirales", null, null, "Erysiphe necator associated flexivirus 3"]], "truncated": false, "filtered_table_rows_count": 19, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"bioproject\" = :p0 and \"tax_phylum\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "PRJNA495391", "p1": "Kitrinoviricota", "p2": "Viruses"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses", "results": [{"value": "PRJNA495391", "label": "PRJNA495391", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses", "results": [{"value": "blastn", "label": "blastn", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses&analysis=blastn", "selected": false}, {"value": "diamond", "label": "diamond", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses&analysis=diamond", "selected": false}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses", "results": [{"value": "Viruses", "label": "Viruses", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses", "results": [{"value": "Orthornavirae", "label": "Orthornavirae", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses&tax_kingdom=Orthornavirae", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_phylum=Kitrinoviricota&tax_superkingdom=Viruses", "results": [{"value": "Kitrinoviricota", "label": "Kitrinoviricota", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA495391&tax_superkingdom=Viruses", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 189.62023800122552}